RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 USP49Q70CQ1 688 aa14.27□□□□□ -0.13
CTDSPL2-209ENST00000560620 ADAMTS19Q8TE59 1207 aa14.27□□□□□ -0.13
CTDSPL2-209ENST00000560620 LARP4BQ92615 738 aaKnown RBP14.27□□□□□ -0.13
CTDSPL2-209ENST00000560620 RAD54LQ92698 747 aa14.27□□□□□ -0.13
CTDSPL2-209ENST00000560620 TCHPQ9BT92 498 aa14.27□□□□□ -0.13
CTDSPL2-209ENST00000560620 MRPL4Q9BYD3 311 aaKnown RBP14.27□□□□□ -0.13
CTDSPL2-209ENST00000560620 CCSER1Q9C0I3 900 aa14.27□□□□□ -0.13
CTDSPL2-209ENST00000560620 GDAQ9Y2T3 454 aa14.27□□□□□ -0.13
CTDSPL2-209ENST00000560620 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.26□□□□□ -0.13
CTDSPL2-209ENST00000560620 SPTLC2O15270 562 aa14.26□□□□□ -0.13
CTDSPL2-209ENST00000560620 TBCAO75347 108 aaKnown RBP14.26□□□□□ -0.13
CTDSPL2-209ENST00000560620 F13A1P00488 732 aa14.26□□□□□ -0.13
CTDSPL2-209ENST00000560620 MATR3P43243 847 aaKnown RBP eCLIP14.26□□□□□ -0.13
CTDSPL2-209ENST00000560620 MAPK7Q13164 816 aa14.26□□□□□ -0.13
CTDSPL2-209ENST00000560620 CLUL1Q15846 466 aa14.26□□□□□ -0.13
CTDSPL2-209ENST00000560620 DCAF4L1Q3SXM0 396 aa14.26□□□□□ -0.13
CTDSPL2-209ENST00000560620 ZNF568Q3ZCX4 644 aa14.26□□□□□ -0.13
CTDSPL2-209ENST00000560620 RRAGBQ5VZM2 374 aa14.26□□□□□ -0.13
CTDSPL2-209ENST00000560620 ZBTB33Q86T24 672 aa14.26□□□□□ -0.13
CTDSPL2-209ENST00000560620 VPS52Q8N1B4 723 aa14.26□□□□□ -0.13
CTDSPL2-209ENST00000560620 MYCT1Q8N699 235 aa14.26□□□□□ -0.13
CTDSPL2-209ENST00000560620 IGSF21Q96ID5 467 aa14.26□□□□□ -0.13
CTDSPL2-209ENST00000560620 REEP2Q9BRK0 252 aa14.26□□□□□ -0.13
CTDSPL2-209ENST00000560620 PANK2Q9BZ23 570 aa14.26□□□□□ -0.13
CTDSPL2-209ENST00000560620 TMEM134Q9H6X4 195 aa14.26□□□□□ -0.13
CTDSPL2-209ENST00000560620 NGRNQ9NPE2 291 aaKnown RBP14.26□□□□□ -0.13
CTDSPL2-209ENST00000560620 SNTG2Q9NY99 539 aa14.26□□□□□ -0.13
CTDSPL2-209ENST00000560620 ODF2LQ9ULJ1 636 aa14.26□□□□□ -0.13
CTDSPL2-209ENST00000560620 PRG3Q9Y2Y8 225 aaPredicted RBP14.26□□□□□ -0.13
CTDSPL2-209ENST00000560620 TCF20Q9UGU0 1960 aaKnown RBP14.25□□□□□ -0.13
CTDSPL2-209ENST00000560620 TDRD15B5MCY1 1934 aaKnown RBP14.25□□□□□ -0.13
CTDSPL2-209ENST00000560620 MYH15Q9Y2K3 1946 aa14.25□□□□□ -0.13
CTDSPL2-209ENST00000560620 NRP1O14786 923 aa14.25□□□□□ -0.13
CTDSPL2-209ENST00000560620 LINC01565O15544 149 aa14.25□□□□□ -0.13
CTDSPL2-209ENST00000560620 EDN1P05305 212 aa14.25□□□□□ -0.13
CTDSPL2-209ENST00000560620 HARSP12081 509 aaKnown RBP14.25□□□□□ -0.13
CTDSPL2-209ENST00000560620 DDIT3P35638 169 aa14.25□□□□□ -0.13
CTDSPL2-209ENST00000560620 STAT6P42226 847 aa14.25□□□□□ -0.13
CTDSPL2-209ENST00000560620 NASPP49321 788 aaPredicted RBP14.25□□□□□ -0.13
CTDSPL2-209ENST00000560620 SMC1AQ14683 1233 aaKnown RBP14.25□□□□□ -0.13
CTDSPL2-209ENST00000560620 ARSHQ5FYA8 562 aa14.25□□□□□ -0.13
CTDSPL2-209ENST00000560620 NT5DC1Q5TFE4 455 aa14.25□□□□□ -0.13
CTDSPL2-209ENST00000560620 EEF1DP3Q658K8 133 aa14.25□□□□□ -0.13
CTDSPL2-209ENST00000560620 PTCRAQ6ISU1 281 aaPredicted RBP14.25□□□□□ -0.13
CTDSPL2-209ENST00000560620 TMEM173Q86WV6 379 aaPredicted RBP14.25□□□□□ -0.13
CTDSPL2-209ENST00000560620 LINC00301Q8NCQ3 95 aa14.25□□□□□ -0.13
CTDSPL2-209ENST00000560620 BICD1Q96G01 975 aa14.25□□□□□ -0.13
CTDSPL2-209ENST00000560620 UHRF1Q96T88 793 aaPredicted RBP14.25□□□□□ -0.13
CTDSPL2-209ENST00000560620 TARS2Q9BW92 718 aaKnown RBP14.25□□□□□ -0.13
CTDSPL2-209ENST00000560620 BLOC1S4Q9NUP1 217 aa14.25□□□□□ -0.13
CTDSPL2-209ENST00000560620 ARHGAP28Q9P2N2 729 aa14.25□□□□□ -0.13
CTDSPL2-209ENST00000560620 STK17AQ9UEE5 414 aa14.25□□□□□ -0.13
CTDSPL2-209ENST00000560620 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 HIDE1A8MVS5 230 aa14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 H0YCG3 227 aa14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 K7ENM7 598 aa14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 B4GALT3O60512 393 aa14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 RECQL4O94761 1208 aa14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 CXCL14O95715 111 aa14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 SRGAP2BP0DMP2 458 aa14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 BMP1P13497 986 aa14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 YARSP54577 528 aaKnown RBP14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 OSTNP61366 133 aa14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 GRIK3Q13003 919 aa14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 ADAM15Q13444 863 aa14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 PKP1Q13835 747 aa14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 LEXMQ3ZCV2 418 aa14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 LLGL2Q6P1M3 1020 aa14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 CCDC73Q6ZRK6 1079 aa14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 SV2BQ7L1I2 683 aa14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 DYMQ7RTS9 669 aa14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 DDX53Q86TM3 631 aaKnown RBP14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 PDILTQ8N807 584 aa14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 LRRC15Q8TF66 581 aa14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 SPIRE2Q8WWL2 714 aa14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 ACO2Q99798 780 aaKnown RBP14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 TMEM175Q9BSA9 504 aa14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 NTPCRQ9BSD7 190 aaKnown RBP14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 PARVGQ9HBI0 331 aa14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 MIOSQ9NXC5 875 aa14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 ANKFY1Q9P2R3 1169 aa14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 FAM50BQ9Y247 325 aa14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 TNFSF13BQ9Y275 285 aa14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 VCANP13611 3396 aa14.24□□□□□ -0.13
CTDSPL2-209ENST00000560620 FSD2A1L4K1 749 aa14.23□□□□□ -0.13
CTDSPL2-209ENST00000560620 FSCN2O14926 492 aa14.23□□□□□ -0.13
CTDSPL2-209ENST00000560620 YEATS4O95619 227 aa14.23□□□□□ -0.13
CTDSPL2-209ENST00000560620 THP07101 528 aa14.23□□□□□ -0.13
CTDSPL2-209ENST00000560620 DLX2Q07687 328 aaPredicted RBP14.23□□□□□ -0.13
CTDSPL2-209ENST00000560620 GIT2Q14161 759 aa14.23□□□□□ -0.13
CTDSPL2-209ENST00000560620 BECN1Q14457 450 aa14.23□□□□□ -0.13
CTDSPL2-209ENST00000560620 PUS10Q3MIT2 529 aaKnown RBP14.23□□□□□ -0.13
CTDSPL2-209ENST00000560620 TAS1R3Q7RTX0 852 aa14.23□□□□□ -0.13
CTDSPL2-209ENST00000560620 HAUS6Q7Z4H7 955 aa14.23□□□□□ -0.13
CTDSPL2-209ENST00000560620 COLGALT2Q8IYK4 626 aa14.23□□□□□ -0.13
CTDSPL2-209ENST00000560620 EFHBQ8N7U6 833 aa14.23□□□□□ -0.13
CTDSPL2-209ENST00000560620 TMEM161BQ8NDZ6 487 aa14.23□□□□□ -0.13
CTDSPL2-209ENST00000560620 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.23□□□□□ -0.13
CTDSPL2-209ENST00000560620 BCL7CQ8WUZ0 217 aaPredicted RBP14.23□□□□□ -0.13
CTDSPL2-209ENST00000560620 AUTS2Q8WXX7 1259 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms