RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 HOOK2Q96ED9 719 aa4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 TEKT5Q96M29 485 aa4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 PLEKHG4BQ96PX9 1271 aa4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 UIMC1Q96RL1 719 aa4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 SLC6A15Q9H2J7 730 aa4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 ZNF703Q9H7S9 590 aaPredicted RBP4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 C14orf93Q9H972 538 aaKnown RBP4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 AGO3Q9H9G7 860 aaKnown RBP4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 TCEAL9Q9UHQ7 104 aa4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 FAM184BQ9ULE4 1060 aa4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 OVOL3O00110 214 aa4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 AKAP10O43572 662 aa4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 XPOTO43592 962 aaKnown RBP4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 ZNF202O95125 648 aa4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 SNUPNO95149 360 aaKnown RBP4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 C1SP09871 688 aa4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 LTA4HP09960 611 aaKnown RBP4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 VSIG10L2P0DP72 767 aa4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 C5AR1P21730 350 aa4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 CCND1P24385 295 aa4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 MCM7P33993 719 aa4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 WASP42768 502 aa4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 KIR2DL3P43628 341 aa4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 ADAM8P78325 824 aa4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 HHEXQ03014 270 aa4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 MALLQ13021 153 aa4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 NFE2Q16621 373 aaPredicted RBP4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 GAGE13Q4V321 117 aa4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 C19orf54Q5BKX5 351 aa4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 MUM1L1Q5H9M0 696 aa4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 EFCAB2Q5VUJ9 269 aa4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 KRTAP5-3Q6L8H2 238 aa4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 SGMS1Q86VZ5 419 aa4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 CMTR2Q8IYT2 770 aaKnown RBP4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 CPA6Q8N4T0 437 aa4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 AMER2Q8N7J2 671 aa4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 GLB1L3Q8NCI6 653 aaPredicted RBP4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 SHCBP1Q8NEM2 672 aa4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 CACTINQ8WUQ7 758 aaKnown RBP4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 RABGGTAQ92696 567 aa4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 GCDHQ92947 438 aaPredicted RBP4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 CDH19Q9H159 772 aa4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 GREM2Q9H772 168 aa4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 TLR9Q9NR96 1032 aa4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 AASDHPPTQ9NRN7 309 aa4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 AURKAIP1Q9NWT8 199 aaPredicted RBP4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 TUBD1Q9UJT1 453 aa4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 RBM8AQ9Y5S9 174 aaKnown RBP4.29□□□□□ -1.72
SHCBP1-202ENST00000563219 RPTORQ8N122 1335 aa4.28□□□□□ -1.72
SHCBP1-202ENST00000563219 NDUFS2O75306 463 aa4.28□□□□□ -1.72
SHCBP1-202ENST00000563219 ZRANB2O95218 330 aaKnown RBP eCLIP4.28□□□□□ -1.726e-6■■■■□ 21
SHCBP1-202ENST00000563219 JUNP05412 331 aaKnown RBP4.28□□□□□ -1.72
SHCBP1-202ENST00000563219 CTSSP25774 331 aa4.28□□□□□ -1.72
SHCBP1-202ENST00000563219 MCAMP43121 646 aa4.28□□□□□ -1.72
SHCBP1-202ENST00000563219 RAB27AP51159 221 aa4.28□□□□□ -1.72
SHCBP1-202ENST00000563219 ADKP55263 362 aaKnown RBP4.28□□□□□ -1.72
SHCBP1-202ENST00000563219 WNT3AP56704 352 aa4.28□□□□□ -1.72
SHCBP1-202ENST00000563219 PPP3CAQ08209 521 aa4.28□□□□□ -1.72
SHCBP1-202ENST00000563219 MGAT2Q10469 447 aa4.28□□□□□ -1.72
SHCBP1-202ENST00000563219 TCIRG1Q13488 830 aa4.28□□□□□ -1.72
SHCBP1-202ENST00000563219 ACAP2Q15057 778 aa4.28□□□□□ -1.72
SHCBP1-202ENST00000563219 SPTY2D1Q68D10 685 aaPredicted RBP4.28□□□□□ -1.72
SHCBP1-202ENST00000563219 THEMISQ8N1K5 641 aaPredicted RBP4.28□□□□□ -1.72
SHCBP1-202ENST00000563219 D2HGDHQ8N465 521 aa4.28□□□□□ -1.72
SHCBP1-202ENST00000563219 GPR156Q8NFN8 814 aa4.28□□□□□ -1.72
SHCBP1-202ENST00000563219 SNX33Q8WV41 574 aa4.28□□□□□ -1.72
SHCBP1-202ENST00000563219 SLC2A13Q96QE2 648 aa4.28□□□□□ -1.72
SHCBP1-202ENST00000563219 MPHOSPH9Q99550 1183 aa4.28□□□□□ -1.72
SHCBP1-202ENST00000563219 NUP88Q99567 741 aaPredicted RBP4.28□□□□□ -1.72
SHCBP1-202ENST00000563219 RTFDC1Q9BY42 306 aaPredicted RBP4.28□□□□□ -1.72
SHCBP1-202ENST00000563219 SLC52A1Q9NWF4 448 aa4.28□□□□□ -1.72
SHCBP1-202ENST00000563219 LUC7L2Q9Y383 392 aaKnown RBP4.28□□□□□ -1.72
SHCBP1-202ENST00000563219 PHF2O75151 1096 aa4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 RFPL1O75677 317 aa4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 ALDH1A2O94788 518 aa4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 TOX4O94842 621 aa4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 MAP4K4O95819 1239 aaPredicted RBP4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 VCAM1P19320 739 aa4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 BPIFB4P59827 614 aa4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 CCT2P78371 535 aaKnown RBP4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 ATP2C1P98194 919 aaPredicted RBP4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 PURAQ00577 322 aaKnown RBP4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 DPTQ07507 201 aa4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 UBE3CQ15386 1083 aa4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 MST1LQ2TV78 715 aa4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 CRB2Q5IJ48 1285 aa4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 FNDC7Q5VTL7 733 aa4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 FAM180AQ6UWF9 173 aa4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 ABHD15Q6UXT9 468 aa4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 MSL3Q8N5Y2 521 aaKnown RBP4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 ANKRD53Q8N9V6 530 aa4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 RIN2Q8WYP3 895 aaPredicted RBP4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 HOXB13Q92826 284 aaPredicted RBP4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 TMEM176AQ96HP8 235 aa4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 GPHA2Q96T91 129 aa4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 ADI1Q9BV57 179 aa4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 RHOBTB2Q9BYZ6 727 aa4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 RBM12Q9NTZ6 932 aaKnown RBP4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 HECAQ9UBI9 543 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms