RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 PRKCBP05771 671 aa17.64■□□□□ 0.41
LMX1B-204ENST00000561065 PDIA4P13667 645 aaKnown RBP17.64■□□□□ 0.41
LMX1B-204ENST00000561065 ALADP13716 330 aa17.64■□□□□ 0.41
LMX1B-204ENST00000561065 PRPHP41219 470 aa17.64■□□□□ 0.41
LMX1B-204ENST00000561065 ATP2C1P98194 919 aaPredicted RBP17.64■□□□□ 0.41
LMX1B-204ENST00000561065 NCBP1Q09161 790 aaKnown RBP17.64■□□□□ 0.41
LMX1B-204ENST00000561065 HERC4Q5GLZ8 1057 aaPredicted RBP17.64■□□□□ 0.41
LMX1B-204ENST00000561065 EEF1DP3Q658K8 133 aa17.64■□□□□ 0.41
LMX1B-204ENST00000561065 KANK3Q6NY19 840 aa17.64■□□□□ 0.41
LMX1B-204ENST00000561065 TAS1R1Q7RTX1 841 aa17.64■□□□□ 0.41
LMX1B-204ENST00000561065 ZBTB8OSQ8IWT0 167 aa17.64■□□□□ 0.41
LMX1B-204ENST00000561065 DAW1Q8N136 415 aa17.64■□□□□ 0.41
LMX1B-204ENST00000561065 SLC22A17Q8WUG5 538 aa17.64■□□□□ 0.41
LMX1B-204ENST00000561065 FAM193BQ96PV7 902 aaPredicted RBP17.64■□□□□ 0.41
LMX1B-204ENST00000561065 KLK14Q9P0G3 267 aa17.64■□□□□ 0.41
LMX1B-204ENST00000561065 FAN1Q9Y2M0 1017 aa17.64■□□□□ 0.41
LMX1B-204ENST00000561065 VWA8A3KMH1 1905 aa17.64■□□□□ 0.41
LMX1B-204ENST00000561065 ZNF318Q5VUA4 2279 aa17.63■□□□□ 0.41
LMX1B-204ENST00000561065 WDFY4Q6ZS81 3184 aa17.63■□□□□ 0.41
LMX1B-204ENST00000561065 HOXB8P17481 243 aaPredicted RBP17.63■□□□□ 0.41
LMX1B-204ENST00000561065 OR1G1P47890 313 aa17.63■□□□□ 0.41
LMX1B-204ENST00000561065 C12orf76Q8N812 135 aaPredicted RBP17.63■□□□□ 0.41
LMX1B-204ENST00000561065 INTS4Q96HW7 963 aaKnown RBP17.63■□□□□ 0.41
LMX1B-204ENST00000561065 RPGRIP1Q96KN7 1286 aa17.63■□□□□ 0.41
LMX1B-204ENST00000561065 RUSC1Q9BVN2 902 aa17.63■□□□□ 0.41
LMX1B-204ENST00000561065 HERC2P3Q9BVR0 1158 aa17.63■□□□□ 0.41
LMX1B-204ENST00000561065 C2orf40Q9H1Z8 148 aa17.63■□□□□ 0.41
LMX1B-204ENST00000561065 PRR33A8MZF0 331 aa17.62■□□□□ 0.41
LMX1B-204ENST00000561065 BMP15O95972 392 aa17.62■□□□□ 0.41
LMX1B-204ENST00000561065 SOD2P04179 222 aa17.62■□□□□ 0.41
LMX1B-204ENST00000561065 ALDH2P05091 517 aa17.62■□□□□ 0.41
LMX1B-204ENST00000561065 CNPP09543 421 aaKnown RBP17.62■□□□□ 0.41
LMX1B-204ENST00000561065 WEE2P0C1S8 567 aa17.62■□□□□ 0.41
LMX1B-204ENST00000561065 LIG1P18858 919 aa17.62■□□□□ 0.41
LMX1B-204ENST00000561065 SP100P23497 879 aaPredicted RBP17.62■□□□□ 0.41
LMX1B-204ENST00000561065 GRIK3Q13003 919 aa17.62■□□□□ 0.41
LMX1B-204ENST00000561065 MAPK7Q13164 816 aa17.62■□□□□ 0.41
LMX1B-204ENST00000561065 CUL4AQ13619 759 aa17.62■□□□□ 0.41
LMX1B-204ENST00000561065 MAPK6Q16659 721 aa17.62■□□□□ 0.41
LMX1B-204ENST00000561065 DTHD1Q6ZMT9 781 aa17.62■□□□□ 0.41
LMX1B-204ENST00000561065 BRAPQ7Z569 592 aa17.62■□□□□ 0.41
LMX1B-204ENST00000561065 DEPTORQ8TB45 409 aa17.62■□□□□ 0.41
LMX1B-204ENST00000561065 RABGGTAQ92696 567 aa17.62■□□□□ 0.41
LMX1B-204ENST00000561065 KLHL5Q96PQ7 755 aa17.62■□□□□ 0.41
LMX1B-204ENST00000561065 PAAF1Q9BRP4 392 aa17.62■□□□□ 0.41
LMX1B-204ENST00000561065 POMKQ9H5K3 350 aa17.62■□□□□ 0.41
LMX1B-204ENST00000561065 ACKR2O00590 384 aa17.61■□□□□ 0.41
LMX1B-204ENST00000561065 PTGESO14684 152 aa17.61■□□□□ 0.41
LMX1B-204ENST00000561065 N4BP3O15049 544 aa17.61■□□□□ 0.41
LMX1B-204ENST00000561065 RECQL4O94761 1208 aa17.61■□□□□ 0.41
LMX1B-204ENST00000561065 PRPF4BQ13523 1007 aaKnown RBP17.61■□□□□ 0.41
LMX1B-204ENST00000561065 GIT2Q14161 759 aa17.61■□□□□ 0.41
LMX1B-204ENST00000561065 RARS2Q5T160 578 aaKnown RBP17.61■□□□□ 0.41
LMX1B-204ENST00000561065 NT5DC1Q5TFE4 455 aa17.61■□□□□ 0.41
LMX1B-204ENST00000561065 KCTD17Q8N5Z5 321 aa17.61■□□□□ 0.41
LMX1B-204ENST00000561065 B3GALT6Q96L58 329 aa17.61■□□□□ 0.41
LMX1B-204ENST00000561065 PNMA5Q96PV4 448 aa17.61■□□□□ 0.41
LMX1B-204ENST00000561065 ADAM7Q9H2U9 754 aa17.61■□□□□ 0.41
LMX1B-204ENST00000561065 SNTG2Q9NY99 539 aa17.61■□□□□ 0.41
LMX1B-204ENST00000561065 DAXXQ9UER7 740 aaPredicted RBP17.61■□□□□ 0.41
LMX1B-204ENST00000561065 PARP2Q9UGN5 583 aa17.61■□□□□ 0.41
LMX1B-204ENST00000561065 PDCD11Q14690 1871 aaKnown RBP17.61■□□□□ 0.41
LMX1B-204ENST00000561065 KMT2EQ8IZD2 1858 aa17.6■□□□□ 0.41
LMX1B-204ENST00000561065 C2CD2LO14523 706 aa17.6■□□□□ 0.41
LMX1B-204ENST00000561065 HIP1RO75146 1068 aa17.6■□□□□ 0.41
LMX1B-204ENST00000561065 HSP90AA1P07900 732 aaKnown RBP17.6■□□□□ 0.41
LMX1B-204ENST00000561065 CLCN4P51793 760 aa17.6■□□□□ 0.41
LMX1B-204ENST00000561065 BMS1Q14692 1282 aaKnown RBP17.6■□□□□ 0.41
LMX1B-204ENST00000561065 PPP2R5AQ15172 486 aa17.6■□□□□ 0.41
LMX1B-204ENST00000561065 NAB2Q15742 525 aa17.6■□□□□ 0.41
LMX1B-204ENST00000561065 TPRNQ4KMQ1 711 aa17.6■□□□□ 0.41
LMX1B-204ENST00000561065 HYIQ5T013 277 aa17.6■□□□□ 0.41
LMX1B-204ENST00000561065 KRT79Q5XKE5 535 aa17.6■□□□□ 0.41
LMX1B-204ENST00000561065 TAS1R3Q7RTX0 852 aa17.6■□□□□ 0.41
LMX1B-204ENST00000561065 HACE1Q8IYU2 909 aa17.6■□□□□ 0.41
LMX1B-204ENST00000561065 LRRC15Q8TF66 581 aa17.6■□□□□ 0.41
LMX1B-204ENST00000561065 KIFAP3Q92845 792 aa17.6■□□□□ 0.41
LMX1B-204ENST00000561065 GPR62Q9BZJ7 368 aa17.6■□□□□ 0.41
LMX1B-204ENST00000561065 DZANK1Q9NVP4 752 aa17.6■□□□□ 0.41
LMX1B-204ENST00000561065 MTCL1Q9Y4B5 1905 aaKnown RBP17.6■□□□□ 0.41
LMX1B-204ENST00000561065 MUC6Q6W4X9 2439 aa17.59■□□□□ 0.41
LMX1B-204ENST00000561065 K7ELQ4 463 aaPredicted RBP17.59■□□□□ 0.41
LMX1B-204ENST00000561065 URODP06132 367 aa17.59■□□□□ 0.41
LMX1B-204ENST00000561065 NPTX2P47972 431 aa17.59■□□□□ 0.41
LMX1B-204ENST00000561065 ARL6IP4Q66PJ3 421 aaKnown RBP17.59■□□□□ 0.41
LMX1B-204ENST00000561065 KIAA1841Q6NSI8 718 aa17.59■□□□□ 0.41
LMX1B-204ENST00000561065 RINT1Q6NUQ1 792 aa17.59■□□□□ 0.41
LMX1B-204ENST00000561065 FUT10Q6P4F1 479 aa17.59■□□□□ 0.41
LMX1B-204ENST00000561065 C1orf186Q6ZWK4 172 aa17.59■□□□□ 0.41
LMX1B-204ENST00000561065 RPS6KC1Q96S38 1066 aa17.59■□□□□ 0.41
LMX1B-204ENST00000561065 CITO14578 2027 aa17.59■□□□□ 0.41
LMX1B-204ENST00000561065 PHLPP2Q6ZVD8 1323 aa17.58■□□□□ 0.41
LMX1B-204ENST00000561065 VWA3AA6NCI4 1184 aa17.58■□□□□ 0.4
LMX1B-204ENST00000561065 TEX28O15482 410 aa17.58■□□□□ 0.4
LMX1B-204ENST00000561065 GLUD2P49448 558 aa17.58■□□□□ 0.4
LMX1B-204ENST00000561065 PEX3P56589 373 aa17.58■□□□□ 0.4
LMX1B-204ENST00000561065 ITIH3Q06033 890 aa17.58■□□□□ 0.4
LMX1B-204ENST00000561065 KIAA0319Q5VV43 1072 aa17.58■□□□□ 0.4
LMX1B-204ENST00000561065 HFE2Q6ZVN8 426 aa17.58■□□□□ 0.4
LMX1B-204ENST00000561065 HSCBQ8IWL3 235 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms