RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 KANSL3Q9P2N6 904 aa16.78■□□□□ 0.28
SNRPA1-213ENST00000560856 DNAJB4Q9UDY4 337 aa16.78■□□□□ 0.28
SNRPA1-213ENST00000560856 PLXNA4Q9HCM2 1894 aa16.78■□□□□ 0.28
SNRPA1-213ENST00000560856 SPTBN5Q9NRC6 3674 aaKnown RBP16.77■□□□□ 0.28
SNRPA1-213ENST00000560856 FRMD3A2A2Y4 597 aa16.77■□□□□ 0.28
SNRPA1-213ENST00000560856 NT5C1B-RDH14C9J2C7 533 aa16.77■□□□□ 0.28
SNRPA1-213ENST00000560856 TRAK2O60296 914 aa16.77■□□□□ 0.28
SNRPA1-213ENST00000560856 POMCP01189 267 aa16.77■□□□□ 0.28
SNRPA1-213ENST00000560856 NMT1P30419 496 aaKnown RBP16.77■□□□□ 0.28
SNRPA1-213ENST00000560856 IRS1P35568 1242 aa16.77■□□□□ 0.28
SNRPA1-213ENST00000560856 SCNN1GP51170 649 aa16.77■□□□□ 0.28
SNRPA1-213ENST00000560856 UBE3AQ05086 875 aa16.77■□□□□ 0.28
SNRPA1-213ENST00000560856 DSC1Q08554 894 aa16.77■□□□□ 0.28
SNRPA1-213ENST00000560856 DCAF4L1Q3SXM0 396 aa16.77■□□□□ 0.28
SNRPA1-213ENST00000560856 TMEM173Q86WV6 379 aaPredicted RBP16.77■□□□□ 0.28
SNRPA1-213ENST00000560856 THNSL1Q8IYQ7 743 aa16.77■□□□□ 0.28
SNRPA1-213ENST00000560856 URGCPQ8TCY9 931 aa16.77■□□□□ 0.28
SNRPA1-213ENST00000560856 BCL7CQ8WUZ0 217 aaPredicted RBP16.77■□□□□ 0.28
SNRPA1-213ENST00000560856 STAMQ92783 540 aa16.77■□□□□ 0.28
SNRPA1-213ENST00000560856 ADPGKQ9BRR6 497 aa16.77■□□□□ 0.28
SNRPA1-213ENST00000560856 STRA6Q9BX79 667 aa16.77■□□□□ 0.28
SNRPA1-213ENST00000560856 CUEDC2Q9H467 287 aa16.77■□□□□ 0.28
SNRPA1-213ENST00000560856 ST6GALNAC4Q9H4F1 302 aa16.77■□□□□ 0.28
SNRPA1-213ENST00000560856 SPG21Q9NZD8 308 aa16.77■□□□□ 0.28
SNRPA1-213ENST00000560856 KLK14Q9P0G3 267 aa16.77■□□□□ 0.28
SNRPA1-213ENST00000560856 LZTS1Q9Y250 596 aa16.77■□□□□ 0.28
SNRPA1-213ENST00000560856 ATP6V1DQ9Y5K8 247 aa16.77■□□□□ 0.28
SNRPA1-213ENST00000560856 H0YCG3 227 aa16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 PTGESO14684 152 aa16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 POLR2DO15514 142 aaKnown RBP16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 ZC3H11AO75152 810 aaKnown RBP eCLIP16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 TBCAO75347 108 aaKnown RBP16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 PPP1R37O75864 691 aa16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 RECQL4O94761 1208 aa16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 SLC11A1P49279 550 aa16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 ERVFC1P60507 584 aa16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 NUCB2P80303 420 aa16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 GTF2BQ00403 316 aa16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 COL19A1Q14993 1142 aa16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 TMEM132AQ24JP5 1023 aa16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 TIGD5Q53EQ6 642 aa16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 TCEAL5Q5H9L2 206 aa16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 ADALQ6DHV7 355 aa16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 ZPBP2Q6X784 338 aa16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 SFR1Q86XK3 245 aa16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 COLGALT2Q8IYK4 626 aa16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 HACE1Q8IYU2 909 aa16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 CEP120Q8N960 986 aa16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 IQUBQ8NA54 791 aa16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 MRPS27Q92552 414 aaKnown RBP16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 DHX58Q96C10 678 aa16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 SPATA32Q96LK8 384 aa16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 HAPLN2Q9GZV7 340 aa16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 NSUN3Q9H649 340 aaKnown RBP16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 PARP2Q9UGN5 583 aa16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 TBX20Q9UMR3 447 aa16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 UNC80Q8N2C7 3258 aa16.76■□□□□ 0.27
SNRPA1-213ENST00000560856 FAM237AA0A1B0GTK4 181 aa16.75■□□□□ 0.27
SNRPA1-213ENST00000560856 FSCN2O14926 492 aa16.75■□□□□ 0.27
SNRPA1-213ENST00000560856 MEFVO15553 781 aaPredicted RBP16.75■□□□□ 0.27
SNRPA1-213ENST00000560856 TOM1L1O75674 476 aa16.75■□□□□ 0.27
SNRPA1-213ENST00000560856 PIGRP01833 764 aa16.75■□□□□ 0.27
SNRPA1-213ENST00000560856 SCP2P22307 547 aa16.75■□□□□ 0.27
SNRPA1-213ENST00000560856 CMA1P23946 247 aa16.75■□□□□ 0.27
SNRPA1-213ENST00000560856 PPM1AP35813 382 aa16.75■□□□□ 0.27
SNRPA1-213ENST00000560856 ALDH7A1P49419 539 aaKnown RBP16.75■□□□□ 0.27
SNRPA1-213ENST00000560856 RNASELQ05823 741 aaKnown RBP16.75■□□□□ 0.27
SNRPA1-213ENST00000560856 STRN3Q13033 797 aa16.75■□□□□ 0.27
SNRPA1-213ENST00000560856 NAB2Q15742 525 aa16.75■□□□□ 0.27
SNRPA1-213ENST00000560856 CNNM4Q6P4Q7 775 aa16.75■□□□□ 0.27
SNRPA1-213ENST00000560856 MPZL3Q6UWV2 235 aa16.75■□□□□ 0.27
SNRPA1-213ENST00000560856 ZNF720Q7Z2F6 126 aa16.75■□□□□ 0.27
SNRPA1-213ENST00000560856 FAM178BQ8IXR5 827 aa16.75■□□□□ 0.27
SNRPA1-213ENST00000560856 IGSF21Q96ID5 467 aa16.75■□□□□ 0.27
SNRPA1-213ENST00000560856 TMEM175Q9BSA9 504 aa16.75■□□□□ 0.27
SNRPA1-213ENST00000560856 SCAND2PQ9GZW5 306 aaPredicted RBP16.75■□□□□ 0.27
SNRPA1-213ENST00000560856 GBP3Q9H0R5 595 aa16.75■□□□□ 0.27
SNRPA1-213ENST00000560856 TNMDQ9H2S6 317 aa16.75■□□□□ 0.27
SNRPA1-213ENST00000560856 ZHX3Q9H4I2 956 aa16.75■□□□□ 0.27
SNRPA1-213ENST00000560856 SEL1LQ9UBV2 794 aa16.75■□□□□ 0.27
SNRPA1-213ENST00000560856 HPSEQ9Y251 543 aa16.75■□□□□ 0.27
SNRPA1-213ENST00000560856 PCDHGC5Q9Y5F6 944 aa16.75■□□□□ 0.27
SNRPA1-213ENST00000560856 K7ENM7 598 aa16.74■□□□□ 0.27
SNRPA1-213ENST00000560856 EFEMP2O95967 443 aa16.74■□□□□ 0.27
SNRPA1-213ENST00000560856 MCF2P10911 925 aa16.74■□□□□ 0.27
SNRPA1-213ENST00000560856 GAP43P17677 238 aa16.74■□□□□ 0.27
SNRPA1-213ENST00000560856 GRM5P41594 1212 aa16.74■□□□□ 0.27
SNRPA1-213ENST00000560856 MCL1Q07820 350 aa16.74■□□□□ 0.27
SNRPA1-213ENST00000560856 ZNF568Q3ZCX4 644 aa16.74■□□□□ 0.27
SNRPA1-213ENST00000560856 ZC2HC1CQ53FD0 456 aaPredicted RBP16.74■□□□□ 0.27
SNRPA1-213ENST00000560856 XKR4Q5GH76 650 aa16.74■□□□□ 0.27
SNRPA1-213ENST00000560856 SLC39A4Q6P5W5 647 aa16.74■□□□□ 0.27
SNRPA1-213ENST00000560856 ALKAL1Q6UXT8 129 aa16.74■□□□□ 0.27
SNRPA1-213ENST00000560856 ADGRD2Q7Z7M1 963 aa16.74■□□□□ 0.27
SNRPA1-213ENST00000560856 ZBTB33Q86T24 672 aa16.74■□□□□ 0.27
SNRPA1-213ENST00000560856 VN1R3Q9BXE9 311 aa16.74■□□□□ 0.27
SNRPA1-213ENST00000560856 TRIM9Q9C026 710 aa16.74■□□□□ 0.27
SNRPA1-213ENST00000560856 GDPD2Q9HCC8 539 aa16.74■□□□□ 0.27
SNRPA1-213ENST00000560856 FAM13BQ9NYF5 915 aa16.74■□□□□ 0.27
SNRPA1-213ENST00000560856 KCNH3Q9ULD8 1083 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms