RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 ELAC1Q9H777 363 aaKnown RBP2.29□□□□□ -2.04
RTF1-207ENST00000561076 ZMAT4Q9H898 229 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 MANSC1Q9H8J5 431 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 CNTD2Q9H8S5 307 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 ZMAT3Q9HA38 289 aaKnown RBP2.29□□□□□ -2.04
RTF1-207ENST00000561076 NOD2Q9HC29 1040 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 CD248Q9HCU0 757 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 KCND1Q9NSA2 647 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 TDP1Q9NUW8 608 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 NDFIP2Q9NV92 336 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 PNPOQ9NVS9 261 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.29□□□□□ -2.04
RTF1-207ENST00000561076 ADD3Q9UEY8 706 aaKnown RBP2.29□□□□□ -2.04
RTF1-207ENST00000561076 ABCF2Q9UG63 623 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 AFF4Q9UHB7 1163 aaKnown RBP2.29□□□□□ -2.04
RTF1-207ENST00000561076 NAGPAQ9UK23 515 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 DENND2AQ9ULE3 1009 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 SYNPO2Q9UMS6 1093 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 USP18Q9UMW8 372 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 MAN2B2Q9Y2E5 1009 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 DAGLAQ9Y4D2 1042 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 PAXBP1Q9Y5B6 917 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 PCDHA3Q9Y5H8 950 aa2.29□□□□□ -2.04
RTF1-207ENST00000561076 SOS1Q07889 1333 aaPredicted RBP2.28□□□□□ -2.04
RTF1-207ENST00000561076 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.28□□□□□ -2.04
RTF1-207ENST00000561076 FAM187AA6NFU0 413 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 WTIPA6NIX2 430 aaPredicted RBP2.28□□□□□ -2.04
RTF1-207ENST00000561076 TTC36A6NLP5 189 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 NEURL1BA8MQ27 555 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 GNAT3A8MTJ3 354 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 ADARB2-AS1A8MUL3 147 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 GOLGA6L22H0YM25 854 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 H7C0S8 307 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 MYO1CO00159 1063 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 FCHO1O14526 889 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 TSPAN4O14817 238 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 PIP5K1BO14986 540 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 NPC1O15118 1278 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 FKTNO75072 461 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 CLASP2O75122 1294 aaKnown RBP2.28□□□□□ -2.04
RTF1-207ENST00000561076 LRRN2O75325 713 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 TADA3O75528 432 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 RASSF9O75901 435 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 PRPF6O94906 941 aaKnown RBP2.28□□□□□ -2.04
RTF1-207ENST00000561076 PCDH8O95206 1070 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 HSPA4LO95757 839 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 ANXA2P07355 339 aaKnown RBP2.28□□□□□ -2.04
RTF1-207ENST00000561076 SYPP08247 313 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 THEGLP0DJG4 465 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 ZBTB48P10074 688 aaPredicted RBP2.28□□□□□ -2.04
RTF1-207ENST00000561076 ACADMP11310 421 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 BMP1P13497 986 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 GYS1P13807 737 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 VAV1P15498 845 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 MUTP22033 750 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 RXRBP28702 533 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 LTKP29376 864 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 ATP5DP30049 168 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 BMP8BP34820 402 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 KIR3DL1P43629 444 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 MMP14P50281 582 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 KRT83P78385 493 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 MRPS35P82673 323 aaKnown RBP2.28□□□□□ -2.04
RTF1-207ENST00000561076 MXRA7P84157 204 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 ROM1Q03395 351 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 SOX4Q06945 474 aaPredicted RBP2.28□□□□□ -2.04
RTF1-207ENST00000561076 MAP3K12Q12852 859 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 NOGQ13253 232 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 MPP3Q13368 585 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 RAB32Q13637 225 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 IL10RAQ13651 578 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 RASA2Q15283 850 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 ANKRD1Q15327 319 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 RPS6KA2Q15349 733 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 TESK1Q15569 626 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 GPR68Q15743 365 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 ASIC2Q16515 512 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 ATP2B3Q16720 1220 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 NBPF8Q3BBV2 869 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 C3orf36Q3SXR2 165 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 VWA3BQ502W6 1294 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 METTL24Q5JXM2 366 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 ZMYM1Q5SVZ6 1142 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 GPATCH4Q5T3I0 446 aaKnown RBP2.28□□□□□ -2.04
RTF1-207ENST00000561076 SFRP5Q5T4F7 317 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 HLA-DQA1Q5Y7H0 255 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 ARL6IP4Q66PJ3 421 aaKnown RBP2.28□□□□□ -2.04
RTF1-207ENST00000561076 CREB3L3Q68CJ9 461 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 TRIM68Q6AZZ1 485 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 ACAD10Q6JQN1 1059 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 ESRP1Q6NXG1 681 aaKnown RBP2.28□□□□□ -2.04
RTF1-207ENST00000561076 CNKSR3Q6P9H4 555 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 CYP2R1Q6VVX0 501 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 ACAD11Q709F0 780 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 ZNF765Q7L2R6 523 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 MOGAT3Q86VF5 341 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 CHD1LQ86WJ1 897 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 RIOX2Q8IUF8 465 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 ARMC8Q8IUR7 673 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 CCDC103Q8IW40 242 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms