RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 CDK5RAP3Q96JB5 506 aa19.4■□□□□ 0.7
SMAD3-210ENST00000559092 PNMA5Q96PV4 448 aa19.4■□□□□ 0.7
SMAD3-210ENST00000559092 NTPCRQ9BSD7 190 aaKnown RBP19.4■□□□□ 0.7
SMAD3-210ENST00000559092 RUSC1Q9BVN2 902 aa19.4■□□□□ 0.7
SMAD3-210ENST00000559092 TMEM134Q9H6X4 195 aa19.4■□□□□ 0.7
SMAD3-210ENST00000559092 POLD4Q9HCU8 107 aa19.4■□□□□ 0.7
SMAD3-210ENST00000559092 MIOSQ9NXC5 875 aa19.4■□□□□ 0.7
SMAD3-210ENST00000559092 PARP2Q9UGN5 583 aa19.4■□□□□ 0.7
SMAD3-210ENST00000559092 TCF20Q9UGU0 1960 aaKnown RBP19.39■□□□□ 0.7
SMAD3-210ENST00000559092 VPS37CA5D8V6 355 aaPredicted RBP19.39■□□□□ 0.69
SMAD3-210ENST00000559092 TTLL13PA6NNM8 815 aa19.39■□□□□ 0.69
SMAD3-210ENST00000559092 HIP1RO75146 1068 aa19.39■□□□□ 0.69
SMAD3-210ENST00000559092 LONP1P36776 959 aaKnown RBP19.39■□□□□ 0.69
SMAD3-210ENST00000559092 UBA7P41226 1012 aa19.39■□□□□ 0.69
SMAD3-210ENST00000559092 PEX3P56589 373 aa19.39■□□□□ 0.69
SMAD3-210ENST00000559092 RBM10P98175 930 aaKnown RBP19.39■□□□□ 0.69
SMAD3-210ENST00000559092 DCAF4L1Q3SXM0 396 aa19.39■□□□□ 0.69
SMAD3-210ENST00000559092 KIFC3Q9BVG8 833 aa19.39■□□□□ 0.69
SMAD3-210ENST00000559092 COLEC11Q9BWP8 271 aa19.39■□□□□ 0.69
SMAD3-210ENST00000559092 VN1R3Q9BXE9 311 aa19.39■□□□□ 0.69
SMAD3-210ENST00000559092 SSX2IPQ9Y2D8 614 aa19.39■□□□□ 0.69
SMAD3-210ENST00000559092 USP15Q9Y4E8 981 aaPredicted RBP19.39■□□□□ 0.69
SMAD3-210ENST00000559092 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.38■□□□□ 0.69
SMAD3-210ENST00000559092 CCDC169A6NNP5 214 aa19.38■□□□□ 0.69
SMAD3-210ENST00000559092 LIG1P18858 919 aa19.38■□□□□ 0.69
SMAD3-210ENST00000559092 SYT1P21579 422 aa19.38■□□□□ 0.69
SMAD3-210ENST00000559092 OR1G1P47890 313 aa19.38■□□□□ 0.69
SMAD3-210ENST00000559092 GRIK3Q13003 919 aa19.38■□□□□ 0.69
SMAD3-210ENST00000559092 SF3A1Q15459 793 aaKnown RBP19.38■□□□□ 0.69
SMAD3-210ENST00000559092 TPRNQ4KMQ1 711 aa19.38■□□□□ 0.69
SMAD3-210ENST00000559092 TMEM119Q4V9L6 283 aa19.38■□□□□ 0.69
SMAD3-210ENST00000559092 CABP7Q86V35 215 aa19.38■□□□□ 0.69
SMAD3-210ENST00000559092 PPFIBP1Q86W92 1011 aa19.38■□□□□ 0.69
SMAD3-210ENST00000559092 SPIRE2Q8WWL2 714 aa19.38■□□□□ 0.69
SMAD3-210ENST00000559092 SUSD6Q92537 303 aa19.38■□□□□ 0.69
SMAD3-210ENST00000559092 RPS6KC1Q96S38 1066 aa19.38■□□□□ 0.69
SMAD3-210ENST00000559092 S1PR5Q9H228 398 aa19.38■□□□□ 0.69
SMAD3-210ENST00000559092 KMT5AQ9NQR1 393 aa19.38■□□□□ 0.69
SMAD3-210ENST00000559092 ARHGAP28Q9P2N2 729 aa19.38■□□□□ 0.69
SMAD3-210ENST00000559092 HCFC2Q9Y5Z7 792 aa19.38■□□□□ 0.69
SMAD3-210ENST00000559092 PLXNA4Q9HCM2 1894 aa19.37■□□□□ 0.69
SMAD3-210ENST00000559092 K7ELQ4 463 aaPredicted RBP19.37■□□□□ 0.69
SMAD3-210ENST00000559092 LILRB3O75022 631 aa19.37■□□□□ 0.69
SMAD3-210ENST00000559092 EFEMP2O95967 443 aa19.37■□□□□ 0.69
SMAD3-210ENST00000559092 SOD2P04179 222 aa19.37■□□□□ 0.69
SMAD3-210ENST00000559092 PLA2G4BP0C869 781 aa19.37■□□□□ 0.69
SMAD3-210ENST00000559092 ALADP13716 330 aa19.37■□□□□ 0.69
SMAD3-210ENST00000559092 CA8P35219 290 aa19.37■□□□□ 0.69
SMAD3-210ENST00000559092 SLC12A3P55017 1021 aa19.37■□□□□ 0.69
SMAD3-210ENST00000559092 MAPK7Q13164 816 aa19.37■□□□□ 0.69
SMAD3-210ENST00000559092 PTPN14Q15678 1187 aa19.37■□□□□ 0.69
SMAD3-210ENST00000559092 NT5DC1Q5TFE4 455 aa19.37■□□□□ 0.69
SMAD3-210ENST00000559092 ATF7IP2Q5U623 682 aa19.37■□□□□ 0.69
SMAD3-210ENST00000559092 LLGL2Q6P1M3 1020 aa19.37■□□□□ 0.69
SMAD3-210ENST00000559092 SYCE2Q6PIF2 218 aa19.37■□□□□ 0.69
SMAD3-210ENST00000559092 AUTS2Q8WXX7 1259 aa19.37■□□□□ 0.69
SMAD3-210ENST00000559092 CALML4Q96GE6 196 aa19.37■□□□□ 0.69
SMAD3-210ENST00000559092 EMILIN2Q9BXX0 1053 aa19.37■□□□□ 0.69
SMAD3-210ENST00000559092 EPHX3Q9H6B9 360 aa19.37■□□□□ 0.69
SMAD3-210ENST00000559092 MRPL17Q9NRX2 175 aaKnown RBP19.37■□□□□ 0.69
SMAD3-210ENST00000559092 DZANK1Q9NVP4 752 aa19.37■□□□□ 0.69
SMAD3-210ENST00000559092 MARCH5Q9NX47 278 aa19.37■□□□□ 0.69
SMAD3-210ENST00000559092 KLK14Q9P0G3 267 aa19.37■□□□□ 0.69
SMAD3-210ENST00000559092 TNFSF13BQ9Y275 285 aa19.37■□□□□ 0.69
SMAD3-210ENST00000559092 PRG3Q9Y2Y8 225 aaPredicted RBP19.37■□□□□ 0.69
SMAD3-210ENST00000559092 SSBP05455 408 aaKnown RBP eCLIP19.36■□□□□ 0.69
SMAD3-210ENST00000559092 PLS3P13797 630 aa19.36■□□□□ 0.69
SMAD3-210ENST00000559092 SMTNP53814 917 aa19.36■□□□□ 0.69
SMAD3-210ENST00000559092 EEF1DP3Q658K8 133 aa19.36■□□□□ 0.69
SMAD3-210ENST00000559092 GPR65Q8IYL9 337 aa19.36■□□□□ 0.69
SMAD3-210ENST00000559092 RNF168Q8IYW5 571 aaPredicted RBP19.36■□□□□ 0.69
SMAD3-210ENST00000559092 SNX21Q969T3 373 aa19.36■□□□□ 0.69
SMAD3-210ENST00000559092 ACO2Q99798 780 aaKnown RBP19.36■□□□□ 0.69
SMAD3-210ENST00000559092 HERC2P3Q9BVR0 1158 aa19.36■□□□□ 0.69
SMAD3-210ENST00000559092 PHF7Q9BWX1 381 aaPredicted RBP19.36■□□□□ 0.69
SMAD3-210ENST00000559092 SNTG2Q9NY99 539 aa19.36■□□□□ 0.69
SMAD3-210ENST00000559092 RECQL4O94761 1208 aa19.35■□□□□ 0.69
SMAD3-210ENST00000559092 EDN1P05305 212 aa19.35■□□□□ 0.69
SMAD3-210ENST00000559092 THP07101 528 aa19.35■□□□□ 0.69
SMAD3-210ENST00000559092 SCP2P22307 547 aa19.35■□□□□ 0.69
SMAD3-210ENST00000559092 ITIH3Q06033 890 aa19.35■□□□□ 0.69
SMAD3-210ENST00000559092 SLC22A17Q8WUG5 538 aa19.35■□□□□ 0.69
SMAD3-210ENST00000559092 KHSRPQ92945 711 aaKnown RBP eCLIP19.35■□□□□ 0.692e-8■■■■■ 28.6
SMAD3-210ENST00000559092 PLIN2Q99541 437 aa19.35■□□□□ 0.69
SMAD3-210ENST00000559092 MRPL4Q9BYD3 311 aaKnown RBP19.35■□□□□ 0.69
SMAD3-210ENST00000559092 ADAM7Q9H2U9 754 aa19.35■□□□□ 0.69
SMAD3-210ENST00000559092 PTPRHQ9HD43 1115 aa19.35■□□□□ 0.69
SMAD3-210ENST00000559092 USP20Q9Y2K6 914 aa19.35■□□□□ 0.69
SMAD3-210ENST00000559092 ATG2AQ2TAZ0 1938 aa19.35■□□□□ 0.69
SMAD3-210ENST00000559092 LOC730098B7Z3J9 87 aa19.34■□□□□ 0.69
SMAD3-210ENST00000559092 C1RP00736 705 aa19.34■□□□□ 0.69
SMAD3-210ENST00000559092 URODP06132 367 aa19.34■□□□□ 0.69
SMAD3-210ENST00000559092 RESTQ13127 1097 aa19.34■□□□□ 0.69
SMAD3-210ENST00000559092 TUSC3Q13454 348 aa19.34■□□□□ 0.69
SMAD3-210ENST00000559092 CBX2Q14781 532 aaPredicted RBP19.34■□□□□ 0.69
SMAD3-210ENST00000559092 ARSHQ5FYA8 562 aa19.34■□□□□ 0.69
SMAD3-210ENST00000559092 KIAA0319Q5VV43 1072 aa19.34■□□□□ 0.69
SMAD3-210ENST00000559092 CES5AQ6NT32 575 aa19.34■□□□□ 0.69
SMAD3-210ENST00000559092 KCNN1Q92952 543 aa19.34■□□□□ 0.69
SMAD3-210ENST00000559092 NECTIN4Q96NY8 510 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms