RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 CHRDQ9H2X0 955 aa7.08□□□□□ -1.28
TCF4-213ENST00000562543 AATFQ9NY61 560 aaKnown RBP eCLIP7.08□□□□□ -1.28
TCF4-213ENST00000562543 ANKMY1Q9P2S6 941 aa7.08□□□□□ -1.28
TCF4-213ENST00000562543 HDAC6Q9UBN7 1215 aa7.08□□□□□ -1.28
TCF4-213ENST00000562543 SOX13Q9UN79 622 aa7.08□□□□□ -1.28
TCF4-213ENST00000562543 NF1P21359 2839 aa7.08□□□□□ -1.28
TCF4-213ENST00000562543 CACNA1EQ15878 2313 aa7.07□□□□□ -1.28
TCF4-213ENST00000562543 PLXNB3Q9ULL4 1909 aa7.07□□□□□ -1.28
TCF4-213ENST00000562543 IL16Q14005 1332 aa7.07□□□□□ -1.28
TCF4-213ENST00000562543 SPENQ96T58 3664 aaKnown RBP7.07□□□□□ -1.28
TCF4-213ENST00000562543 RPS9P46781 194 aaKnown RBP7.07□□□□□ -1.28
TCF4-213ENST00000562543 CSRP3P50461 194 aa7.07□□□□□ -1.28
TCF4-213ENST00000562543 UBXN2BQ14CS0 331 aa7.07□□□□□ -1.28
TCF4-213ENST00000562543 PTPN14Q15678 1187 aa7.07□□□□□ -1.28
TCF4-213ENST00000562543 ATP2B3Q16720 1220 aa7.07□□□□□ -1.28
TCF4-213ENST00000562543 RABL6Q3YEC7 729 aaPredicted RBP7.07□□□□□ -1.28
TCF4-213ENST00000562543 BEND3Q5T5X7 828 aa7.07□□□□□ -1.28
TCF4-213ENST00000562543 USP26Q9BXU7 913 aa7.07□□□□□ -1.28
TCF4-213ENST00000562543 ARRDC1-AS1Q9H2J1 176 aa7.07□□□□□ -1.28
TCF4-213ENST00000562543 SH2D4AQ9H788 454 aa7.07□□□□□ -1.28
TCF4-213ENST00000562543 LTB4R2Q9NPC1 389 aa7.07□□□□□ -1.28
TCF4-213ENST00000562543 JADE2Q9NQC1 790 aa7.07□□□□□ -1.28
TCF4-213ENST00000562543 PCNX2A6NKB5 2137 aa7.07□□□□□ -1.28
TCF4-213ENST00000562543 ITPR2Q14571 2701 aa7.07□□□□□ -1.28
TCF4-213ENST00000562543 A0A087WV48 116 aa7.06□□□□□ -1.28
TCF4-213ENST00000562543 FAM170BA6NMN3 283 aa7.06□□□□□ -1.28
TCF4-213ENST00000562543 C4orf47A7E2U8 309 aa7.06□□□□□ -1.28
TCF4-213ENST00000562543 CAPN9O14815 690 aa7.06□□□□□ -1.28
TCF4-213ENST00000562543 NKRFO15226 690 aaKnown RBP eCLIP7.06□□□□□ -1.28
TCF4-213ENST00000562543 FGF18O76093 207 aa7.06□□□□□ -1.28
TCF4-213ENST00000562543 EPN2O95208 641 aa7.06□□□□□ -1.28
TCF4-213ENST00000562543 THPOP40225 353 aa7.06□□□□□ -1.28
TCF4-213ENST00000562543 FGD1P98174 961 aa7.06□□□□□ -1.28
TCF4-213ENST00000562543 APOBRQ0VD83 1088 aa7.06□□□□□ -1.28
TCF4-213ENST00000562543 MTAPQ13126 283 aa7.06□□□□□ -1.28
TCF4-213ENST00000562543 SRSF5Q13243 272 aaKnown RBP7.06□□□□□ -1.28
TCF4-213ENST00000562543 FZD5Q13467 585 aa7.06□□□□□ -1.28
TCF4-213ENST00000562543 NFKBIBQ15653 356 aa7.06□□□□□ -1.28
TCF4-213ENST00000562543 DAB2IPQ5VWQ8 1189 aa7.06□□□□□ -1.28
TCF4-213ENST00000562543 PCSK4Q6UW60 755 aa7.06□□□□□ -1.28
TCF4-213ENST00000562543 NFXL1Q6ZNB6 911 aa7.06□□□□□ -1.28
TCF4-213ENST00000562543 VN1R5Q7Z5H4 357 aa7.06□□□□□ -1.28
TCF4-213ENST00000562543 MDM1Q8TC05 714 aa7.06□□□□□ -1.28
TCF4-213ENST00000562543 FBLIM1Q8WUP2 373 aa7.06□□□□□ -1.28
TCF4-213ENST00000562543 NXPE3Q969Y0 559 aa7.06□□□□□ -1.28
TCF4-213ENST00000562543 OSMRQ99650 979 aa7.06□□□□□ -1.28
TCF4-213ENST00000562543 EDEM2Q9BV94 578 aa7.06□□□□□ -1.28
TCF4-213ENST00000562543 STK31Q9BXU1 1019 aa7.06□□□□□ -1.28
TCF4-213ENST00000562543 A1CFQ9NQ94 594 aaKnown RBP7.06□□□□□ -1.28
TCF4-213ENST00000562543 MGAQ8IWI9 3026 aa7.06□□□□□ -1.28
TCF4-213ENST00000562543 FNDC1Q4ZHG4 1894 aaPredicted RBP7.06□□□□□ -1.28
TCF4-213ENST00000562543 USP9YO00507 2555 aaPredicted RBP7.06□□□□□ -1.28
TCF4-213ENST00000562543 ASCC3Q8N3C0 2202 aaKnown RBP7.05□□□□□ -1.28
TCF4-213ENST00000562543 PCNX1Q96RV3 2341 aa7.05□□□□□ -1.28
TCF4-213ENST00000562543 MEGF11A6BM72 1044 aa7.05□□□□□ -1.28
TCF4-213ENST00000562543 ATG7O95352 703 aa7.05□□□□□ -1.28
TCF4-213ENST00000562543 BAG3O95817 575 aa7.05□□□□□ -1.28
TCF4-213ENST00000562543 CNR2P34972 360 aa7.05□□□□□ -1.28
TCF4-213ENST00000562543 ADMP35318 185 aa7.05□□□□□ -1.28
TCF4-213ENST00000562543 PRKCQQ04759 706 aa7.05□□□□□ -1.28
TCF4-213ENST00000562543 GABPAQ06546 454 aa7.05□□□□□ -1.28
TCF4-213ENST00000562543 FAM83BQ5T0W9 1011 aa7.05□□□□□ -1.28
TCF4-213ENST00000562543 CDPF1Q6NVV7 123 aa7.05□□□□□ -1.28
TCF4-213ENST00000562543 SERINC5Q86VE9 423 aa7.05□□□□□ -1.28
TCF4-213ENST00000562543 CPXCR1Q8N123 301 aa7.05□□□□□ -1.28
TCF4-213ENST00000562543 C7orf31Q8N865 590 aa7.05□□□□□ -1.28
TCF4-213ENST00000562543 ANKRD44Q8N8A2 993 aa7.05□□□□□ -1.28
TCF4-213ENST00000562543 COPS5Q92905 334 aa7.05□□□□□ -1.28
TCF4-213ENST00000562543 TCF25Q9BQ70 676 aa7.05□□□□□ -1.28
TCF4-213ENST00000562543 SLF1Q9BQI6 1058 aa7.05□□□□□ -1.28
TCF4-213ENST00000562543 ZKSCAN3Q9BRR0 538 aa7.05□□□□□ -1.28
TCF4-213ENST00000562543 NOL10Q9BSC4 688 aaKnown RBP7.05□□□□□ -1.28
TCF4-213ENST00000562543 TMPRSS13Q9BYE2 586 aa7.05□□□□□ -1.28
TCF4-213ENST00000562543 SMOC1Q9H4F8 434 aa7.05□□□□□ -1.28
TCF4-213ENST00000562543 NGRNQ9NPE2 291 aaKnown RBP7.05□□□□□ -1.28
TCF4-213ENST00000562543 ENTPD7Q9NQZ7 604 aa7.05□□□□□ -1.28
TCF4-213ENST00000562543 EPS15L1Q9UBC2 864 aa7.05□□□□□ -1.28
TCF4-213ENST00000562543 CCDC39Q9UFE4 941 aa7.05□□□□□ -1.28
TCF4-213ENST00000562543 LZTS1Q9Y250 596 aa7.05□□□□□ -1.28
TCF4-213ENST00000562543 HIF3AQ9Y2N7 669 aa7.05□□□□□ -1.28
TCF4-213ENST00000562543 LAMA4Q16363 1823 aa7.05□□□□□ -1.28
TCF4-213ENST00000562543 LOC100289279A0A1B0GTE1 492 aa7.04□□□□□ -1.28
TCF4-213ENST00000562543 H0Y626 953 aa7.04□□□□□ -1.28
TCF4-213ENST00000562543 EYA2O00167 538 aa7.04□□□□□ -1.28
TCF4-213ENST00000562543 MPHOSPH10O00566 681 aaKnown RBP7.04□□□□□ -1.28
TCF4-213ENST00000562543 EREGO14944 169 aa7.04□□□□□ -1.28
TCF4-213ENST00000562543 CLASP2O75122 1294 aaKnown RBP7.04□□□□□ -1.28
TCF4-213ENST00000562543 TRIM16O95361 564 aa7.04□□□□□ -1.28
TCF4-213ENST00000562543 PDGFAP04085 211 aa7.04□□□□□ -1.28
TCF4-213ENST00000562543 ADORA1P30542 326 aa7.04□□□□□ -1.28
TCF4-213ENST00000562543 ARL4DP49703 201 aa7.04□□□□□ -1.28
TCF4-213ENST00000562543 ICA1Q05084 483 aa7.04□□□□□ -1.28
TCF4-213ENST00000562543 SNW1Q13573 536 aaKnown RBP7.04□□□□□ -1.28
TCF4-213ENST00000562543 PPP2R5BQ15173 497 aa7.04□□□□□ -1.28
TCF4-213ENST00000562543 MLF2Q15773 248 aaPredicted RBP7.04□□□□□ -1.28
TCF4-213ENST00000562543 MSMPQ1L6U9 139 aa7.04□□□□□ -1.28
TCF4-213ENST00000562543 PAN2Q504Q3 1202 aaKnown RBP7.04□□□□□ -1.28
TCF4-213ENST00000562543 TCEAL6Q6IPX3 200 aa7.04□□□□□ -1.28
TCF4-213ENST00000562543 XKR5Q6UX68 686 aa7.04□□□□□ -1.28
TCF4-213ENST00000562543 RSPO2Q6UXX9 243 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms