RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 GAS2L1Q99501 681 aaPredicted RBP9.39□□□□□ -0.91
UBR1-204ENST00000563239 PLVAPQ9BX97 442 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 MRPL4Q9BYD3 311 aaKnown RBP9.39□□□□□ -0.91
UBR1-204ENST00000563239 TRIM9Q9C026 710 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 CDT1Q9H211 546 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 TNMDQ9H2S6 317 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 IKZF4Q9H2S9 585 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 CUEDC2Q9H467 287 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 GOLPH3LQ9H4A5 285 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 ST6GALNAC4Q9H4F1 302 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 NRDE2Q9H7Z3 1164 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 ALG13Q9NP73 1137 aaKnown RBP9.39□□□□□ -0.91
UBR1-204ENST00000563239 KCNG1Q9UIX4 513 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 KCNH3Q9ULD8 1083 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 TBX20Q9UMR3 447 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 INPP5FQ9Y2H2 1132 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 RWDD3Q9Y3V2 267 aa9.39□□□□□ -0.91
UBR1-204ENST00000563239 MYH11P35749 1972 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 A0A1W2PQ27 194 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 A0A1W2PQ64 194 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 A0A1W2PQD8 194 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 TBCAO75347 108 aaKnown RBP9.38□□□□□ -0.91
UBR1-204ENST00000563239 PIGRP01833 764 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 LAG3P18627 525 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 COL9A1P20849 921 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 CASP1P29466 404 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 MLH1P40692 756 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 CASP5P51878 434 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 NDUFA8P51970 172 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 BCAR1P56945 870 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 NAB2Q15742 525 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 SLC39A4Q6P5W5 647 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 KCNT2Q6UVM3 1135 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 ZPBP2Q6X784 338 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 TMEM173Q86WV6 379 aaPredicted RBP9.38□□□□□ -0.91
UBR1-204ENST00000563239 FAM178BQ8IXR5 827 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 GRAMD1CQ8IYS0 662 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 CEP120Q8N960 986 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 BCL7CQ8WUZ0 217 aaPredicted RBP9.38□□□□□ -0.91
UBR1-204ENST00000563239 RSPH1Q8WYR4 309 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 C7orf25Q9BPX7 421 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 C11orf84Q9BUA3 381 aaPredicted RBP9.38□□□□□ -0.91
UBR1-204ENST00000563239 APOL6Q9BWW8 343 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 MRPL9Q9BYD2 267 aaKnown RBP9.38□□□□□ -0.91
UBR1-204ENST00000563239 TRIM6Q9C030 488 aaPredicted RBP9.38□□□□□ -0.91
UBR1-204ENST00000563239 ZHX3Q9H4I2 956 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 UBN1Q9NPG3 1134 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 SNTG2Q9NY99 539 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 FAM13BQ9NYF5 915 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 LMCD1Q9NZU5 365 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 KLK14Q9P0G3 267 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 DNAJB4Q9UDY4 337 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 SERTAD1Q9UHV2 236 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 CIZ1Q9ULV3 898 aaPredicted RBP9.38□□□□□ -0.91
UBR1-204ENST00000563239 GIT1Q9Y2X7 761 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 MYO9BQ13459 2157 aa9.38□□□□□ -0.91
UBR1-204ENST00000563239 SPTBN5Q9NRC6 3674 aaKnown RBP9.38□□□□□ -0.91
UBR1-204ENST00000563239 PRRC2BQ5JSZ5 2229 aaKnown RBP9.37□□□□□ -0.91
UBR1-204ENST00000563239 ZMYM2Q9UBW7 1377 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 ATG2AQ2TAZ0 1938 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 PLXNA4Q9HCM2 1894 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 NT5C1B-RDH14C9J2C7 533 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 ANKRD63C9JTQ0 380 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 H0YCG3 227 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 K7ENM7 598 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 PTGESO14684 152 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 FAM189A1O60320 539 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 TOM1L1O75674 476 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 FGF18O76093 207 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 RECQL4O94761 1208 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 EFEMP2O95967 443 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 POMCP01189 267 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 GALTP07902 379 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 SLFN14P0C7P3 912 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 MCF2P10911 925 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 GAP43P17677 238 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 HOXD13P35453 343 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 IRS1P35568 1242 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 PLA2G5P39877 138 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 GRM5P41594 1212 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 SLC11A1P49279 550 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 SCNN1GP51170 649 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 PLCB3Q01970 1234 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 MCL1Q07820 350 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 EHHADHQ08426 723 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 DSC1Q08554 894 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 KCNA1Q09470 495 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 STRN3Q13033 797 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 COASYQ13057 564 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 CUL4BQ13620 913 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 CCDC85BQ15834 202 aaPredicted RBP9.37□□□□□ -0.91
UBR1-204ENST00000563239 DCAF4L1Q3SXM0 396 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 XKR4Q5GH76 650 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 SPOUT1Q5T280 376 aaKnown RBP9.37□□□□□ -0.91
UBR1-204ENST00000563239 MPZL3Q6UWV2 235 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 ALKAL1Q6UXT8 129 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 ZBTB33Q86T24 672 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 MAP4K3Q8IVH8 894 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 COLGALT2Q8IYK4 626 aa9.37□□□□□ -0.91
UBR1-204ENST00000563239 SLC39A11Q8N1S5 342 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms