RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 NPTXRO95502 500 aa10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 RPN1P04843 607 aaKnown RBP10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 CA3P07451 260 aa10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 MYBP10242 640 aa10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 FGFR1P11362 822 aa10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 ITGA4P13612 1032 aa10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 MYOGP15173 224 aa10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 GRM5P41594 1212 aa10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 ERVK-21P61565 698 aa10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 SNRPFP62306 86 aaKnown RBP10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 POU5F1Q01860 360 aaKnown RBP10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 TAP1Q03518 808 aa10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 POSTNQ15063 836 aa10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 BMT2Q1RMZ1 405 aa10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 KMT5BQ4FZB7 885 aa10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 XKR4Q5GH76 650 aa10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 SLFN12LQ6IEE8 588 aa10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 FAM117BQ6P1L5 589 aa10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 SLC39A4Q6P5W5 647 aa10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 CDR2LQ86X02 465 aaPredicted RBP10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 LRCH3Q96II8 777 aa10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 SAMD11Q96NU1 681 aa10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 GSDMAQ96QA5 445 aa10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 ACCSQ96QU6 501 aa10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 TRIM6Q9C030 488 aaPredicted RBP10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 CDT1Q9H211 546 aa10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 NKX2-4Q9H2Z4 354 aa10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 TMEM206Q9H813 350 aa10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 SLC28A3Q9HAS3 691 aa10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 KANSL3Q9P2N6 904 aa10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 HOOK1Q9UJC3 728 aaKnown RBP10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 USP20Q9Y2K6 914 aa10.55□□□□□ -0.72
RABGGTA-221ENST00000561055 A0A0B4J269 797 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 MEIS3P2A8K0S8 358 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 C5orf67F2Z3F1 127 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 HNRNPDLO14979 420 aaKnown RBP10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 FAM189A1O60320 539 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 KINO60870 393 aaKnown RBP10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 ARHGEF15O94989 841 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 PRR29P0C7W0 189 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 HOXD13P35453 343 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 LIG4P49917 911 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 KCNA1Q09470 495 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 STK4Q13043 487 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 BTG3Q14201 252 aaPredicted RBP10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 KYAT1Q16773 422 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 ZNF568Q3ZCX4 644 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 GLB1LQ6UWU2 654 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 ALKAL1Q6UXT8 129 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 LRRC55Q6ZSA7 311 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 ABI1Q8IZP0 508 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 FIBCD1Q8N539 461 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 GSTCDQ8NEC7 633 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 TMEM174Q8WUU8 243 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 LPPQ93052 612 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 CCDC47Q96A33 483 aaKnown RBP10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 ZBTB45Q96K62 511 aaPredicted RBP10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 MRPL9Q9BYD2 267 aaKnown RBP10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 FGFBP2Q9BYJ0 223 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 GTPBP4Q9BZE4 634 aaKnown RBP10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 HAPLN2Q9GZV7 340 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 RNF39Q9H2S5 420 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 NXF3Q9H4D5 531 aaKnown RBP10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 ZNF576Q9H609 170 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 CWH43Q9H720 699 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 RSAD1Q9HA92 442 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 EXOC1Q9NV70 894 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 TBC1D7Q9P0N9 293 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 RWDD3Q9Y3V2 267 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 HES2Q9Y543 173 aa10.54□□□□□ -0.72
RABGGTA-221ENST00000561055 MTCL1Q9Y4B5 1905 aaKnown RBP10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 CARNS1A5YM72 827 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 ARL5CA6NH57 179 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 TBKBP1A7MCY6 615 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 ANKRD63C9JTQ0 380 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 GOLGA6L22H0YM25 854 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 OGTO15294 1046 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 PRPF6O94906 941 aaKnown RBP10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 RB1P06400 928 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 ADRB2P07550 413 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 GARTP22102 1010 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 ADSSP30520 456 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 GATMP50440 423 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 PNOCQ13519 176 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 NOLC1Q14978 699 aaKnown RBP eCLIP10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 TMEM132AQ24JP5 1023 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 TPRNQ4KMQ1 711 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 COBLL1Q53SF7 1204 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 NOMO2Q5JPE7 1267 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 PPP2R2DQ66LE6 453 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 C12orf56Q8IXR9 622 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 LRRC43Q8N309 656 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 KIAA0895Q8NCT3 520 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 GLIS3Q8NEA6 775 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 HELQQ8TDG4 1101 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 SCFD1Q8WVM8 642 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 P2RX5Q93086 422 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 HPS3Q969F9 1004 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 TGS1Q96RS0 853 aaKnown RBP10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 TCHPQ9BT92 498 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms