RNA–Protein interactions for RNA: ENST00000563180.1

IRF8-203, Transcript of interferon regulatory factor 8, humanhuman

TSL 1 (best) BASIC

Gene IRF8, Length 1,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF8-203ENST00000563180 CDT1Q9H211 546 aa18.81■□□□□ 0.6
IRF8-203ENST00000563180 UBN1Q9NPG3 1134 aa18.81■□□□□ 0.6
IRF8-203ENST00000563180 HCSTQ9UBK5 93 aa18.81■□□□□ 0.6
IRF8-203ENST00000563180 PARP2Q9UGN5 583 aa18.81■□□□□ 0.6
IRF8-203ENST00000563180 CHD9Q3L8U1 2897 aa18.8■□□□□ 0.6
IRF8-203ENST00000563180 PVALEFA0A1B0GWK0 134 aa18.8■□□□□ 0.6
IRF8-203ENST00000563180 EPOPA6NHQ4 379 aa18.8■□□□□ 0.6
IRF8-203ENST00000563180 RFXAPO00287 272 aa18.8■□□□□ 0.6
IRF8-203ENST00000563180 GTPBP6O43824 516 aaPredicted RBP18.8■□□□□ 0.6
IRF8-203ENST00000563180 TOM1L1O75674 476 aa18.8■□□□□ 0.6
IRF8-203ENST00000563180 LINC00271P0C7V0 271 aa18.8■□□□□ 0.6
IRF8-203ENST00000563180 MYBP10242 640 aa18.8■□□□□ 0.6
IRF8-203ENST00000563180 PROZP22891 400 aa18.8■□□□□ 0.6
IRF8-203ENST00000563180 CTNNB1P35222 781 aa18.8■□□□□ 0.6
IRF8-203ENST00000563180 LIG4P49917 911 aa18.8■□□□□ 0.6
IRF8-203ENST00000563180 CASP5P51878 434 aa18.8■□□□□ 0.6
IRF8-203ENST00000563180 FAM160A1Q05DH4 1040 aa18.8■□□□□ 0.6
IRF8-203ENST00000563180 EPC2Q52LR7 807 aa18.8■□□□□ 0.6
IRF8-203ENST00000563180 FBXO22Q8NEZ5 403 aa18.8■□□□□ 0.6
IRF8-203ENST00000563180 ENGASEQ8NFI3 743 aa18.8■□□□□ 0.6
IRF8-203ENST00000563180 CLP1Q92989 425 aaKnown RBP18.8■□□□□ 0.6
IRF8-203ENST00000563180 HVCN1Q96D96 273 aa18.8■□□□□ 0.6
IRF8-203ENST00000563180 SAMD11Q96NU1 681 aa18.8■□□□□ 0.6
IRF8-203ENST00000563180 STRA6Q9BX79 667 aa18.8■□□□□ 0.6
IRF8-203ENST00000563180 CWH43Q9H720 699 aa18.8■□□□□ 0.6
IRF8-203ENST00000563180 SNTG2Q9NY99 539 aa18.8■□□□□ 0.6
IRF8-203ENST00000563180 ANKFY1Q9P2R3 1169 aa18.8■□□□□ 0.6
IRF8-203ENST00000563180 GIT1Q9Y2X7 761 aa18.8■□□□□ 0.6
IRF8-203ENST00000563180 PCDHB13Q9Y5F0 798 aa18.8■□□□□ 0.6
IRF8-203ENST00000563180 ABLIM1O14639 778 aa18.79■□□□□ 0.6
IRF8-203ENST00000563180 HNRNPDLO14979 420 aaKnown RBP18.79■□□□□ 0.6
IRF8-203ENST00000563180 PPP1R37O75864 691 aa18.79■□□□□ 0.6
IRF8-203ENST00000563180 PIGRP01833 764 aa18.79■□□□□ 0.6
IRF8-203ENST00000563180 PRR29P0C7W0 189 aa18.79■□□□□ 0.6
IRF8-203ENST00000563180 MCF2P10911 925 aa18.79■□□□□ 0.6
IRF8-203ENST00000563180 HARSP12081 509 aaKnown RBP18.79■□□□□ 0.6
IRF8-203ENST00000563180 BMPR1AP36894 532 aa18.79■□□□□ 0.6
IRF8-203ENST00000563180 MATR3P43243 847 aaKnown RBP eCLIP18.79■□□□□ 0.6
IRF8-203ENST00000563180 AFF1P51825 1210 aaKnown RBP18.79■□□□□ 0.6
IRF8-203ENST00000563180 SNW1Q13573 536 aaKnown RBP18.79■□□□□ 0.6
IRF8-203ENST00000563180 MAP4K3Q8IVH8 894 aa18.79■□□□□ 0.6
IRF8-203ENST00000563180 LRRC43Q8N309 656 aa18.79■□□□□ 0.6
IRF8-203ENST00000563180 URGCPQ8TCY9 931 aa18.79■□□□□ 0.6
IRF8-203ENST00000563180 GUCD1Q96NT3 240 aa18.79■□□□□ 0.6
IRF8-203ENST00000563180 ACCSQ96QU6 501 aa18.79■□□□□ 0.6
IRF8-203ENST00000563180 GAD1Q99259 594 aa18.79■□□□□ 0.6
IRF8-203ENST00000563180 CDX2Q99626 313 aaPredicted RBP18.79■□□□□ 0.6
IRF8-203ENST00000563180 MRPL9Q9BYD2 267 aaKnown RBP18.79■□□□□ 0.6
IRF8-203ENST00000563180 KLK14Q9P0G3 267 aa18.79■□□□□ 0.6
IRF8-203ENST00000563180 GDAQ9Y2T3 454 aa18.79■□□□□ 0.6
IRF8-203ENST00000563180 RWDD3Q9Y3V2 267 aa18.79■□□□□ 0.6
IRF8-203ENST00000563180 MYO9BQ13459 2157 aa18.78■□□□□ 0.6
IRF8-203ENST00000563180 ARL5CA6NH57 179 aa18.78■□□□□ 0.6
IRF8-203ENST00000563180 CLDN3O15551 220 aa18.78■□□□□ 0.6
IRF8-203ENST00000563180 KLRC4O43908 158 aa18.78■□□□□ 0.6
IRF8-203ENST00000563180 PRPF40AO75400 957 aaKnown RBP18.78■□□□□ 0.6
IRF8-203ENST00000563180 PRPF6O94906 941 aaKnown RBP18.78■□□□□ 0.6
IRF8-203ENST00000563180 MYL1P05976 194 aa18.78■□□□□ 0.6
IRF8-203ENST00000563180 MLH1P40692 756 aa18.78■□□□□ 0.6
IRF8-203ENST00000563180 RNASELQ05823 741 aaKnown RBP18.78■□□□□ 0.6
IRF8-203ENST00000563180 KCNA1Q09470 495 aa18.78■□□□□ 0.6
IRF8-203ENST00000563180 ALCAMQ13740 583 aa18.78■□□□□ 0.6
IRF8-203ENST00000563180 FAM26FQ5R3K3 315 aa18.78■□□□□ 0.6
IRF8-203ENST00000563180 L1TD1Q5T7N2 865 aaKnown RBP18.78■□□□□ 0.6
IRF8-203ENST00000563180 KANK3Q6NY19 840 aa18.78■□□□□ 0.6
IRF8-203ENST00000563180 GLIS3Q8NEA6 775 aa18.78■□□□□ 0.6
IRF8-203ENST00000563180 MYLIPQ8WY64 445 aa18.78■□□□□ 0.6
IRF8-203ENST00000563180 RSPH1Q8WYR4 309 aa18.78■□□□□ 0.6
IRF8-203ENST00000563180 IKZF4Q9H2S9 585 aa18.78■□□□□ 0.6
IRF8-203ENST00000563180 TBC1D13Q9NVG8 400 aa18.78■□□□□ 0.6
IRF8-203ENST00000563180 TDRD15B5MCY1 1934 aaKnown RBP18.77■□□□□ 0.6
IRF8-203ENST00000563180 ANKRD63C9JTQ0 380 aa18.77■□□□□ 0.6
IRF8-203ENST00000563180 RECQL4O94761 1208 aa18.77■□□□□ 0.6
IRF8-203ENST00000563180 POMCP01189 267 aa18.77■□□□□ 0.6
IRF8-203ENST00000563180 GRM5P41594 1212 aa18.77■□□□□ 0.6
IRF8-203ENST00000563180 OSTNP61366 133 aa18.77■□□□□ 0.6
IRF8-203ENST00000563180 EHHADHQ08426 723 aa18.77■□□□□ 0.6
IRF8-203ENST00000563180 NOLC1Q14978 699 aaKnown RBP eCLIP18.77■□□□□ 0.6
IRF8-203ENST00000563180 SLC39A4Q6P5W5 647 aa18.77■□□□□ 0.6
IRF8-203ENST00000563180 STXBP4Q6ZWJ1 553 aa18.77■□□□□ 0.6
IRF8-203ENST00000563180 THNSL1Q8IYQ7 743 aa18.77■□□□□ 0.6
IRF8-203ENST00000563180 CEP120Q8N960 986 aa18.77■□□□□ 0.6
IRF8-203ENST00000563180 GDPD5Q8WTR4 605 aa18.77■□□□□ 0.6
IRF8-203ENST00000563180 CCDC34Q96HJ3 373 aa18.77■□□□□ 0.6
IRF8-203ENST00000563180 ZFP42Q96MM3 310 aa18.77■□□□□ 0.6
IRF8-203ENST00000563180 CCDC94Q9BW85 323 aaPredicted RBP18.77■□□□□ 0.6
IRF8-203ENST00000563180 HAPLN2Q9GZV7 340 aa18.77■□□□□ 0.6
IRF8-203ENST00000563180 GBP3Q9H0R5 595 aa18.77■□□□□ 0.6
IRF8-203ENST00000563180 AAASQ9NRG9 546 aa18.77■□□□□ 0.6
IRF8-203ENST00000563180 MIOSQ9NXC5 875 aa18.77■□□□□ 0.6
IRF8-203ENST00000563180 KANSL3Q9P2N6 904 aa18.77■□□□□ 0.6
IRF8-203ENST00000563180 EXOC7Q9UPT5 735 aa18.77■□□□□ 0.6
IRF8-203ENST00000563180 COL4A4P53420 1690 aaPredicted RBP18.76■□□□□ 0.59
IRF8-203ENST00000563180 TISP43B9A030 160 aa18.76■□□□□ 0.59
IRF8-203ENST00000563180 INPPL1O15357 1258 aa18.76■□□□□ 0.59
IRF8-203ENST00000563180 NR1I2O75469 434 aa18.76■□□□□ 0.59
IRF8-203ENST00000563180 RPN1P04843 607 aaKnown RBP18.76■□□□□ 0.59
IRF8-203ENST00000563180 RB1P06400 928 aa18.76■□□□□ 0.59
IRF8-203ENST00000563180 LAG3P18627 525 aa18.76■□□□□ 0.59
IRF8-203ENST00000563180 SCNN1GP51170 649 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms