RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 SPP2Q13103 211 aa17.83■□□□□ 0.44
SPG11-215ENST00000559193 RASA3Q14644 834 aa17.83■□□□□ 0.44
SPG11-215ENST00000559193 HAUS6Q7Z4H7 955 aa17.83■□□□□ 0.44
SPG11-215ENST00000559193 FAM160B2Q86V87 743 aa17.83■□□□□ 0.44
SPG11-215ENST00000559193 UHMK1Q8TAS1 419 aaKnown RBP17.83■□□□□ 0.44
SPG11-215ENST00000559193 SEMA4DQ92854 862 aa17.83■□□□□ 0.44
SPG11-215ENST00000559193 NUP85Q9BW27 656 aa17.83■□□□□ 0.44
SPG11-215ENST00000559193 MTRF1LQ9UGC7 380 aaKnown RBP17.83■□□□□ 0.44
SPG11-215ENST00000559193 PARP2Q9UGN5 583 aa17.83■□□□□ 0.44
SPG11-215ENST00000559193 GOLGB1Q14789 3259 aaKnown RBP17.82■□□□□ 0.44
SPG11-215ENST00000559193 TMEM150BA6NC51 233 aa17.82■□□□□ 0.44
SPG11-215ENST00000559193 GOLGA8IPA6NC78 632 aa17.82■□□□□ 0.44
SPG11-215ENST00000559193 GOLGA8JA6NMD2 632 aa17.82■□□□□ 0.44
SPG11-215ENST00000559193 RGS16O15492 202 aaPredicted RBP17.82■□□□□ 0.44
SPG11-215ENST00000559193 CYP1A2P05177 515 aa17.82■□□□□ 0.44
SPG11-215ENST00000559193 RARAP10276 462 aa17.82■□□□□ 0.44
SPG11-215ENST00000559193 TBC1D10BQ4KMP7 808 aaPredicted RBP17.82■□□□□ 0.44
SPG11-215ENST00000559193 PPM1KQ8N3J5 372 aa17.82■□□□□ 0.44
SPG11-215ENST00000559193 EPS8L3Q8TE67 593 aaKnown RBP17.82■□□□□ 0.44
SPG11-215ENST00000559193 SHC3Q92529 594 aa17.82■□□□□ 0.44
SPG11-215ENST00000559193 CCDC114Q96M63 670 aa17.82■□□□□ 0.44
SPG11-215ENST00000559193 AGBL1Q96MI9 1066 aa17.82■□□□□ 0.44
SPG11-215ENST00000559193 GLIS2Q9BZE0 524 aaPredicted RBP17.82■□□□□ 0.44
SPG11-215ENST00000559193 DEFB129Q9H1M3 183 aa17.82■□□□□ 0.44
SPG11-215ENST00000559193 PMM2O15305 246 aa17.82■□□□□ 0.44
SPG11-215ENST00000559193 MAP2K1Q02750 393 aaPredicted RBP17.82■□□□□ 0.44
SPG11-215ENST00000559193 ADCY2Q08462 1091 aa17.82■□□□□ 0.44
SPG11-215ENST00000559193 LACTB2Q53H82 288 aaPredicted RBP17.82■□□□□ 0.44
SPG11-215ENST00000559193 STYK1Q6J9G0 422 aa17.82■□□□□ 0.44
SPG11-215ENST00000559193 CDAN1Q8IWY9 1227 aa17.82■□□□□ 0.44
SPG11-215ENST00000559193 IPO4Q8TEX9 1081 aaKnown RBP17.82■□□□□ 0.44
SPG11-215ENST00000559193 CCT6BQ92526 530 aa17.82■□□□□ 0.44
SPG11-215ENST00000559193 TMEM109Q9BVC6 243 aa17.82■□□□□ 0.44
SPG11-215ENST00000559193 GPRC5CQ9NQ84 441 aa17.82■□□□□ 0.44
SPG11-215ENST00000559193 KLC4Q9NSK0 619 aa17.82■□□□□ 0.44
SPG11-215ENST00000559193 TMOD2Q9NZR1 351 aa17.82■□□□□ 0.44
SPG11-215ENST00000559193 PTPN22Q9Y2R2 807 aa17.82■□□□□ 0.44
SPG11-215ENST00000559193 SPDYE2BA6NHP3 402 aa17.81■□□□□ 0.44
SPG11-215ENST00000559193 SLC16A4O15374 487 aa17.81■□□□□ 0.44
SPG11-215ENST00000559193 RIPK2O43353 540 aa17.81■□□□□ 0.44
SPG11-215ENST00000559193 SPOPO43791 374 aa17.81■□□□□ 0.44
SPG11-215ENST00000559193 AGTP01019 485 aa17.81■□□□□ 0.44
SPG11-215ENST00000559193 SPDYE6P0CI01 402 aa17.81■□□□□ 0.44
SPG11-215ENST00000559193 CBWD2Q8IUF1 395 aa17.81■□□□□ 0.44
SPG11-215ENST00000559193 CCDC105Q8IYK2 499 aa17.81■□□□□ 0.44
SPG11-215ENST00000559193 ART4Q93070 314 aa17.81■□□□□ 0.44
SPG11-215ENST00000559193 ZNF653Q96CK0 615 aa17.81■□□□□ 0.44
SPG11-215ENST00000559193 ST6GALNAC4Q9H4F1 302 aa17.81■□□□□ 0.44
SPG11-215ENST00000559193 AGO4Q9HCK5 861 aaKnown RBP17.81■□□□□ 0.44
SPG11-215ENST00000559193 FEM1BQ9UK73 627 aa17.81■□□□□ 0.44
SPG11-215ENST00000559193 CNTNAP1P78357 1384 aa17.81■□□□□ 0.44
SPG11-215ENST00000559193 NFIBO00712 420 aa17.81■□□□□ 0.44
SPG11-215ENST00000559193 KCNJ1P48048 391 aa17.81■□□□□ 0.44
SPG11-215ENST00000559193 C6orf118Q5T5N4 469 aa17.81■□□□□ 0.44
SPG11-215ENST00000559193 GTF3C4Q9UKN8 822 aa17.81■□□□□ 0.44
SPG11-215ENST00000559193 MTUS1Q9ULD2 1270 aa17.81■□□□□ 0.44
SPG11-215ENST00000559193 CCPG1Q9ULG6 757 aa17.81■□□□□ 0.44
SPG11-215ENST00000559193 ZNF536O15090 1300 aa17.8■□□□□ 0.44
SPG11-215ENST00000559193 H0YIN7 160 aa17.8■□□□□ 0.44
SPG11-215ENST00000559193 SCTRP47872 440 aa17.8■□□□□ 0.44
SPG11-215ENST00000559193 QARSP47897 775 aaKnown RBP17.8■□□□□ 0.44
SPG11-215ENST00000559193 PEX3P56589 373 aa17.8■□□□□ 0.44
SPG11-215ENST00000559193 UGCGQ16739 394 aa17.8■□□□□ 0.44
SPG11-215ENST00000559193 TKFCQ3LXA3 575 aa17.8■□□□□ 0.44
SPG11-215ENST00000559193 TNFAIP8L3Q5GJ75 292 aa17.8■□□□□ 0.44
SPG11-215ENST00000559193 KRT27Q7Z3Y8 459 aa17.8■□□□□ 0.44
SPG11-215ENST00000559193 C12orf50Q8NA57 414 aaPredicted RBP17.8■□□□□ 0.44
SPG11-215ENST00000559193 FAM151AQ8WW52 585 aa17.8■□□□□ 0.44
SPG11-215ENST00000559193 JPH2Q9BR39 696 aaPredicted RBP17.8■□□□□ 0.44
SPG11-215ENST00000559193 RARGP13631 454 aa17.8■□□□□ 0.44
SPG11-215ENST00000559193 CYP11B1P15538 503 aa17.8■□□□□ 0.44
SPG11-215ENST00000559193 ADSSP30520 456 aa17.8■□□□□ 0.44
SPG11-215ENST00000559193 CHRNA5P30532 468 aa17.8■□□□□ 0.44
SPG11-215ENST00000559193 YWHABP31946 246 aaKnown RBP17.8■□□□□ 0.44
SPG11-215ENST00000559193 SLCO1A2P46721 670 aa17.8■□□□□ 0.44
SPG11-215ENST00000559193 NCKAP1LP55160 1127 aa17.8■□□□□ 0.44
SPG11-215ENST00000559193 SLMAPQ14BN4 828 aa17.8■□□□□ 0.44
SPG11-215ENST00000559193 NSMFQ6X4W1 530 aa17.8■□□□□ 0.44
SPG11-215ENST00000559193 NIPA1Q7RTP0 329 aa17.8■□□□□ 0.44
SPG11-215ENST00000559193 HELQQ8TDG4 1101 aa17.8■□□□□ 0.44
SPG11-215ENST00000559193 ZNF70Q9UC06 446 aaPredicted RBP17.8■□□□□ 0.44
SPG11-215ENST00000559193 UBIAD1Q9Y5Z9 338 aa17.8■□□□□ 0.44
SPG11-215ENST00000559193 ASTN2O75129 1339 aaPredicted RBP17.79■□□□□ 0.44
SPG11-215ENST00000559193 PASKQ96RG2 1323 aa17.79■□□□□ 0.44
SPG11-215ENST00000559193 LYPLA2O95372 231 aa17.79■□□□□ 0.44
SPG11-215ENST00000559193 ICAM1P05362 532 aa17.79■□□□□ 0.44
SPG11-215ENST00000559193 MFAP3P55082 362 aa17.79■□□□□ 0.44
SPG11-215ENST00000559193 MCCD1P59942 119 aaPredicted RBP17.79■□□□□ 0.44
SPG11-215ENST00000559193 TNIP1Q15025 636 aa17.79■□□□□ 0.44
SPG11-215ENST00000559193 SNRNP35Q16560 246 aaKnown RBP17.79■□□□□ 0.44
SPG11-215ENST00000559193 RNF207Q6ZRF8 634 aa17.79■□□□□ 0.44
SPG11-215ENST00000559193 CYFIP1Q7L576 1253 aa17.79■□□□□ 0.44
SPG11-215ENST00000559193 PSPC1Q8WXF1 523 aaKnown RBP17.79■□□□□ 0.44
SPG11-215ENST00000559193 CLEC4DQ8WXI8 215 aa17.79■□□□□ 0.44
SPG11-215ENST00000559193 RUNDC3BQ96NL0 473 aa17.79■□□□□ 0.44
SPG11-215ENST00000559193 MTFR1LQ9H019 292 aa17.79■□□□□ 0.44
SPG11-215ENST00000559193 CAP2P40123 477 aa17.79■□□□□ 0.44
SPG11-215ENST00000559193 PTGER2P43116 358 aa17.79■□□□□ 0.44
SPG11-215ENST00000559193 RWDD2BP57060 319 aa17.79■□□□□ 0.44
SPG11-215ENST00000559193 SNRPFP62306 86 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms