RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 RTP1P59025 263 aa19.32■□□□□ 0.68
SNX1-208ENST00000559844 PURAQ00577 322 aaKnown RBP19.32■□□□□ 0.68
SNX1-208ENST00000559844 SLC18A3Q16572 532 aa19.32■□□□□ 0.68
SNX1-208ENST00000559844 CCSAPQ6IQ19 270 aaPredicted RBP19.32■□□□□ 0.68
SNX1-208ENST00000559844 CXCL17Q6UXB2 119 aa19.32■□□□□ 0.68
SNX1-208ENST00000559844 TRAPPC11Q7Z392 1133 aa19.32■□□□□ 0.68
SNX1-208ENST00000559844 GPR161Q8N6U8 529 aaKnown RBP19.32■□□□□ 0.68
SNX1-208ENST00000559844 ALS2CR12Q96Q35 445 aa19.32■□□□□ 0.68
SNX1-208ENST00000559844 SH2D3AQ9BRG2 576 aa19.32■□□□□ 0.68
SNX1-208ENST00000559844 GPRC5CQ9NQ84 441 aa19.32■□□□□ 0.68
SNX1-208ENST00000559844 ARGLU1Q9NWB6 273 aaPredicted RBP19.32■□□□□ 0.68
SNX1-208ENST00000559844 SCN10AQ9Y5Y9 1956 aa19.32■□□□□ 0.68
SNX1-208ENST00000559844 MACROD2A1Z1Q3 448 aa19.32■□□□□ 0.68
SNX1-208ENST00000559844 H3BRB1 525 aa19.32■□□□□ 0.68
SNX1-208ENST00000559844 KPNA6O60684 536 aa19.32■□□□□ 0.68
SNX1-208ENST00000559844 TFRCP02786 760 aaKnown RBP19.32■□□□□ 0.68
SNX1-208ENST00000559844 XKR3Q5GH77 459 aa19.32■□□□□ 0.68
SNX1-208ENST00000559844 C10orf76Q5T2E6 689 aa19.32■□□□□ 0.68
SNX1-208ENST00000559844 PLPPR4Q7Z2D5 763 aa19.32■□□□□ 0.68
SNX1-208ENST00000559844 XXYLT1Q8NBI6 393 aa19.32■□□□□ 0.68
SNX1-208ENST00000559844 CRISPLD2Q9H0B8 497 aa19.32■□□□□ 0.68
SNX1-208ENST00000559844 TUT1Q9H6E5 874 aaKnown RBP19.32■□□□□ 0.68
SNX1-208ENST00000559844 ERAP1Q9NZ08 941 aa19.32■□□□□ 0.68
SNX1-208ENST00000559844 SEPT9Q9UHD8 586 aaPredicted RBP19.32■□□□□ 0.68
SNX1-208ENST00000559844 CCDC169A6NNP5 214 aa19.31■□□□□ 0.68
SNX1-208ENST00000559844 KBTBD13C9JR72 458 aa19.31■□□□□ 0.68
SNX1-208ENST00000559844 F2P00734 622 aa19.31■□□□□ 0.68
SNX1-208ENST00000559844 H2AFXP16104 143 aaPredicted RBP19.31■□□□□ 0.68
SNX1-208ENST00000559844 PRKCIP41743 596 aa19.31■□□□□ 0.68
SNX1-208ENST00000559844 GJA8P48165 433 aa19.31■□□□□ 0.68
SNX1-208ENST00000559844 MYL7Q01449 175 aa19.31■□□□□ 0.68
SNX1-208ENST00000559844 PRKCEQ02156 737 aa19.31■□□□□ 0.68
SNX1-208ENST00000559844 TEX35Q5T0J7 233 aa19.31■□□□□ 0.68
SNX1-208ENST00000559844 NTPCRQ9BSD7 190 aaKnown RBP19.31■□□□□ 0.68
SNX1-208ENST00000559844 ATP6V0A4Q9HBG4 840 aa19.31■□□□□ 0.68
SNX1-208ENST00000559844 KMT5AQ9NQR1 393 aa19.31■□□□□ 0.68
SNX1-208ENST00000559844 SAR1BQ9Y6B6 198 aa19.31■□□□□ 0.68
SNX1-208ENST00000559844 ARID2Q68CP9 1835 aa19.31■□□□□ 0.68
SNX1-208ENST00000559844 H0YCG3 227 aa19.3■□□□□ 0.68
SNX1-208ENST00000559844 P4HA2O15460 535 aa19.3■□□□□ 0.68
SNX1-208ENST00000559844 NPTX2P47972 431 aa19.3■□□□□ 0.68
SNX1-208ENST00000559844 ACLYP53396 1101 aa19.3■□□□□ 0.68
SNX1-208ENST00000559844 JAM2P57087 298 aa19.3■□□□□ 0.68
SNX1-208ENST00000559844 CETN1Q12798 172 aa19.3■□□□□ 0.68
SNX1-208ENST00000559844 FBXO38Q6PIJ6 1188 aa19.3■□□□□ 0.68
SNX1-208ENST00000559844 IRF2BP2Q7Z5L9 587 aa19.3■□□□□ 0.68
SNX1-208ENST00000559844 MAP4K3Q8IVH8 894 aa19.3■□□□□ 0.68
SNX1-208ENST00000559844 RNF10Q8N5U6 811 aaKnown RBP19.3■□□□□ 0.68
SNX1-208ENST00000559844 TMEM161BQ8NDZ6 487 aa19.3■□□□□ 0.68
SNX1-208ENST00000559844 KAT2BQ92831 832 aa19.3■□□□□ 0.68
SNX1-208ENST00000559844 MTG1Q9BT17 334 aaPredicted RBP19.3■□□□□ 0.68
SNX1-208ENST00000559844 CYP26B1Q9NR63 512 aa19.3■□□□□ 0.68
SNX1-208ENST00000559844 HSPBP1Q9NZL4 362 aa19.3■□□□□ 0.68
SNX1-208ENST00000559844 TBX20Q9UMR3 447 aa19.3■□□□□ 0.68
SNX1-208ENST00000559844 DUSP10Q9Y6W6 482 aa19.3■□□□□ 0.68
SNX1-208ENST00000559844 CTAGE15A4D2H0 777 aa19.3■□□□□ 0.68
SNX1-208ENST00000559844 DNM1LO00429 736 aa19.3■□□□□ 0.68
SNX1-208ENST00000559844 ATP1A1P05023 1023 aaKnown RBP19.3■□□□□ 0.68
SNX1-208ENST00000559844 CTAGE8P0CG41 777 aa19.3■□□□□ 0.68
SNX1-208ENST00000559844 FERP16591 822 aa19.3■□□□□ 0.68
SNX1-208ENST00000559844 ATP4AP20648 1035 aa19.3■□□□□ 0.68
SNX1-208ENST00000559844 RFX1P22670 979 aa19.3■□□□□ 0.68
SNX1-208ENST00000559844 STAT1P42224 750 aa19.3■□□□□ 0.68
SNX1-208ENST00000559844 SLC26A2P50443 739 aa19.3■□□□□ 0.68
SNX1-208ENST00000559844 ARID5AQ03989 594 aa19.3■□□□□ 0.68
SNX1-208ENST00000559844 CTAGE6Q86UF2 777 aa19.3■□□□□ 0.68
SNX1-208ENST00000559844 CTAGE4Q8IX94 777 aa19.3■□□□□ 0.68
SNX1-208ENST00000559844 TSEN34Q9BSV6 310 aaKnown RBP19.3■□□□□ 0.68
SNX1-208ENST00000559844 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.3■□□□□ 0.68
SNX1-208ENST00000559844 CCDC94Q9BW85 323 aaPredicted RBP19.3■□□□□ 0.68
SNX1-208ENST00000559844 PDLIM7Q9NR12 457 aa19.3■□□□□ 0.68
SNX1-208ENST00000559844 JRKLQ9Y4A0 524 aa19.3■□□□□ 0.68
SNX1-208ENST00000559844 MOXD2PA6NHM9 499 aa19.29■□□□□ 0.68
SNX1-208ENST00000559844 VAMP7P51809 220 aa19.29■□□□□ 0.68
SNX1-208ENST00000559844 KIAA0753Q2KHM9 967 aa19.29■□□□□ 0.68
SNX1-208ENST00000559844 IQCEQ6IPM2 695 aa19.29■□□□□ 0.68
SNX1-208ENST00000559844 VPS36Q86VN1 386 aa19.29■□□□□ 0.68
SNX1-208ENST00000559844 GPIHBP1Q8IV16 184 aa19.29■□□□□ 0.68
SNX1-208ENST00000559844 VTI1AQ96AJ9 217 aa19.29■□□□□ 0.68
SNX1-208ENST00000559844 KATNAL1Q9BW62 490 aa19.29■□□□□ 0.68
SNX1-208ENST00000559844 INTS2Q9H0H0 1204 aaKnown RBP19.29■□□□□ 0.68
SNX1-208ENST00000559844 RNPEPQ9H4A4 650 aa19.29■□□□□ 0.68
SNX1-208ENST00000559844 PCIF1Q9H4Z3 704 aa19.29■□□□□ 0.68
SNX1-208ENST00000559844 PUF60Q9UHX1 559 aaKnown RBP19.29■□□□□ 0.68
SNX1-208ENST00000559844 ATP8B3O60423 1300 aa19.29■□□□□ 0.68
SNX1-208ENST00000559844 DNAH12Q6ZR08 3092 aa19.29■□□□□ 0.68
SNX1-208ENST00000559844 OATP04181 439 aa19.28■□□□□ 0.68
SNX1-208ENST00000559844 TRIM49P0CI25 452 aa19.28■□□□□ 0.68
SNX1-208ENST00000559844 TRIM49CP0CI26 452 aa19.28■□□□□ 0.68
SNX1-208ENST00000559844 SCP2P22307 547 aa19.28■□□□□ 0.68
SNX1-208ENST00000559844 CKAP4Q07065 602 aaKnown RBP19.28■□□□□ 0.68
SNX1-208ENST00000559844 MFSD10Q14728 455 aa19.28■□□□□ 0.68
SNX1-208ENST00000559844 PLCB4Q15147 1175 aa19.28■□□□□ 0.68
SNX1-208ENST00000559844 RDH13Q8NBN7 331 aa19.28■□□□□ 0.68
SNX1-208ENST00000559844 IFT74Q96LB3 600 aa19.28■□□□□ 0.68
SNX1-208ENST00000559844 NOX5Q96PH1 765 aa19.28■□□□□ 0.68
SNX1-208ENST00000559844 CBWD1Q9BRT8 395 aa19.28■□□□□ 0.68
SNX1-208ENST00000559844 STK33Q9BYT3 514 aa19.28■□□□□ 0.68
SNX1-208ENST00000559844 TRPC6Q9Y210 931 aa19.28■□□□□ 0.68
SNX1-208ENST00000559844 DENND3A2RUS2 1198 aa19.28■□□□□ 0.68
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