RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 ZFP42Q96MM3 310 aa14.55□□□□□ -0.08
SMAD3-213ENST00000560175 VN1R3Q9BXE9 311 aa14.55□□□□□ -0.08
SMAD3-213ENST00000560175 TRIM6Q9C030 488 aaPredicted RBP14.55□□□□□ -0.08
SMAD3-213ENST00000560175 KMT5AQ9NQR1 393 aa14.55□□□□□ -0.08
SMAD3-213ENST00000560175 STK39Q9UEW8 545 aa14.55□□□□□ -0.08
SMAD3-213ENST00000560175 INPP5FQ9Y2H2 1132 aa14.55□□□□□ -0.08
SMAD3-213ENST00000560175 USP20Q9Y2K6 914 aa14.55□□□□□ -0.08
SMAD3-213ENST00000560175 PCDHGC5Q9Y5F6 944 aa14.55□□□□□ -0.08
SMAD3-213ENST00000560175 CCDC169A6NNP5 214 aa14.54□□□□□ -0.08
SMAD3-213ENST00000560175 NRP1O14786 923 aa14.54□□□□□ -0.08
SMAD3-213ENST00000560175 LINC01565O15544 149 aa14.54□□□□□ -0.08
SMAD3-213ENST00000560175 LILRB3O75022 631 aa14.54□□□□□ -0.08
SMAD3-213ENST00000560175 PPP6R2O75170 966 aa14.54□□□□□ -0.08
SMAD3-213ENST00000560175 GLP2RO95838 553 aa14.54□□□□□ -0.08
SMAD3-213ENST00000560175 POMCP01189 267 aa14.54□□□□□ -0.08
SMAD3-213ENST00000560175 ZSCAN22P10073 491 aaPredicted RBP14.54□□□□□ -0.08
SMAD3-213ENST00000560175 SCP2P22307 547 aa14.54□□□□□ -0.08
SMAD3-213ENST00000560175 AKAP5P24588 427 aa14.54□□□□□ -0.08
SMAD3-213ENST00000560175 MLH1P40692 756 aa14.54□□□□□ -0.08
SMAD3-213ENST00000560175 NCKAP1LP55160 1127 aa14.54□□□□□ -0.08
SMAD3-213ENST00000560175 RNASELQ05823 741 aaKnown RBP14.54□□□□□ -0.08
SMAD3-213ENST00000560175 GIT2Q14161 759 aa14.54□□□□□ -0.08
SMAD3-213ENST00000560175 NAB2Q15742 525 aa14.54□□□□□ -0.08
SMAD3-213ENST00000560175 DUSP6Q16828 381 aa14.54□□□□□ -0.08
SMAD3-213ENST00000560175 ATF7IP2Q5U623 682 aa14.54□□□□□ -0.08
SMAD3-213ENST00000560175 ADAMTS19Q8TE59 1207 aa14.54□□□□□ -0.08
SMAD3-213ENST00000560175 LARP4BQ92615 738 aaKnown RBP14.54□□□□□ -0.08
SMAD3-213ENST00000560175 TMEM169Q96HH4 297 aa14.54□□□□□ -0.08
SMAD3-213ENST00000560175 CLIC6Q96NY7 704 aa14.54□□□□□ -0.08
SMAD3-213ENST00000560175 FIZ1Q96SL8 496 aa14.54□□□□□ -0.08
SMAD3-213ENST00000560175 TCF25Q9BQ70 676 aa14.54□□□□□ -0.08
SMAD3-213ENST00000560175 ZBP1Q9H171 429 aa14.54□□□□□ -0.08
SMAD3-213ENST00000560175 TLE6Q9H808 572 aa14.54□□□□□ -0.08
SMAD3-213ENST00000560175 CLDND1Q9NY35 253 aa14.54□□□□□ -0.08
SMAD3-213ENST00000560175 CLEC1BQ9P126 229 aa14.54□□□□□ -0.08
SMAD3-213ENST00000560175 LARSQ9P2J5 1176 aaKnown RBP14.54□□□□□ -0.08
SMAD3-213ENST00000560175 STK17AQ9UEE5 414 aa14.54□□□□□ -0.08
SMAD3-213ENST00000560175 FAN1Q9Y2M0 1017 aa14.54□□□□□ -0.08
SMAD3-213ENST00000560175 C5orf42Q9H799 3197 aa14.53□□□□□ -0.08
SMAD3-213ENST00000560175 NPHP3-ACAD11A0A0J9YXS1 232 aa14.53□□□□□ -0.08
SMAD3-213ENST00000560175 C2orf71A6NGG8 1288 aa14.53□□□□□ -0.08
SMAD3-213ENST00000560175 HIDE1A8MVS5 230 aa14.53□□□□□ -0.08
SMAD3-213ENST00000560175 TBX10O75333 385 aa14.53□□□□□ -0.08
SMAD3-213ENST00000560175 YEATS4O95619 227 aa14.53□□□□□ -0.08
SMAD3-213ENST00000560175 CTSAP10619 480 aa14.53□□□□□ -0.08
SMAD3-213ENST00000560175 MAPTP10636 758 aaKnown RBP14.53□□□□□ -0.08
SMAD3-213ENST00000560175 NRIP1P48552 1158 aa14.53□□□□□ -0.08
SMAD3-213ENST00000560175 SCNN1GP51170 649 aa14.53□□□□□ -0.08
SMAD3-213ENST00000560175 SMTNP53814 917 aa14.53□□□□□ -0.08
SMAD3-213ENST00000560175 GRIK3Q13003 919 aa14.53□□□□□ -0.08
SMAD3-213ENST00000560175 COASYQ13057 564 aa14.53□□□□□ -0.08
SMAD3-213ENST00000560175 MCM6Q14566 821 aa14.53□□□□□ -0.08
SMAD3-213ENST00000560175 DCAF4L1Q3SXM0 396 aa14.53□□□□□ -0.08
SMAD3-213ENST00000560175 XKR4Q5GH76 650 aa14.53□□□□□ -0.08
SMAD3-213ENST00000560175 SPECC1Q5M775 1068 aa14.53□□□□□ -0.08
SMAD3-213ENST00000560175 ATL3Q6DD88 541 aa14.53□□□□□ -0.08
SMAD3-213ENST00000560175 ALKAL1Q6UXT8 129 aa14.53□□□□□ -0.08
SMAD3-213ENST00000560175 KRI1Q8N9T8 703 aaKnown RBP14.53□□□□□ -0.08
SMAD3-213ENST00000560175 MICAL1Q8TDZ2 1067 aa14.53□□□□□ -0.08
SMAD3-213ENST00000560175 REEP2Q9BRK0 252 aa14.53□□□□□ -0.08
SMAD3-213ENST00000560175 ADPGKQ9BRR6 497 aa14.53□□□□□ -0.08
SMAD3-213ENST00000560175 MRPL4Q9BYD3 311 aaKnown RBP14.53□□□□□ -0.08
SMAD3-213ENST00000560175 MARCH5Q9NX47 278 aa14.53□□□□□ -0.08
SMAD3-213ENST00000560175 CITO14578 2027 aa14.53□□□□□ -0.08
SMAD3-213ENST00000560175 PTGESO14684 152 aa14.52□□□□□ -0.09
SMAD3-213ENST00000560175 SLC16A4O15374 487 aa14.52□□□□□ -0.09
SMAD3-213ENST00000560175 F13A1P00488 732 aa14.52□□□□□ -0.09
SMAD3-213ENST00000560175 SSBP05455 408 aaKnown RBP eCLIP14.52□□□□□ -0.09
SMAD3-213ENST00000560175 CEBPZQ03701 1054 aaKnown RBP14.52□□□□□ -0.09
SMAD3-213ENST00000560175 RAD51AP2Q09MP3 1159 aa14.52□□□□□ -0.09
SMAD3-213ENST00000560175 SMC1AQ14683 1233 aaKnown RBP14.52□□□□□ -0.09
SMAD3-213ENST00000560175 ZPBP2Q6X784 338 aa14.52□□□□□ -0.09
SMAD3-213ENST00000560175 TMC7Q7Z402 723 aa14.52□□□□□ -0.09
SMAD3-213ENST00000560175 GPBP1Q86WP2 473 aa14.52□□□□□ -0.09
SMAD3-213ENST00000560175 GPR65Q8IYL9 337 aa14.52□□□□□ -0.09
SMAD3-213ENST00000560175 VPS52Q8N1B4 723 aa14.52□□□□□ -0.09
SMAD3-213ENST00000560175 VN1R2Q8NFZ6 395 aa14.52□□□□□ -0.09
SMAD3-213ENST00000560175 ZNF396Q96N95 335 aaPredicted RBP14.52□□□□□ -0.09
SMAD3-213ENST00000560175 FAM193BQ96PV7 902 aaPredicted RBP14.52□□□□□ -0.09
SMAD3-213ENST00000560175 IGFLR1Q9H665 355 aa14.52□□□□□ -0.09
SMAD3-213ENST00000560175 SNTG2Q9NY99 539 aa14.52□□□□□ -0.09
SMAD3-213ENST00000560175 TFIP11Q9UBB9 837 aaKnown RBP14.52□□□□□ -0.09
SMAD3-213ENST00000560175 CCDC39Q9UFE4 941 aa14.52□□□□□ -0.09
SMAD3-213ENST00000560175 H0YCG3 227 aa14.51□□□□□ -0.09
SMAD3-213ENST00000560175 H3BQ06 376 aaPredicted RBP14.51□□□□□ -0.09
SMAD3-213ENST00000560175 PER2O15055 1255 aa14.51□□□□□ -0.09
SMAD3-213ENST00000560175 SPTLC2O15270 562 aa14.51□□□□□ -0.09
SMAD3-213ENST00000560175 RECQL4O94761 1208 aa14.51□□□□□ -0.09
SMAD3-213ENST00000560175 CXCL14O95715 111 aa14.51□□□□□ -0.09
SMAD3-213ENST00000560175 PIGRP01833 764 aa14.51□□□□□ -0.09
SMAD3-213ENST00000560175 GRM5P41594 1212 aa14.51□□□□□ -0.09
SMAD3-213ENST00000560175 PKP1Q13835 747 aa14.51□□□□□ -0.09
SMAD3-213ENST00000560175 PLPP4Q5VZY2 271 aa14.51□□□□□ -0.09
SMAD3-213ENST00000560175 PTCRAQ6ISU1 281 aaPredicted RBP14.51□□□□□ -0.09
SMAD3-213ENST00000560175 HAUS6Q7Z4H7 955 aa14.51□□□□□ -0.09
SMAD3-213ENST00000560175 APBB1IPQ7Z5R6 666 aaPredicted RBP14.51□□□□□ -0.09
SMAD3-213ENST00000560175 RBM23Q86U06 439 aaKnown RBP14.51□□□□□ -0.09
SMAD3-213ENST00000560175 FAM178BQ8IXR5 827 aa14.51□□□□□ -0.09
SMAD3-213ENST00000560175 DNAJC19Q96DA6 116 aa14.51□□□□□ -0.09
SMAD3-213ENST00000560175 UHRF1Q96T88 793 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms