RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 CBX4O00257 560 aa4.31□□□□□ -1.72
SPG11-222ENST00000560435 ELL2O00472 640 aaPredicted RBP4.31□□□□□ -1.72
SPG11-222ENST00000560435 NRP2O60462 931 aa4.31□□□□□ -1.72
SPG11-222ENST00000560435 CDKL5O76039 1030 aa4.31□□□□□ -1.72
SPG11-222ENST00000560435 FOSP01100 380 aaPredicted RBP4.31□□□□□ -1.72
SPG11-222ENST00000560435 GPR15P49685 360 aa4.31□□□□□ -1.72
SPG11-222ENST00000560435 SIM1P81133 766 aaPredicted RBP4.31□□□□□ -1.72
SPG11-222ENST00000560435 APBA1Q02410 837 aa4.31□□□□□ -1.72
SPG11-222ENST00000560435 SCAPQ12770 1279 aa4.31□□□□□ -1.72
SPG11-222ENST00000560435 CCDC178Q5BJE1 867 aa4.31□□□□□ -1.72
SPG11-222ENST00000560435 METRNLQ641Q3 311 aa4.31□□□□□ -1.72
SPG11-222ENST00000560435 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.31□□□□□ -1.72
SPG11-222ENST00000560435 ZMAT4Q9H898 229 aa4.31□□□□□ -1.72
SPG11-222ENST00000560435 TOMM22Q9NS69 142 aa4.31□□□□□ -1.72
SPG11-222ENST00000560435 SNTG2Q9NY99 539 aa4.31□□□□□ -1.72
SPG11-222ENST00000560435 USP15Q9Y4E8 981 aaPredicted RBP4.31□□□□□ -1.72
SPG11-222ENST00000560435 ST20-MTHFSA0A0A6YYL1 179 aa4.3□□□□□ -1.72
SPG11-222ENST00000560435 TBKBP1A7MCY6 615 aa4.3□□□□□ -1.72
SPG11-222ENST00000560435 PROP1O75360 226 aa4.3□□□□□ -1.72
SPG11-222ENST00000560435 CFIP05156 583 aa4.3□□□□□ -1.72
SPG11-222ENST00000560435 PFKMP08237 780 aa4.3□□□□□ -1.72
SPG11-222ENST00000560435 CD40P25942 277 aa4.3□□□□□ -1.72
SPG11-222ENST00000560435 ABCG1P45844 678 aa4.3□□□□□ -1.72
SPG11-222ENST00000560435 RARRES1P49788 294 aa4.3□□□□□ -1.72
SPG11-222ENST00000560435 PIK3R6Q5UE93 754 aa4.3□□□□□ -1.72
SPG11-222ENST00000560435 ANKS6Q68DC2 871 aa4.3□□□□□ -1.72
SPG11-222ENST00000560435 ARHGEF25Q86VW2 580 aa4.3□□□□□ -1.72
SPG11-222ENST00000560435 Q8N9P0 234 aaPredicted RBP4.3□□□□□ -1.72
SPG11-222ENST00000560435 TFAP2CQ92754 450 aa4.3□□□□□ -1.72
SPG11-222ENST00000560435 CDC5LQ99459 802 aaKnown RBP4.3□□□□□ -1.72
SPG11-222ENST00000560435 DNAJC7Q99615 494 aa4.3□□□□□ -1.72
SPG11-222ENST00000560435 KRTAP1-5Q9BYS1 174 aa4.3□□□□□ -1.72
SPG11-222ENST00000560435 SLC29A3Q9BZD2 475 aa4.3□□□□□ -1.72
SPG11-222ENST00000560435 KMT5AQ9NQR1 393 aa4.3□□□□□ -1.72
SPG11-222ENST00000560435 POGKQ9P215 609 aa4.3□□□□□ -1.72
SPG11-222ENST00000560435 PTCH2Q9Y6C5 1203 aa4.3□□□□□ -1.72
SPG11-222ENST00000560435 MGST3O14880 152 aa4.29□□□□□ -1.72
SPG11-222ENST00000560435 OPA1O60313 960 aa4.29□□□□□ -1.72
SPG11-222ENST00000560435 CLEC2LP0C7M8 214 aa4.29□□□□□ -1.72
SPG11-222ENST00000560435 XPAP23025 273 aaPredicted RBP4.29□□□□□ -1.72
SPG11-222ENST00000560435 CACNA2D1P54289 1103 aa4.29□□□□□ -1.72
SPG11-222ENST00000560435 NRG3P56975 720 aa4.29□□□□□ -1.72
SPG11-222ENST00000560435 LRRC32Q14392 662 aa4.29□□□□□ -1.72
SPG11-222ENST00000560435 ZNF460Q14592 562 aa4.29□□□□□ -1.72
SPG11-222ENST00000560435 BMT2Q1RMZ1 405 aa4.29□□□□□ -1.72
SPG11-222ENST00000560435 LMBR1LQ6UX01 489 aa4.29□□□□□ -1.72
SPG11-222ENST00000560435 ESPNLQ6ZVH7 1005 aa4.29□□□□□ -1.72
SPG11-222ENST00000560435 GAB3Q8WWW8 586 aa4.29□□□□□ -1.72
SPG11-222ENST00000560435 FERMT2Q96AC1 680 aa4.29□□□□□ -1.72
SPG11-222ENST00000560435 FUBP1Q96AE4 644 aaKnown RBP4.29□□□□□ -1.72
SPG11-222ENST00000560435 Q96MF0 132 aa4.29□□□□□ -1.72
SPG11-222ENST00000560435 NEU1Q99519 415 aa4.29□□□□□ -1.72
SPG11-222ENST00000560435 OXSMQ9NWU1 459 aa4.29□□□□□ -1.72
SPG11-222ENST00000560435 USP18Q9UMW8 372 aa4.29□□□□□ -1.72
SPG11-222ENST00000560435 ZMYM3Q14202 1370 aa4.28□□□□□ -1.72
SPG11-222ENST00000560435 LRRC3CA6NJW4 275 aa4.28□□□□□ -1.72
SPG11-222ENST00000560435 CGB1A6NKQ9 187 aa4.28□□□□□ -1.72
SPG11-222ENST00000560435 DNAJC8O75937 253 aaPredicted RBP4.28□□□□□ -1.72
SPG11-222ENST00000560435 RAPGEF3O95398 923 aa4.28□□□□□ -1.72
SPG11-222ENST00000560435 LTA4HP09960 611 aaKnown RBP4.28□□□□□ -1.72
SPG11-222ENST00000560435 ZNF81P51508 661 aa4.28□□□□□ -1.72
SPG11-222ENST00000560435 MGAT5Q09328 741 aa4.28□□□□□ -1.72
SPG11-222ENST00000560435 UBE3CQ15386 1083 aa4.28□□□□□ -1.72
SPG11-222ENST00000560435 FNDC3BQ53EP0 1204 aaKnown RBP4.28□□□□□ -1.72
SPG11-222ENST00000560435 C2orf27AQ580R0 203 aa4.28□□□□□ -1.72
SPG11-222ENST00000560435 ZBTB41Q5SVQ8 909 aa4.28□□□□□ -1.72
SPG11-222ENST00000560435 AGAP9Q5VTM2 703 aa4.28□□□□□ -1.72
SPG11-222ENST00000560435 Q6ZNX1 250 aa4.28□□□□□ -1.72
SPG11-222ENST00000560435 GPR149Q86SP6 731 aa4.28□□□□□ -1.72
SPG11-222ENST00000560435 ZNF366Q8N895 744 aa4.28□□□□□ -1.72
SPG11-222ENST00000560435 RNF169Q8NCN4 708 aa4.28□□□□□ -1.72
SPG11-222ENST00000560435 ZFP28Q8NHY6 868 aa4.28□□□□□ -1.72
SPG11-222ENST00000560435 CLUHP3Q96NS8 147 aa4.28□□□□□ -1.72
SPG11-222ENST00000560435 FOXJ2Q9P0K8 574 aa4.28□□□□□ -1.72
SPG11-222ENST00000560435 IKBKBO14920 756 aa4.27□□□□□ -1.73
SPG11-222ENST00000560435 ZFPL1O95159 310 aa4.27□□□□□ -1.73
SPG11-222ENST00000560435 FLT3P36888 993 aa4.27□□□□□ -1.73
SPG11-222ENST00000560435 KRTAP10-7P60409 375 aaPredicted RBP4.27□□□□□ -1.73
SPG11-222ENST00000560435 UBE2R2Q712K3 238 aaPredicted RBP4.27□□□□□ -1.73
SPG11-222ENST00000560435 GLB1L2Q8IW92 636 aa4.27□□□□□ -1.73
SPG11-222ENST00000560435 SH2D3CQ8N5H7 860 aa4.27□□□□□ -1.73
SPG11-222ENST00000560435 PDLIM2Q96JY6 352 aa4.27□□□□□ -1.73
SPG11-222ENST00000560435 ZNF778Q96MU6 729 aa4.27□□□□□ -1.73
SPG11-222ENST00000560435 HIRIP3Q9BW71 556 aaPredicted RBP4.27□□□□□ -1.73
SPG11-222ENST00000560435 ATP11BQ9Y2G3 1177 aa4.27□□□□□ -1.73
SPG11-222ENST00000560435 ATP2B1P20020 1258 aa4.26□□□□□ -1.73
SPG11-222ENST00000560435 CHN2P52757 468 aa4.26□□□□□ -1.73
SPG11-222ENST00000560435 MEF2AQ02078 507 aaPredicted RBP4.26□□□□□ -1.73
SPG11-222ENST00000560435 SRSF4Q08170 494 aaKnown RBP4.26□□□□□ -1.73
SPG11-222ENST00000560435 SPDYE7PQ495Y7 208 aa4.26□□□□□ -1.73
SPG11-222ENST00000560435 C19orf54Q5BKX5 351 aa4.26□□□□□ -1.73
SPG11-222ENST00000560435 CDCA2Q69YH5 1023 aaPredicted RBP4.26□□□□□ -1.73
SPG11-222ENST00000560435 RHOT2Q8IXI1 618 aa4.26□□□□□ -1.73
SPG11-222ENST00000560435 EFHBQ8N7U6 833 aa4.26□□□□□ -1.73
SPG11-222ENST00000560435 OR56A1Q8NGH5 318 aa4.26□□□□□ -1.73
SPG11-222ENST00000560435 ALOXE3Q9BYJ1 711 aa4.26□□□□□ -1.73
SPG11-222ENST00000560435 MTFR1LQ9H019 292 aa4.26□□□□□ -1.73
SPG11-222ENST00000560435 KLK15Q9H2R5 256 aa4.26□□□□□ -1.73
SPG11-222ENST00000560435 H2AFY2Q9P0M6 372 aaPredicted RBP4.26□□□□□ -1.73
SPG11-222ENST00000560435 SLC17A6Q9P2U8 582 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms