RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 GLP2RO95838 553 aa13.87□□□□□ -0.19
LRRC28-214ENST00000559433 EDN1P05305 212 aa13.87□□□□□ -0.19
LRRC28-214ENST00000559433 PLA2G4BP0C869 781 aa13.87□□□□□ -0.19
LRRC28-214ENST00000559433 NPTX2P47972 431 aa13.87□□□□□ -0.19
LRRC28-214ENST00000559433 GRIN1Q05586 938 aa13.87□□□□□ -0.19
LRRC28-214ENST00000559433 RAD51AP2Q09MP3 1159 aa13.87□□□□□ -0.19
LRRC28-214ENST00000559433 MAPK7Q13164 816 aa13.87□□□□□ -0.19
LRRC28-214ENST00000559433 DDX53Q86TM3 631 aaKnown RBP13.87□□□□□ -0.19
LRRC28-214ENST00000559433 DAW1Q8N136 415 aa13.87□□□□□ -0.19
LRRC28-214ENST00000559433 VPS52Q8N1B4 723 aa13.87□□□□□ -0.19
LRRC28-214ENST00000559433 SYT2Q8N9I0 419 aaPredicted RBP13.87□□□□□ -0.19
LRRC28-214ENST00000559433 RPS6KC1Q96S38 1066 aa13.87□□□□□ -0.19
LRRC28-214ENST00000559433 POP1Q99575 1024 aaKnown RBP13.87□□□□□ -0.19
LRRC28-214ENST00000559433 KMT5AQ9NQR1 393 aa13.87□□□□□ -0.19
LRRC28-214ENST00000559433 PRKAG3Q9UGI9 489 aa13.87□□□□□ -0.19
LRRC28-214ENST00000559433 BARX2Q9UMQ3 279 aaPredicted RBP13.87□□□□□ -0.19
LRRC28-214ENST00000559433 MTMR6Q9Y217 621 aa13.87□□□□□ -0.19
LRRC28-214ENST00000559433 FAN1Q9Y2M0 1017 aa13.87□□□□□ -0.19
LRRC28-214ENST00000559433 ZMYM2Q9UBW7 1377 aa13.86□□□□□ -0.19
LRRC28-214ENST00000559433 TRIP11Q15643 1979 aa13.86□□□□□ -0.19
LRRC28-214ENST00000559433 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.86□□□□□ -0.19
LRRC28-214ENST00000559433 C2orf71A6NGG8 1288 aa13.86□□□□□ -0.19
LRRC28-214ENST00000559433 K7ERI5 159 aa13.86□□□□□ -0.19
LRRC28-214ENST00000559433 STX6O43752 255 aa13.86□□□□□ -0.19
LRRC28-214ENST00000559433 GUCY2CP25092 1073 aa13.86□□□□□ -0.19
LRRC28-214ENST00000559433 SLC12A3P55017 1021 aa13.86□□□□□ -0.19
LRRC28-214ENST00000559433 RBM10P98175 930 aaKnown RBP13.86□□□□□ -0.19
LRRC28-214ENST00000559433 SMAD4Q13485 552 aaKnown RBP13.86□□□□□ -0.19
LRRC28-214ENST00000559433 GIT2Q14161 759 aa13.86□□□□□ -0.19
LRRC28-214ENST00000559433 ATF7IP2Q5U623 682 aa13.86□□□□□ -0.19
LRRC28-214ENST00000559433 LLGL2Q6P1M3 1020 aa13.86□□□□□ -0.19
LRRC28-214ENST00000559433 FAM173BQ6P4H8 233 aa13.86□□□□□ -0.19
LRRC28-214ENST00000559433 COLGALT2Q8IYK4 626 aa13.86□□□□□ -0.19
LRRC28-214ENST00000559433 MRPL43Q8N983 215 aaKnown RBP13.86□□□□□ -0.19
LRRC28-214ENST00000559433 VN1R2Q8NFZ6 395 aa13.86□□□□□ -0.19
LRRC28-214ENST00000559433 ZBP1Q9H171 429 aa13.86□□□□□ -0.19
LRRC28-214ENST00000559433 C17orf75Q9HAS0 396 aa13.86□□□□□ -0.19
LRRC28-214ENST00000559433 MIOSQ9NXC5 875 aa13.86□□□□□ -0.19
LRRC28-214ENST00000559433 KCND2Q9NZV8 630 aa13.86□□□□□ -0.19
LRRC28-214ENST00000559433 KLK14Q9P0G3 267 aa13.86□□□□□ -0.19
LRRC28-214ENST00000559433 CLEC1BQ9P126 229 aa13.86□□□□□ -0.19
LRRC28-214ENST00000559433 SFI1A8K8P3 1242 aa13.85□□□□□ -0.19
LRRC28-214ENST00000559433 NRP1O14786 923 aa13.85□□□□□ -0.19
LRRC28-214ENST00000559433 SLC16A4O15374 487 aa13.85□□□□□ -0.19
LRRC28-214ENST00000559433 MBTPS2O43462 519 aa13.85□□□□□ -0.19
LRRC28-214ENST00000559433 HSP90AA1P07900 732 aaKnown RBP13.85□□□□□ -0.19
LRRC28-214ENST00000559433 PLCG1P19174 1290 aa13.85□□□□□ -0.19
LRRC28-214ENST00000559433 MARCKSP29966 332 aaPredicted RBP13.85□□□□□ -0.19
LRRC28-214ENST00000559433 OR1G1P47890 313 aa13.85□□□□□ -0.19
LRRC28-214ENST00000559433 CEBPZQ03701 1054 aaKnown RBP13.85□□□□□ -0.19
LRRC28-214ENST00000559433 GRIK3Q13003 919 aa13.85□□□□□ -0.19
LRRC28-214ENST00000559433 COASYQ13057 564 aa13.85□□□□□ -0.19
LRRC28-214ENST00000559433 KARSQ15046 597 aaKnown RBP13.85□□□□□ -0.19
LRRC28-214ENST00000559433 PTPAQ15257 358 aa13.85□□□□□ -0.19
LRRC28-214ENST00000559433 DCAF4L1Q3SXM0 396 aa13.85□□□□□ -0.19
LRRC28-214ENST00000559433 NT5DC1Q5TFE4 455 aa13.85□□□□□ -0.19
LRRC28-214ENST00000559433 EEF1DP3Q658K8 133 aa13.85□□□□□ -0.19
LRRC28-214ENST00000559433 APBB1IPQ7Z5R6 666 aaPredicted RBP13.85□□□□□ -0.19
LRRC28-214ENST00000559433 ADHFE1Q8IWW8 467 aa13.85□□□□□ -0.19
LRRC28-214ENST00000559433 AUTS2Q8WXX7 1259 aa13.85□□□□□ -0.19
LRRC28-214ENST00000559433 MSLNLQ96KJ4 702 aa13.85□□□□□ -0.19
LRRC28-214ENST00000559433 VN1R3Q9BXE9 311 aa13.85□□□□□ -0.19
LRRC28-214ENST00000559433 SNTG2Q9NY99 539 aa13.85□□□□□ -0.19
LRRC28-214ENST00000559433 ARHGAP28Q9P2N2 729 aa13.85□□□□□ -0.19
LRRC28-214ENST00000559433 PRG3Q9Y2Y8 225 aaPredicted RBP13.85□□□□□ -0.19
LRRC28-214ENST00000559433 C5orf42Q9H799 3197 aa13.85□□□□□ -0.19
LRRC28-214ENST00000559433 CITO14578 2027 aa13.85□□□□□ -0.19
LRRC28-214ENST00000559433 NPHP3-ACAD11A0A0J9YXS1 232 aa13.84□□□□□ -0.19
LRRC28-214ENST00000559433 RECQL4O94761 1208 aa13.84□□□□□ -0.19
LRRC28-214ENST00000559433 CTSAP10619 480 aa13.84□□□□□ -0.19
LRRC28-214ENST00000559433 ALADP13716 330 aa13.84□□□□□ -0.19
LRRC28-214ENST00000559433 PLS3P13797 630 aa13.84□□□□□ -0.19
LRRC28-214ENST00000559433 CACNB1Q02641 598 aaPredicted RBP13.84□□□□□ -0.19
LRRC28-214ENST00000559433 DSC1Q08554 894 aa13.84□□□□□ -0.19
LRRC28-214ENST00000559433 DHX8Q14562 1220 aaKnown RBP13.84□□□□□ -0.19
LRRC28-214ENST00000559433 SMAD2Q15796 467 aaKnown RBP13.84□□□□□ -0.19
LRRC28-214ENST00000559433 GPBP1Q86WP2 473 aa13.84□□□□□ -0.19
LRRC28-214ENST00000559433 SMRP1Q8NCR6 262 aa13.84□□□□□ -0.19
LRRC28-214ENST00000559433 GSTCDQ8NEC7 633 aa13.84□□□□□ -0.19
LRRC28-214ENST00000559433 RAD54LQ92698 747 aa13.84□□□□□ -0.19
LRRC28-214ENST00000559433 CASP10Q92851 521 aa13.84□□□□□ -0.19
LRRC28-214ENST00000559433 MRPL4Q9BYD3 311 aaKnown RBP13.84□□□□□ -0.19
LRRC28-214ENST00000559433 ZSCAN16Q9H4T2 348 aaPredicted RBP13.84□□□□□ -0.19
LRRC28-214ENST00000559433 TMEM134Q9H6X4 195 aa13.84□□□□□ -0.19
LRRC28-214ENST00000559433 MARCH5Q9NX47 278 aa13.84□□□□□ -0.19
LRRC28-214ENST00000559433 FBXO2Q9UK22 296 aaPredicted RBP13.84□□□□□ -0.19
LRRC28-214ENST00000559433 GDAQ9Y2T3 454 aa13.84□□□□□ -0.19
LRRC28-214ENST00000559433 RBM19Q9Y4C8 960 aaKnown RBP13.84□□□□□ -0.19
LRRC28-214ENST00000559433 CLASP2O75122 1294 aaKnown RBP13.83□□□□□ -0.2
LRRC28-214ENST00000559433 KRT18P05783 430 aaKnown RBP13.83□□□□□ -0.2
LRRC28-214ENST00000559433 HOXB8P17481 243 aaPredicted RBP13.83□□□□□ -0.2
LRRC28-214ENST00000559433 SMTNP53814 917 aa13.83□□□□□ -0.2
LRRC28-214ENST00000559433 STRN3Q13033 797 aa13.83□□□□□ -0.2
LRRC28-214ENST00000559433 KCNC3Q14003 757 aa13.83□□□□□ -0.2
LRRC28-214ENST00000559433 MCM6Q14566 821 aa13.83□□□□□ -0.2
LRRC28-214ENST00000559433 ZNF568Q3ZCX4 644 aa13.83□□□□□ -0.2
LRRC28-214ENST00000559433 TPRNQ4KMQ1 711 aa13.83□□□□□ -0.2
LRRC28-214ENST00000559433 ARSHQ5FYA8 562 aa13.83□□□□□ -0.2
LRRC28-214ENST00000559433 SPECC1Q5M775 1068 aa13.83□□□□□ -0.2
LRRC28-214ENST00000559433 CES5AQ6NT32 575 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms