RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 SELENOOQ9BVL4 669 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 THAP2Q9H0W7 228 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 KIAA1586Q9HCI6 787 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 ZNFX1Q9P2E3 1918 aaKnown RBP10.59□□□□□ -0.71
SMG1-205ENST00000561947 ZNF233A6NK53 670 aa10.59□□□□□ -0.71
SMG1-205ENST00000561947 EXTL3O43909 919 aa10.59□□□□□ -0.71
SMG1-205ENST00000561947 BUB1BO60566 1050 aaPredicted RBP10.59□□□□□ -0.71
SMG1-205ENST00000561947 PIGRP01833 764 aa10.59□□□□□ -0.71
SMG1-205ENST00000561947 DLATP10515 647 aaKnown RBP10.59□□□□□ -0.71
SMG1-205ENST00000561947 TGFB3P10600 412 aa10.59□□□□□ -0.71
SMG1-205ENST00000561947 RFC5P40937 340 aa10.59□□□□□ -0.71
SMG1-205ENST00000561947 MRPS25P82663 173 aaKnown RBP10.59□□□□□ -0.71
SMG1-205ENST00000561947 PTPROQ16827 1216 aa10.59□□□□□ -0.71
SMG1-205ENST00000561947 C9orf131Q5VYM1 1079 aa10.59□□□□□ -0.71
SMG1-205ENST00000561947 FAM160B1Q5W0V3 765 aa10.59□□□□□ -0.71
SMG1-205ENST00000561947 SV2AQ7L0J3 742 aa10.59□□□□□ -0.71
SMG1-205ENST00000561947 METTL13Q8N6R0 699 aa10.59□□□□□ -0.71
SMG1-205ENST00000561947 DEPTORQ8TB45 409 aa10.59□□□□□ -0.71
SMG1-205ENST00000561947 EPS8L1Q8TE68 723 aa10.59□□□□□ -0.71
SMG1-205ENST00000561947 AFAP1L1Q8TED9 768 aa10.59□□□□□ -0.71
SMG1-205ENST00000561947 SLC7A3Q8WY07 619 aa10.59□□□□□ -0.71
SMG1-205ENST00000561947 HES6Q96HZ4 224 aa10.59□□□□□ -0.71
SMG1-205ENST00000561947 ISCUQ9H1K1 167 aa10.59□□□□□ -0.71
SMG1-205ENST00000561947 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.59□□□□□ -0.71
SMG1-205ENST00000561947 RAB20Q9NX57 234 aa10.59□□□□□ -0.71
SMG1-205ENST00000561947 TMEM59LQ9UK28 342 aa10.59□□□□□ -0.71
SMG1-205ENST00000561947 NOCTQ9UK39 431 aaKnown RBP10.59□□□□□ -0.71
SMG1-205ENST00000561947 AMFRQ9UKV5 643 aa10.59□□□□□ -0.71
SMG1-205ENST00000561947 STYXL1Q9Y6J8 313 aa10.59□□□□□ -0.71
SMG1-205ENST00000561947 KIAA0391O15091 583 aaKnown RBP10.59□□□□□ -0.71
SMG1-205ENST00000561947 CEP104O60308 925 aa10.59□□□□□ -0.71
SMG1-205ENST00000561947 SGPL1O95470 568 aa10.59□□□□□ -0.71
SMG1-205ENST00000561947 COPB2P35606 906 aa10.59□□□□□ -0.71
SMG1-205ENST00000561947 TTLL12Q14166 644 aaPredicted RBP10.59□□□□□ -0.71
SMG1-205ENST00000561947 TARBP2Q15633 366 aaKnown RBP10.59□□□□□ -0.71
SMG1-205ENST00000561947 NOP9Q86U38 636 aaKnown RBP10.59□□□□□ -0.71
SMG1-205ENST00000561947 UBE2Q2Q8WVN8 375 aa10.59□□□□□ -0.71
SMG1-205ENST00000561947 MPHOSPH6Q99547 160 aaKnown RBP10.59□□□□□ -0.71
SMG1-205ENST00000561947 R3HDMLQ9H3Y0 253 aa10.59□□□□□ -0.71
SMG1-205ENST00000561947 NRBP2Q9NSY0 501 aa10.59□□□□□ -0.71
SMG1-205ENST00000561947 HPCAL4Q9UM19 191 aa10.59□□□□□ -0.71
SMG1-205ENST00000561947 A0A0U1RQG5 324 aaPredicted RBP10.58□□□□□ -0.72
SMG1-205ENST00000561947 LRRIQ4A6NIV6 560 aa10.58□□□□□ -0.72
SMG1-205ENST00000561947 CYP26A1O43174 497 aa10.58□□□□□ -0.72
SMG1-205ENST00000561947 GGPS1O95749 300 aa10.58□□□□□ -0.72
SMG1-205ENST00000561947 CHRNB2P17787 502 aa10.58□□□□□ -0.72
SMG1-205ENST00000561947 STAT5BP51692 787 aa10.58□□□□□ -0.72
SMG1-205ENST00000561947 HADHBP55084 474 aaKnown RBP10.58□□□□□ -0.72
SMG1-205ENST00000561947 RNASE9P60153 205 aaKnown RBP10.58□□□□□ -0.72
SMG1-205ENST00000561947 TNNC1P63316 161 aa10.58□□□□□ -0.72
SMG1-205ENST00000561947 PRPF4BQ13523 1007 aaKnown RBP10.58□□□□□ -0.72
SMG1-205ENST00000561947 MOGSQ13724 837 aa10.58□□□□□ -0.72
SMG1-205ENST00000561947 PSMD6Q15008 389 aa10.58□□□□□ -0.72
SMG1-205ENST00000561947 TCEAL1Q15170 157 aa10.58□□□□□ -0.72
SMG1-205ENST00000561947 METTL7BQ6UX53 244 aa10.58□□□□□ -0.72
SMG1-205ENST00000561947 C15orf39Q6ZRI6 1047 aa10.58□□□□□ -0.72
SMG1-205ENST00000561947 USP50Q70EL3 339 aaPredicted RBP10.58□□□□□ -0.72
SMG1-205ENST00000561947 RHOT2Q8IXI1 618 aa10.58□□□□□ -0.72
SMG1-205ENST00000561947 PSPC1Q8WXF1 523 aaKnown RBP10.58□□□□□ -0.72
SMG1-205ENST00000561947 CALR3Q96L12 384 aaKnown RBP10.58□□□□□ -0.72
SMG1-205ENST00000561947 FGD4Q96M96 766 aa10.58□□□□□ -0.72
SMG1-205ENST00000561947 PCDHB18PQ96TA0 734 aa10.58□□□□□ -0.72
SMG1-205ENST00000561947 KRT12Q99456 494 aa10.58□□□□□ -0.72
SMG1-205ENST00000561947 HINFPQ9BQA5 517 aa10.58□□□□□ -0.72
SMG1-205ENST00000561947 TXNRD2Q9NNW7 524 aa10.58□□□□□ -0.72
SMG1-205ENST00000561947 ZCCHC17Q9NP64 241 aaKnown RBP10.58□□□□□ -0.72
SMG1-205ENST00000561947 PGRMC1O00264 195 aaKnown RBP10.58□□□□□ -0.72
SMG1-205ENST00000561947 ZC3H11AO75152 810 aaKnown RBP eCLIP10.58□□□□□ -0.72
SMG1-205ENST00000561947 RTN2O75298 545 aa10.58□□□□□ -0.72
SMG1-205ENST00000561947 FTLP02792 175 aaPredicted RBP10.58□□□□□ -0.72
SMG1-205ENST00000561947 YBX3P16989 372 aaKnown RBP eCLIP10.58□□□□□ -0.729e-6■■■□□ 18.1
SMG1-205ENST00000561947 TCF7P36402 384 aaPredicted RBP10.58□□□□□ -0.72
SMG1-205ENST00000561947 CLDN10P78369 228 aa10.58□□□□□ -0.72
SMG1-205ENST00000561947 EEPD1Q7L9B9 569 aa10.58□□□□□ -0.72
SMG1-205ENST00000561947 SLC47A2Q86VL8 602 aa10.58□□□□□ -0.72
SMG1-205ENST00000561947 RASGEF1CQ8N431 466 aa10.58□□□□□ -0.72
SMG1-205ENST00000561947 SCFD2Q8WU76 684 aa10.58□□□□□ -0.72
SMG1-205ENST00000561947 SEPT1Q8WYJ6 367 aa10.58□□□□□ -0.72
SMG1-205ENST00000561947 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.58□□□□□ -0.72
SMG1-205ENST00000561947 GDF3Q9NR23 364 aa10.58□□□□□ -0.72
SMG1-205ENST00000561947 RBPJLQ9UBG7 517 aa10.58□□□□□ -0.72
SMG1-205ENST00000561947 AGO2Q9UKV8 859 aaKnown RBP10.58□□□□□ -0.72
SMG1-205ENST00000561947 COG5Q9UP83 839 aa10.58□□□□□ -0.72
SMG1-205ENST00000561947 NOC2LQ9Y3T9 749 aaKnown RBP10.58□□□□□ -0.72
SMG1-205ENST00000561947 MCM3APO60318 1980 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 K7ERI5 159 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 SOCS7O14512 581 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 PGK2P07205 417 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 GZMAP12544 262 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 OSBPP22059 807 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 AARSP49588 968 aaKnown RBP eCLIP10.57□□□□□ -0.72
SMG1-205ENST00000561947 EPHB4P54760 987 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 NLRP11P59045 1033 aaKnown RBP10.57□□□□□ -0.72
SMG1-205ENST00000561947 FMO1Q01740 532 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 LY6KQ17RY6 165 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 TAF3Q5VWG9 929 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 SLFN12LQ6IEE8 588 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 ENOSF1Q7L5Y1 443 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 IFT20Q8IY31 132 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 ZC3H15Q8WU90 426 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms