RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 PPFIBP1Q86W92 1011 aa13.47□□□□□ -0.25
NSMCE1-204ENST00000563273 RNF168Q8IYW5 571 aaPredicted RBP13.47□□□□□ -0.25
NSMCE1-204ENST00000563273 SPIRE2Q8WWL2 714 aa13.47□□□□□ -0.25
NSMCE1-204ENST00000563273 SNX21Q969T3 373 aa13.47□□□□□ -0.25
NSMCE1-204ENST00000563273 CDK5RAP3Q96JB5 506 aa13.47□□□□□ -0.25
NSMCE1-204ENST00000563273 PNMA5Q96PV4 448 aa13.47□□□□□ -0.25
NSMCE1-204ENST00000563273 RUSC1Q9BVN2 902 aa13.47□□□□□ -0.25
NSMCE1-204ENST00000563273 VN1R3Q9BXE9 311 aa13.47□□□□□ -0.25
NSMCE1-204ENST00000563273 GBP3Q9H0R5 595 aa13.47□□□□□ -0.25
NSMCE1-204ENST00000563273 CD320Q9NPF0 282 aa13.47□□□□□ -0.25
NSMCE1-204ENST00000563273 BARX2Q9UMQ3 279 aaPredicted RBP13.47□□□□□ -0.25
NSMCE1-204ENST00000563273 TNFSF13BQ9Y275 285 aa13.47□□□□□ -0.25
NSMCE1-204ENST00000563273 SSX2IPQ9Y2D8 614 aa13.47□□□□□ -0.25
NSMCE1-204ENST00000563273 ATG2AQ2TAZ0 1938 aa13.47□□□□□ -0.25
NSMCE1-204ENST00000563273 PLXNA4Q9HCM2 1894 aa13.46□□□□□ -0.25
NSMCE1-204ENST00000563273 TTLL13PA6NNM8 815 aa13.46□□□□□ -0.25
NSMCE1-204ENST00000563273 K7ELQ4 463 aaPredicted RBP13.46□□□□□ -0.25
NSMCE1-204ENST00000563273 K7ERI5 159 aa13.46□□□□□ -0.25
NSMCE1-204ENST00000563273 LILRB3O75022 631 aa13.46□□□□□ -0.25
NSMCE1-204ENST00000563273 CLASP2O75122 1294 aaKnown RBP13.46□□□□□ -0.25
NSMCE1-204ENST00000563273 HIP1RO75146 1068 aa13.46□□□□□ -0.25
NSMCE1-204ENST00000563273 C1RP00736 705 aa13.46□□□□□ -0.25
NSMCE1-204ENST00000563273 SYT1P21579 422 aa13.46□□□□□ -0.25
NSMCE1-204ENST00000563273 SLC12A3P55017 1021 aa13.46□□□□□ -0.25
NSMCE1-204ENST00000563273 PTPN14Q15678 1187 aa13.46□□□□□ -0.25
NSMCE1-204ENST00000563273 CLUL1Q15846 466 aa13.46□□□□□ -0.25
NSMCE1-204ENST00000563273 TPRNQ4KMQ1 711 aa13.46□□□□□ -0.25
NSMCE1-204ENST00000563273 CABP7Q86V35 215 aa13.46□□□□□ -0.25
NSMCE1-204ENST00000563273 ZFP42Q96MM3 310 aa13.46□□□□□ -0.25
NSMCE1-204ENST00000563273 HERC2P3Q9BVR0 1158 aa13.46□□□□□ -0.25
NSMCE1-204ENST00000563273 S1PR5Q9H228 398 aa13.46□□□□□ -0.25
NSMCE1-204ENST00000563273 DZANK1Q9NVP4 752 aa13.46□□□□□ -0.25
NSMCE1-204ENST00000563273 MARCH5Q9NX47 278 aa13.46□□□□□ -0.25
NSMCE1-204ENST00000563273 MIOSQ9NXC5 875 aa13.46□□□□□ -0.25
NSMCE1-204ENST00000563273 USP15Q9Y4E8 981 aaPredicted RBP13.46□□□□□ -0.25
NSMCE1-204ENST00000563273 HCFC2Q9Y5Z7 792 aa13.46□□□□□ -0.25
NSMCE1-204ENST00000563273 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 VPS37CA5D8V6 355 aaPredicted RBP13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 BRD1O95696 1058 aa13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 SOD2P04179 222 aa13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 EDN1P05305 212 aa13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 PLA2G4BP0C869 781 aa13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 PDIA4P13667 645 aaKnown RBP13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 PLS3P13797 630 aa13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 AKAP5P24588 427 aa13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 SSTR3P32745 418 aaPredicted RBP13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 UBA7P41226 1012 aa13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 PEX3P56589 373 aa13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 ITIH3Q06033 890 aa13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 RESTQ13127 1097 aa13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 CBX2Q14781 532 aaPredicted RBP13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 SF3A1Q15459 793 aaKnown RBP13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 NT5DC1Q5TFE4 455 aa13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 ATF7IP2Q5U623 682 aa13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 SYCE2Q6PIF2 218 aa13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 CDR2LQ86X02 465 aaPredicted RBP13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 CALML4Q96GE6 196 aa13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 RPS6KC1Q96S38 1066 aa13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 KIFC3Q9BVG8 833 aa13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 COLEC11Q9BWP8 271 aa13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 PHF7Q9BWX1 381 aaPredicted RBP13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 EMILIN2Q9BXX0 1053 aa13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 MRPL4Q9BYD3 311 aaKnown RBP13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 PTPRHQ9HD43 1115 aa13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 KMT5AQ9NQR1 393 aa13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 PARP2Q9UGN5 583 aa13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 ODF2LQ9ULJ1 636 aa13.45□□□□□ -0.26
NSMCE1-204ENST00000563273 CCDC169A6NNP5 214 aa13.44□□□□□ -0.26
NSMCE1-204ENST00000563273 LOC730098B7Z3J9 87 aa13.44□□□□□ -0.26
NSMCE1-204ENST00000563273 H0YCG3 227 aa13.44□□□□□ -0.26
NSMCE1-204ENST00000563273 RECQL4O94761 1208 aa13.44□□□□□ -0.26
NSMCE1-204ENST00000563273 URODP06132 367 aa13.44□□□□□ -0.26
NSMCE1-204ENST00000563273 ALADP13716 330 aa13.44□□□□□ -0.26
NSMCE1-204ENST00000563273 OR1G1P47890 313 aa13.44□□□□□ -0.26
NSMCE1-204ENST00000563273 SMTNP53814 917 aa13.44□□□□□ -0.26
NSMCE1-204ENST00000563273 RBM10P98175 930 aaKnown RBP13.44□□□□□ -0.26
NSMCE1-204ENST00000563273 TUSC3Q13454 348 aa13.44□□□□□ -0.26
NSMCE1-204ENST00000563273 TMEM132AQ24JP5 1023 aa13.44□□□□□ -0.26
NSMCE1-204ENST00000563273 EEF1DP3Q658K8 133 aa13.44□□□□□ -0.26
NSMCE1-204ENST00000563273 TAS1R3Q7RTX0 852 aa13.44□□□□□ -0.26
NSMCE1-204ENST00000563273 TMEM87AQ8NBN3 555 aa13.44□□□□□ -0.26
NSMCE1-204ENST00000563273 SLC22A17Q8WUG5 538 aa13.44□□□□□ -0.26
NSMCE1-204ENST00000563273 ACO2Q99798 780 aaKnown RBP13.44□□□□□ -0.26
NSMCE1-204ENST00000563273 APOL6Q9BWW8 343 aa13.44□□□□□ -0.26
NSMCE1-204ENST00000563273 CCSER1Q9C0I3 900 aa13.44□□□□□ -0.26
NSMCE1-204ENST00000563273 ZSCAN16Q9H4T2 348 aaPredicted RBP13.44□□□□□ -0.26
NSMCE1-204ENST00000563273 MRPL17Q9NRX2 175 aaKnown RBP13.44□□□□□ -0.26
NSMCE1-204ENST00000563273 CHST7Q9NS84 486 aa13.44□□□□□ -0.26
NSMCE1-204ENST00000563273 SNTG2Q9NY99 539 aa13.44□□□□□ -0.26
NSMCE1-204ENST00000563273 PTGESO14684 152 aa13.43□□□□□ -0.26
NSMCE1-204ENST00000563273 GPR37L1O60883 481 aa13.43□□□□□ -0.26
NSMCE1-204ENST00000563273 THP07101 528 aa13.43□□□□□ -0.26
NSMCE1-204ENST00000563273 PROZP22891 400 aa13.43□□□□□ -0.26
NSMCE1-204ENST00000563273 ABCD1P33897 745 aa13.43□□□□□ -0.26
NSMCE1-204ENST00000563273 GRM5P41594 1212 aa13.43□□□□□ -0.26
NSMCE1-204ENST00000563273 DSG1Q02413 1049 aa13.43□□□□□ -0.26
NSMCE1-204ENST00000563273 PTPAQ15257 358 aa13.43□□□□□ -0.26
NSMCE1-204ENST00000563273 XKR4Q5GH76 650 aa13.43□□□□□ -0.26
NSMCE1-204ENST00000563273 TMEM161BQ8NDZ6 487 aa13.43□□□□□ -0.26
NSMCE1-204ENST00000563273 KHSRPQ92945 711 aaKnown RBP eCLIP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms