RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 NCLP19338 710 aaKnown RBP11.91□□□□□ -0.5
TPM1-227ENST00000560970 KLRC2P26717 231 aa11.91□□□□□ -0.5
TPM1-227ENST00000560970 YWHABP31946 246 aaKnown RBP11.91□□□□□ -0.5
TPM1-227ENST00000560970 NBL1P41271 181 aa11.91□□□□□ -0.5
TPM1-227ENST00000560970 LAMTOR4Q0VGL1 99 aa11.91□□□□□ -0.5
TPM1-227ENST00000560970 PTGDRQ13258 359 aa11.91□□□□□ -0.5
TPM1-227ENST00000560970 PCBP1Q15365 356 aaKnown RBP eCLIP11.91□□□□□ -0.54e-6■□□□□ 10.4
TPM1-227ENST00000560970 IL17AQ16552 155 aa11.91□□□□□ -0.5
TPM1-227ENST00000560970 UBXN11Q5T124 520 aa11.91□□□□□ -0.5
TPM1-227ENST00000560970 MRPL10Q7Z7H8 261 aaKnown RBP11.91□□□□□ -0.5
TPM1-227ENST00000560970 C4orf19Q8IY42 314 aa11.91□□□□□ -0.5
TPM1-227ENST00000560970 ZNF579Q8NAF0 562 aaKnown RBP11.91□□□□□ -0.5
TPM1-227ENST00000560970 RNF149Q8NC42 400 aa11.91□□□□□ -0.5
TPM1-227ENST00000560970 CNNM3Q8NE01 707 aa11.91□□□□□ -0.5
TPM1-227ENST00000560970 FEZF2Q8TBJ5 459 aa11.91□□□□□ -0.5
TPM1-227ENST00000560970 TMEM143Q96AN5 459 aa11.91□□□□□ -0.5
TPM1-227ENST00000560970 CCDC51Q96ER9 411 aa11.91□□□□□ -0.5
TPM1-227ENST00000560970 SNX27Q96L92 541 aa11.91□□□□□ -0.5
TPM1-227ENST00000560970 KLHL5Q96PQ7 755 aa11.91□□□□□ -0.5
TPM1-227ENST00000560970 MTRQ99707 1265 aa11.91□□□□□ -0.5
TPM1-227ENST00000560970 MINDY3Q9H8M7 445 aa11.91□□□□□ -0.5
TPM1-227ENST00000560970 LIMD1Q9UGP4 676 aa11.91□□□□□ -0.5
TPM1-227ENST00000560970 MTMR6Q9Y217 621 aa11.91□□□□□ -0.5
TPM1-227ENST00000560970 MYH11P35749 1972 aa11.9□□□□□ -0.5
TPM1-227ENST00000560970 CLUHO75153 1309 aa11.9□□□□□ -0.5
TPM1-227ENST00000560970 PRR23AA6NEV1 266 aa11.9□□□□□ -0.5
TPM1-227ENST00000560970 ZBTB39O15060 712 aa11.9□□□□□ -0.5
TPM1-227ENST00000560970 INPPL1O15357 1258 aa11.9□□□□□ -0.5
TPM1-227ENST00000560970 TSPAN1O60635 241 aa11.9□□□□□ -0.5
TPM1-227ENST00000560970 MED24O75448 989 aa11.9□□□□□ -0.5
TPM1-227ENST00000560970 SLITRK3O94933 977 aa11.9□□□□□ -0.5
TPM1-227ENST00000560970 GLUD1P00367 558 aa11.9□□□□□ -0.5
TPM1-227ENST00000560970 POMCP01189 267 aa11.9□□□□□ -0.5
TPM1-227ENST00000560970 SRGAP2CP0DJJ0 459 aa11.9□□□□□ -0.5
TPM1-227ENST00000560970 HOXA11P31270 313 aaPredicted RBP11.9□□□□□ -0.5
TPM1-227ENST00000560970 MLH1P40692 756 aa11.9□□□□□ -0.5
TPM1-227ENST00000560970 GLUD2P49448 558 aa11.9□□□□□ -0.5
TPM1-227ENST00000560970 CLCN5P51795 746 aa11.9□□□□□ -0.5
TPM1-227ENST00000560970 AFF1P51825 1210 aaKnown RBP11.9□□□□□ -0.5
TPM1-227ENST00000560970 RILPL1Q5EBL4 403 aa11.9□□□□□ -0.5
TPM1-227ENST00000560970 NOTUMQ6P988 496 aa11.9□□□□□ -0.5
TPM1-227ENST00000560970 RNF168Q8IYW5 571 aaPredicted RBP11.9□□□□□ -0.5
TPM1-227ENST00000560970 CMASQ8NFW8 434 aaPredicted RBP11.9□□□□□ -0.5
TPM1-227ENST00000560970 PRPF31Q8WWY3 499 aaKnown RBP11.9□□□□□ -0.5
TPM1-227ENST00000560970 DOCK6Q96HP0 2047 aa11.9□□□□□ -0.5
TPM1-227ENST00000560970 HSD17B14Q9BPX1 270 aa11.9□□□□□ -0.5
TPM1-227ENST00000560970 UBN1Q9NPG3 1134 aa11.9□□□□□ -0.5
TPM1-227ENST00000560970 SSX2IPQ9Y2D8 614 aa11.9□□□□□ -0.5
TPM1-227ENST00000560970 FAN1Q9Y2M0 1017 aa11.9□□□□□ -0.5
TPM1-227ENST00000560970 PRG3Q9Y2Y8 225 aaPredicted RBP11.9□□□□□ -0.5
TPM1-227ENST00000560970 IPPQ9Y573 584 aa11.9□□□□□ -0.5
TPM1-227ENST00000560970 FAM186AA6NE01 2351 aa11.9□□□□□ -0.51
TPM1-227ENST00000560970 DCHS1Q96JQ0 3298 aa11.89□□□□□ -0.51
TPM1-227ENST00000560970 C2CD2LO14523 706 aa11.89□□□□□ -0.51
TPM1-227ENST00000560970 NRP1O14786 923 aa11.89□□□□□ -0.51
TPM1-227ENST00000560970 LILRB3O75022 631 aa11.89□□□□□ -0.51
TPM1-227ENST00000560970 SPATA31C1P0DKV0 1188 aa11.89□□□□□ -0.51
TPM1-227ENST00000560970 ITGA4P13612 1032 aa11.89□□□□□ -0.51
TPM1-227ENST00000560970 PDCP20941 246 aa11.89□□□□□ -0.51
TPM1-227ENST00000560970 AXLP30530 894 aa11.89□□□□□ -0.51
TPM1-227ENST00000560970 FXR2P51116 673 aaKnown RBP eCLIP11.89□□□□□ -0.51
TPM1-227ENST00000560970 ATP2C1P98194 919 aaPredicted RBP11.89□□□□□ -0.51
TPM1-227ENST00000560970 DSC1Q08554 894 aa11.89□□□□□ -0.51
TPM1-227ENST00000560970 TDGQ13569 410 aa11.89□□□□□ -0.51
TPM1-227ENST00000560970 XKR9Q5GH70 373 aa11.89□□□□□ -0.51
TPM1-227ENST00000560970 FAM173BQ6P4H8 233 aa11.89□□□□□ -0.51
TPM1-227ENST00000560970 OTUD6AQ7L8S5 288 aa11.89□□□□□ -0.51
TPM1-227ENST00000560970 BRAPQ7Z569 592 aa11.89□□□□□ -0.51
TPM1-227ENST00000560970 COLGALT2Q8IYK4 626 aa11.89□□□□□ -0.51
TPM1-227ENST00000560970 HACE1Q8IYU2 909 aa11.89□□□□□ -0.51
TPM1-227ENST00000560970 SPRYD3Q8NCJ5 442 aa11.89□□□□□ -0.51
TPM1-227ENST00000560970 SMG8Q8ND04 991 aaKnown RBP11.89□□□□□ -0.51
TPM1-227ENST00000560970 FLCNQ8NFG4 579 aa11.89□□□□□ -0.51
TPM1-227ENST00000560970 STAMQ92783 540 aa11.89□□□□□ -0.51
TPM1-227ENST00000560970 IPO9Q96P70 1041 aaKnown RBP11.89□□□□□ -0.51
TPM1-227ENST00000560970 RPS6KC1Q96S38 1066 aa11.89□□□□□ -0.51
TPM1-227ENST00000560970 RHOBTB2Q9BYZ6 727 aa11.89□□□□□ -0.51
TPM1-227ENST00000560970 ZSWIM4Q9H7M6 989 aa11.89□□□□□ -0.51
TPM1-227ENST00000560970 DPP7Q9UHL4 492 aa11.89□□□□□ -0.51
TPM1-227ENST00000560970 DMXL1Q9Y485 3027 aa11.88□□□□□ -0.51
TPM1-227ENST00000560970 A0A087WWV3 80 aa11.88□□□□□ -0.51
TPM1-227ENST00000560970 ARL5CA6NH57 179 aa11.88□□□□□ -0.51
TPM1-227ENST00000560970 PP2D1A8MPX8 630 aa11.88□□□□□ -0.51
TPM1-227ENST00000560970 TEX28O15482 410 aa11.88□□□□□ -0.51
TPM1-227ENST00000560970 ASAP2O43150 1006 aa11.88□□□□□ -0.51
TPM1-227ENST00000560970 STX6O43752 255 aa11.88□□□□□ -0.51
TPM1-227ENST00000560970 LYPLA2O95372 231 aa11.88□□□□□ -0.51
TPM1-227ENST00000560970 ALDH2P05091 517 aa11.88□□□□□ -0.51
TPM1-227ENST00000560970 AOC1P19801 751 aa11.88□□□□□ -0.51
TPM1-227ENST00000560970 OR1G1P47890 313 aa11.88□□□□□ -0.51
TPM1-227ENST00000560970 SCNN1GP51170 649 aa11.88□□□□□ -0.51
TPM1-227ENST00000560970 MBTD1Q05BQ5 628 aa11.88□□□□□ -0.51
TPM1-227ENST00000560970 TFDP1Q14186 410 aa11.88□□□□□ -0.51
TPM1-227ENST00000560970 MXD4Q14582 209 aaPredicted RBP11.88□□□□□ -0.51
TPM1-227ENST00000560970 ECM1Q16610 540 aa11.88□□□□□ -0.51
TPM1-227ENST00000560970 POTEGQ6S5H5 508 aa11.88□□□□□ -0.51
TPM1-227ENST00000560970 CYP26C1Q6V0L0 522 aa11.88□□□□□ -0.51
TPM1-227ENST00000560970 ASCL5Q7RTU5 278 aa11.88□□□□□ -0.51
TPM1-227ENST00000560970 IFNLR1Q8IU57 520 aaPredicted RBP11.88□□□□□ -0.51
TPM1-227ENST00000560970 TPH2Q8IWU9 490 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms