RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 MARCH5Q9NX47 278 aa12.5□□□□□ -0.41
CHRNA3-205ENST00000559080 PIN4Q9Y237 131 aaKnown RBP12.5□□□□□ -0.41
CHRNA3-205ENST00000559080 SIT1Q9Y3P8 196 aa12.5□□□□□ -0.41
CHRNA3-205ENST00000559080 PPME1Q9Y570 386 aa12.5□□□□□ -0.41
CHRNA3-205ENST00000559080 TRIP11Q15643 1979 aa12.49□□□□□ -0.41
CHRNA3-205ENST00000559080 ANHXE9PGG2 379 aa12.49□□□□□ -0.41
CHRNA3-205ENST00000559080 NRP1O14786 923 aa12.49□□□□□ -0.41
CHRNA3-205ENST00000559080 TEX28O15482 410 aa12.49□□□□□ -0.41
CHRNA3-205ENST00000559080 LRRN2O75325 713 aa12.49□□□□□ -0.41
CHRNA3-205ENST00000559080 SOD2P04179 222 aa12.49□□□□□ -0.41
CHRNA3-205ENST00000559080 SFPQP23246 707 aaKnown RBP eCLIP12.49□□□□□ -0.41
CHRNA3-205ENST00000559080 CDC42EP1Q00587 391 aa12.49□□□□□ -0.41
CHRNA3-205ENST00000559080 RABEP1Q15276 862 aa12.49□□□□□ -0.41
CHRNA3-205ENST00000559080 RSPO4Q2I0M5 234 aaPredicted RBP12.49□□□□□ -0.41
CHRNA3-205ENST00000559080 CYP26C1Q6V0L0 522 aa12.49□□□□□ -0.41
CHRNA3-205ENST00000559080 ANO5Q75V66 913 aa12.49□□□□□ -0.41
CHRNA3-205ENST00000559080 TAS1R1Q7RTX1 841 aa12.49□□□□□ -0.41
CHRNA3-205ENST00000559080 EXOC8Q8IYI6 725 aa12.49□□□□□ -0.41
CHRNA3-205ENST00000559080 ZNF707Q96C28 371 aaPredicted RBP12.49□□□□□ -0.41
CHRNA3-205ENST00000559080 CEP170P1Q96L14 293 aa12.49□□□□□ -0.41
CHRNA3-205ENST00000559080 CCDC43Q96MW1 224 aaKnown RBP12.49□□□□□ -0.41
CHRNA3-205ENST00000559080 RPS6KC1Q96S38 1066 aa12.49□□□□□ -0.41
CHRNA3-205ENST00000559080 KIF2CQ99661 725 aa12.49□□□□□ -0.41
CHRNA3-205ENST00000559080 HINFPQ9BQA5 517 aa12.49□□□□□ -0.41
CHRNA3-205ENST00000559080 TMEM175Q9BSA9 504 aa12.49□□□□□ -0.41
CHRNA3-205ENST00000559080 ARHGEF3Q9NR81 526 aa12.49□□□□□ -0.41
CHRNA3-205ENST00000559080 STK39Q9UEW8 545 aa12.49□□□□□ -0.41
CHRNA3-205ENST00000559080 C2CD2LO14523 706 aa12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 MAFO75444 373 aaPredicted RBP12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 ALDH2P05091 517 aa12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 MYBP10242 640 aa12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 LAMP2P13473 410 aa12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 RFC5P40937 340 aa12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 RAB27AP51159 221 aa12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 STARD6P59095 220 aa12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 CYP4A11Q02928 519 aa12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 SPIRE1Q08AE8 756 aa12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 KIAA0319Q5VV43 1072 aa12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 OTUD6AQ7L8S5 288 aa12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 MRPL10Q7Z7H8 261 aaKnown RBP12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 ZNF410Q86VK4 478 aa12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 RHPN2Q8IUC4 686 aa12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 KSR1Q8IVT5 923 aa12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 C4orf19Q8IY42 314 aa12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 PJA1Q8NG27 643 aa12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 STAMQ92783 540 aa12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 DYDC2Q96IM9 177 aa12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 HERC2P3Q9BVR0 1158 aa12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 FOXQ1Q9C009 403 aa12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 INO80BQ9C086 356 aaPredicted RBP12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 ZSWIM4Q9H7M6 989 aa12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 TTC12Q9H892 705 aaPredicted RBP12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 IFT122Q9HBG6 1241 aa12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 RXFP1Q9HBX9 757 aa12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 SLC2A4RGQ9NR83 387 aa12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 AGPAT5Q9NUQ2 364 aa12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 SUCLA2Q9P2R7 463 aaPredicted RBP12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 PCDHA12Q9UN75 941 aa12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 FAN1Q9Y2M0 1017 aa12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 PCDHB2Q9Y5E7 798 aa12.48□□□□□ -0.41
CHRNA3-205ENST00000559080 GAS2O43903 313 aaKnown RBP12.47□□□□□ -0.41
CHRNA3-205ENST00000559080 ADH1AP07327 375 aa12.47□□□□□ -0.41
CHRNA3-205ENST00000559080 ATP2B1P20020 1258 aa12.47□□□□□ -0.41
CHRNA3-205ENST00000559080 RFX1P22670 979 aa12.47□□□□□ -0.41
CHRNA3-205ENST00000559080 YWHABP31946 246 aaKnown RBP12.47□□□□□ -0.41
CHRNA3-205ENST00000559080 MCM7P33993 719 aa12.47□□□□□ -0.41
CHRNA3-205ENST00000559080 TXKP42681 527 aa12.47□□□□□ -0.41
CHRNA3-205ENST00000559080 NPEPPSP55786 919 aa12.47□□□□□ -0.41
CHRNA3-205ENST00000559080 HTR4Q13639 388 aa12.47□□□□□ -0.41
CHRNA3-205ENST00000559080 CTTNQ14247 550 aaKnown RBP12.47□□□□□ -0.41
CHRNA3-205ENST00000559080 UBXN11Q5T124 520 aa12.47□□□□□ -0.41
CHRNA3-205ENST00000559080 DCLRE1AQ6PJP8 1040 aa12.47□□□□□ -0.41
CHRNA3-205ENST00000559080 COLGALT2Q8IYK4 626 aa12.47□□□□□ -0.41
CHRNA3-205ENST00000559080 ST13P5Q8NFI4 369 aaPredicted RBP12.47□□□□□ -0.41
CHRNA3-205ENST00000559080 PSPC1Q8WXF1 523 aaKnown RBP12.47□□□□□ -0.41
CHRNA3-205ENST00000559080 SMG7Q92540 1137 aaKnown RBP12.47□□□□□ -0.41
CHRNA3-205ENST00000559080 PGBD4Q96DM1 585 aa12.47□□□□□ -0.41
CHRNA3-205ENST00000559080 NLRP4Q96MN2 994 aa12.47□□□□□ -0.41
CHRNA3-205ENST00000559080 RPP25Q9BUL9 199 aaKnown RBP12.47□□□□□ -0.41
CHRNA3-205ENST00000559080 NT5C3AQ9H0P0 336 aa12.47□□□□□ -0.41
CHRNA3-205ENST00000559080 FOXP1Q9H334 677 aaPredicted RBP12.47□□□□□ -0.41
CHRNA3-205ENST00000559080 RSAD1Q9HA92 442 aa12.47□□□□□ -0.41
CHRNA3-205ENST00000559080 RGL1Q9NZL6 768 aa12.47□□□□□ -0.41
CHRNA3-205ENST00000559080 WRAP73Q9P2S5 460 aaPredicted RBP12.47□□□□□ -0.41
CHRNA3-205ENST00000559080 KIF3AQ9Y496 699 aa12.47□□□□□ -0.41
CHRNA3-205ENST00000559080 GLUD1P00367 558 aa12.46□□□□□ -0.41
CHRNA3-205ENST00000559080 POMCP01189 267 aa12.46□□□□□ -0.41
CHRNA3-205ENST00000559080 URODP06132 367 aa12.46□□□□□ -0.41
CHRNA3-205ENST00000559080 SPATA31D3P0C874 917 aa12.46□□□□□ -0.41
CHRNA3-205ENST00000559080 HOXA11P31270 313 aaPredicted RBP12.46□□□□□ -0.41
CHRNA3-205ENST00000559080 ORC2Q13416 577 aaPredicted RBP12.46□□□□□ -0.41
CHRNA3-205ENST00000559080 EMC2Q15006 297 aa12.46□□□□□ -0.41
CHRNA3-205ENST00000559080 XKR9Q5GH70 373 aa12.46□□□□□ -0.41
CHRNA3-205ENST00000559080 SPATA31D4Q6ZUB0 917 aa12.46□□□□□ -0.41
CHRNA3-205ENST00000559080 CATSPER4Q7RTX7 472 aa12.46□□□□□ -0.41
CHRNA3-205ENST00000559080 TPH2Q8IWU9 490 aa12.46□□□□□ -0.41
CHRNA3-205ENST00000559080 FBXO18Q8NFZ0 1043 aa12.46□□□□□ -0.41
CHRNA3-205ENST00000559080 URGCPQ8TCY9 931 aa12.46□□□□□ -0.41
CHRNA3-205ENST00000559080 HDAC7Q8WUI4 952 aa12.46□□□□□ -0.41
CHRNA3-205ENST00000559080 TCP11Q8WWU5 503 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms