RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 AKAP5P24588 427 aa23.25■■□□□ 1.31
CHD9-208ENST00000563410 MCM7P33993 719 aa23.25■■□□□ 1.31
CHD9-208ENST00000563410 GUCY1B3Q02153 619 aa23.25■■□□□ 1.31
CHD9-208ENST00000563410 SLC27A1Q6PCB7 646 aa23.25■■□□□ 1.31
CHD9-208ENST00000563410 TRIM6Q9C030 488 aaPredicted RBP23.25■■□□□ 1.31
CHD9-208ENST00000563410 TRIP11Q15643 1979 aa23.25■■□□□ 1.31
CHD9-208ENST00000563410 TEX28O15482 410 aa23.24■■□□□ 1.31
CHD9-208ENST00000563410 NPTXRO95502 500 aa23.24■■□□□ 1.31
CHD9-208ENST00000563410 ATP2B1P20020 1258 aa23.24■■□□□ 1.31
CHD9-208ENST00000563410 GLUD2P49448 558 aa23.24■■□□□ 1.31
CHD9-208ENST00000563410 C15orf39Q6ZRI6 1047 aa23.24■■□□□ 1.31
CHD9-208ENST00000563410 MAEAQ7L5Y9 396 aa23.24■■□□□ 1.31
CHD9-208ENST00000563410 RXFP1Q9HBX9 757 aa23.24■■□□□ 1.31
CHD9-208ENST00000563410 TUFT1Q9NNX1 390 aa23.24■■□□□ 1.31
CHD9-208ENST00000563410 MAN1C1Q9NR34 630 aa23.24■■□□□ 1.31
CHD9-208ENST00000563410 SSX2IPQ9Y2D8 614 aa23.24■■□□□ 1.31
CHD9-208ENST00000563410 DOCK6Q96HP0 2047 aa23.24■■□□□ 1.31
CHD9-208ENST00000563410 DMDP11532 3685 aa23.24■■□□□ 1.31
CHD9-208ENST00000563410 SPDYE4A6NLX3 237 aa23.23■■□□□ 1.31
CHD9-208ENST00000563410 DSG1Q02413 1049 aa23.23■■□□□ 1.31
CHD9-208ENST00000563410 CDCA2Q69YH5 1023 aaPredicted RBP23.23■■□□□ 1.31
CHD9-208ENST00000563410 PPP4R3CPQ6ZMV5 832 aa23.23■■□□□ 1.31
CHD9-208ENST00000563410 CCDC149Q6ZUS6 474 aa23.23■■□□□ 1.31
CHD9-208ENST00000563410 CHST7Q9NS84 486 aa23.23■■□□□ 1.31
CHD9-208ENST00000563410 LRRIQ4A6NIV6 560 aa23.22■■□□□ 1.31
CHD9-208ENST00000563410 ADH1AP07327 375 aa23.22■■□□□ 1.31
CHD9-208ENST00000563410 HACE1Q8IYU2 909 aa23.22■■□□□ 1.31
CHD9-208ENST00000563410 CMASQ8NFW8 434 aaPredicted RBP23.22■■□□□ 1.31
CHD9-208ENST00000563410 POLR3CQ9BUI4 534 aaPredicted RBP23.22■■□□□ 1.31
CHD9-208ENST00000563410 COLEC11Q9BWP8 271 aa23.22■■□□□ 1.31
CHD9-208ENST00000563410 GPR62Q9BZJ7 368 aa23.22■■□□□ 1.31
CHD9-208ENST00000563410 FZD8Q9H461 694 aa23.22■■□□□ 1.31
CHD9-208ENST00000563410 KLK14Q9P0G3 267 aa23.22■■□□□ 1.31
CHD9-208ENST00000563410 ZMYM2Q9UBW7 1377 aa23.22■■□□□ 1.31
CHD9-208ENST00000563410 TTLL13PA6NNM8 815 aa23.21■■□□□ 1.31
CHD9-208ENST00000563410 FAM187BQ17R55 369 aa23.21■■□□□ 1.31
CHD9-208ENST00000563410 ERICH6BQ5W0A0 696 aa23.21■■□□□ 1.31
CHD9-208ENST00000563410 FUT10Q6P4F1 479 aa23.21■■□□□ 1.31
CHD9-208ENST00000563410 POTEGQ6S5H5 508 aa23.21■■□□□ 1.31
CHD9-208ENST00000563410 CCDC83Q8IWF9 413 aa23.21■■□□□ 1.31
CHD9-208ENST00000563410 MCPH1Q8NEM0 835 aa23.21■■□□□ 1.31
CHD9-208ENST00000563410 BSNDQ8WZ55 320 aa23.21■■□□□ 1.31
CHD9-208ENST00000563410 ACSF2Q96CM8 615 aaPredicted RBP23.21■■□□□ 1.31
CHD9-208ENST00000563410 B3GALT6Q96L58 329 aa23.21■■□□□ 1.31
CHD9-208ENST00000563410 PRIMPOLQ96LW4 560 aa23.21■■□□□ 1.31
CHD9-208ENST00000563410 NACC1Q96RE7 527 aa23.21■■□□□ 1.31
CHD9-208ENST00000563410 PRMT7Q9NVM4 692 aaPredicted RBP23.21■■□□□ 1.31
CHD9-208ENST00000563410 PARP2Q9UGN5 583 aa23.21■■□□□ 1.31
CHD9-208ENST00000563410 VWA8A3KMH1 1905 aa23.21■■□□□ 1.31
CHD9-208ENST00000563410 NR1I2O75469 434 aa23.2■■□□□ 1.3
CHD9-208ENST00000563410 GLUD1P00367 558 aa23.2■■□□□ 1.3
CHD9-208ENST00000563410 GRIK3Q13003 919 aa23.2■■□□□ 1.3
CHD9-208ENST00000563410 SAFBQ15424 915 aaKnown RBP eCLIP23.2■■□□□ 1.3
CHD9-208ENST00000563410 ZNF174Q15697 407 aa23.2■■□□□ 1.3
CHD9-208ENST00000563410 OTOP3Q7RTS5 596 aa23.2■■□□□ 1.3
CHD9-208ENST00000563410 RABGGTAQ92696 567 aa23.2■■□□□ 1.3
CHD9-208ENST00000563410 C8orf76Q96K31 380 aa23.2■■□□□ 1.3
CHD9-208ENST00000563410 CACNG4Q9UBN1 327 aa23.2■■□□□ 1.3
CHD9-208ENST00000563410 LIMCH1Q9UPQ0 1083 aa23.2■■□□□ 1.3
CHD9-208ENST00000563410 CCDC195A0A1B0GUA6 201 aa23.19■■□□□ 1.3
CHD9-208ENST00000563410 N4BP1O75113 896 aaKnown RBP23.19■■□□□ 1.3
CHD9-208ENST00000563410 OR52Z1P0C646 297 aa23.19■■□□□ 1.3
CHD9-208ENST00000563410 MYBP10242 640 aa23.19■■□□□ 1.3
CHD9-208ENST00000563410 RPA1P27694 616 aa23.19■■□□□ 1.3
CHD9-208ENST00000563410 NUBP1P53384 320 aa23.19■■□□□ 1.3
CHD9-208ENST00000563410 TMEM105Q8N8V8 129 aa23.19■■□□□ 1.3
CHD9-208ENST00000563410 PAAF1Q9BRP4 392 aa23.19■■□□□ 1.3
CHD9-208ENST00000563410 RHOBTB2Q9BYZ6 727 aa23.19■■□□□ 1.3
CHD9-208ENST00000563410 FOXP1Q9H334 677 aaPredicted RBP23.19■■□□□ 1.3
CHD9-208ENST00000563410 FAM86C1Q9NVL1 165 aa23.19■■□□□ 1.3
CHD9-208ENST00000563410 ADAM28Q9UKQ2 775 aa23.19■■□□□ 1.3
CHD9-208ENST00000563410 ZFHX2Q9C0A1 2572 aaPredicted RBP23.19■■□□□ 1.3
CHD9-208ENST00000563410 EIF5BO60841 1220 aaKnown RBP23.18■■□□□ 1.3
CHD9-208ENST00000563410 RFPL2O75678 378 aa23.18■■□□□ 1.3
CHD9-208ENST00000563410 PAPLNO95428 1278 aa23.18■■□□□ 1.3
CHD9-208ENST00000563410 EDN1P05305 212 aa23.18■■□□□ 1.3
CHD9-208ENST00000563410 SPATA31D3P0C874 917 aa23.18■■□□□ 1.3
CHD9-208ENST00000563410 ORC2Q13416 577 aaPredicted RBP23.18■■□□□ 1.3
CHD9-208ENST00000563410 USP41Q3LFD5 358 aa23.18■■□□□ 1.3
CHD9-208ENST00000563410 PADI6Q6TGC4 694 aa23.18■■□□□ 1.3
CHD9-208ENST00000563410 SPATA31D4Q6ZUB0 917 aa23.18■■□□□ 1.3
CHD9-208ENST00000563410 ZBTB8OSQ8IWT0 167 aa23.18■■□□□ 1.3
CHD9-208ENST00000563410 GPR65Q8IYL9 337 aa23.18■■□□□ 1.3
CHD9-208ENST00000563410 LLPHQ9BRT6 129 aaKnown RBP23.18■■□□□ 1.3
CHD9-208ENST00000563410 PDZD7Q9H5P4 517 aa23.18■■□□□ 1.3
CHD9-208ENST00000563410 KCNK12Q9HB15 430 aa23.18■■□□□ 1.3
CHD9-208ENST00000563410 FNIP2Q9P278 1114 aa23.18■■□□□ 1.3
CHD9-208ENST00000563410 CYP11B2P19099 503 aa23.17■■□□□ 1.3
CHD9-208ENST00000563410 ECM1Q16610 540 aa23.17■■□□□ 1.3
CHD9-208ENST00000563410 CYP26C1Q6V0L0 522 aa23.17■■□□□ 1.3
CHD9-208ENST00000563410 PALB2Q86YC2 1186 aa23.17■■□□□ 1.3
CHD9-208ENST00000563410 FBXO18Q8NFZ0 1043 aa23.17■■□□□ 1.3
CHD9-208ENST00000563410 ERMNQ8TAM6 284 aa23.17■■□□□ 1.3
CHD9-208ENST00000563410 HDAC7Q8WUI4 952 aa23.17■■□□□ 1.3
CHD9-208ENST00000563410 ZNF707Q96C28 371 aaPredicted RBP23.17■■□□□ 1.3
CHD9-208ENST00000563410 CCDC113Q9H0I3 377 aa23.17■■□□□ 1.3
CHD9-208ENST00000563410 CXCL16Q9H2A7 254 aa23.17■■□□□ 1.3
CHD9-208ENST00000563410 WDR6Q9NNW5 1121 aaKnown RBP23.17■■□□□ 1.3
CHD9-208ENST00000563410 DPP7Q9UHL4 492 aa23.17■■□□□ 1.3
CHD9-208ENST00000563410 USP20Q9Y2K6 914 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms