RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 ZMYND15Q9H091 742 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 AP5M1Q9H0R1 490 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 UPF3AQ9H1J1 476 aaKnown RBP5.79□□□□□ -1.48
SPG11-220ENST00000559933 ZHX3Q9H4I2 956 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 AZI2Q9H6S1 392 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 ZSWIM4Q9H7M6 989 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 XPNPEP1Q9NQW7 623 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 KBTBD4Q9NVX7 518 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 DDX20Q9UHI6 824 aaKnown RBP5.79□□□□□ -1.48
SPG11-220ENST00000559933 MAN1B1Q9UKM7 699 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 MAPK8IP1Q9UQF2 711 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 PCDHA5Q9Y5H7 936 aa5.79□□□□□ -1.48
SPG11-220ENST00000559933 MKI67P46013 3256 aaKnown RBP5.79□□□□□ -1.48
SPG11-220ENST00000559933 NKRFO15226 690 aaKnown RBP eCLIP5.78□□□□□ -1.48
SPG11-220ENST00000559933 DUSP11O75319 330 aaKnown RBP5.78□□□□□ -1.48
SPG11-220ENST00000559933 LYPLA2O95372 231 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 F2P00734 622 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 ALBP02768 609 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 RPN1P04843 607 aaKnown RBP5.78□□□□□ -1.48
SPG11-220ENST00000559933 ASGR1P07306 291 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 SMIM10L2AP0DMW4 78 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 SMIM10L2BP0DMW5 78 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 MYBP10242 640 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 HOXD8P13378 290 aaPredicted RBP5.78□□□□□ -1.48
SPG11-220ENST00000559933 NFKB1P19838 968 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 PTMSP20962 102 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 CLCN3P51790 818 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 PRMT2P55345 433 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 GJA9P57773 515 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 PURAQ00577 322 aaKnown RBP5.78□□□□□ -1.48
SPG11-220ENST00000559933 COASYQ13057 564 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 MAPK7Q13164 816 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 GIT2Q14161 759 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 EMC2Q15006 297 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 LRRC41Q15345 812 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 KCNA10Q16322 511 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 DGKDQ16760 1214 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 SWI5Q1ZZU3 235 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 KIAA0753Q2KHM9 967 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 SKOR2Q2VWA4 1001 aaPredicted RBP5.78□□□□□ -1.48
SPG11-220ENST00000559933 DPCR1Q3MIW9 517 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 XKR3Q5GH77 459 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 FAM102BQ5T8I3 360 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 FAM160B1Q5W0V3 765 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 CCSAPQ6IQ19 270 aaPredicted RBP5.78□□□□□ -1.48
SPG11-220ENST00000559933 C1orf186Q6ZWK4 172 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 SV2BQ7L1I2 683 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 SFR1Q86XK3 245 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 C4orf19Q8IY42 314 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 MICALL1Q8N3F8 863 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 SYT2Q8N9I0 419 aaPredicted RBP5.78□□□□□ -1.48
SPG11-220ENST00000559933 GIMAP8Q8ND71 665 aaPredicted RBP5.78□□□□□ -1.48
SPG11-220ENST00000559933 RDM1Q8NG50 284 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 NEK9Q8TD19 979 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 ATP8B4Q8TF62 1192 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 WNT8BQ93098 351 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 SMARCE1Q969G3 411 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 TMEM143Q96AN5 459 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 CCDC43Q96MW1 224 aaKnown RBP5.78□□□□□ -1.48
SPG11-220ENST00000559933 TIGD1Q96MW7 591 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 DEFB118Q96PH6 123 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 NACC1Q96RE7 527 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 FUCA2Q9BTY2 467 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 GSX2Q9BZM3 304 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 NT5C3AQ9H0P0 336 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 RNF208Q9H0X6 261 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 DNAJC25Q9H1X3 360 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 PRDM6Q9NQX0 595 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 CYP26B1Q9NR63 512 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 SETD4Q9NVD3 440 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 NRBP1Q9UHY1 535 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 DNM3Q9UQ16 869 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 USP20Q9Y2K6 914 aa5.78□□□□□ -1.48
SPG11-220ENST00000559933 GRIN2DO15399 1336 aa5.77□□□□□ -1.49
SPG11-220ENST00000559933 ADGRA3Q8IWK6 1321 aa5.77□□□□□ -1.49
SPG11-220ENST00000559933 SCN10AQ9Y5Y9 1956 aa5.77□□□□□ -1.49
SPG11-220ENST00000559933 H3BRB1 525 aa5.77□□□□□ -1.49
SPG11-220ENST00000559933 MICAL2O94851 1124 aa5.77□□□□□ -1.49
SPG11-220ENST00000559933 C22orf31O95567 290 aa5.77□□□□□ -1.49
SPG11-220ENST00000559933 VTNP04004 478 aa5.77□□□□□ -1.49
SPG11-220ENST00000559933 ITGB2P05107 769 aa5.77□□□□□ -1.49
SPG11-220ENST00000559933 KRT18P05783 430 aaKnown RBP5.77□□□□□ -1.49
SPG11-220ENST00000559933 INSRRP14616 1297 aa5.77□□□□□ -1.49
SPG11-220ENST00000559933 NMT1P30419 496 aaKnown RBP5.77□□□□□ -1.49
SPG11-220ENST00000559933 CPT1AP50416 773 aa5.77□□□□□ -1.49
SPG11-220ENST00000559933 POLGP54098 1239 aaPredicted RBP5.77□□□□□ -1.49
SPG11-220ENST00000559933 PMS1P54277 932 aaKnown RBP5.77□□□□□ -1.49
SPG11-220ENST00000559933 TMEM62Q0P6H9 643 aa5.77□□□□□ -1.49
SPG11-220ENST00000559933 PPFIA1Q13136 1202 aa5.77□□□□□ -1.49
SPG11-220ENST00000559933 ARHGEF6Q15052 776 aa5.77□□□□□ -1.49
SPG11-220ENST00000559933 TARBP2Q15633 366 aaKnown RBP5.77□□□□□ -1.49
SPG11-220ENST00000559933 GRIK4Q16099 956 aa5.77□□□□□ -1.49
SPG11-220ENST00000559933 ANO6Q4KMQ2 910 aa5.77□□□□□ -1.49
SPG11-220ENST00000559933 ZC2HC1CQ53FD0 456 aaPredicted RBP5.77□□□□□ -1.49
SPG11-220ENST00000559933 MARCH8Q5T0T0 291 aa5.77□□□□□ -1.49
SPG11-220ENST00000559933 KLHL10Q6JEL2 608 aa5.77□□□□□ -1.49
SPG11-220ENST00000559933 FBXO46Q6PJ61 603 aaPredicted RBP5.77□□□□□ -1.49
SPG11-220ENST00000559933 RBM43Q6ZSC3 357 aaKnown RBP5.77□□□□□ -1.49
SPG11-220ENST00000559933 PLPPR4Q7Z2D5 763 aa5.77□□□□□ -1.49
SPG11-220ENST00000559933 CD163Q86VB7 1156 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms