RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 GAP43P17677 238 aa12.56□□□□□ -0.4
SNX1-204ENST00000559061 AKAP5P24588 427 aa12.56□□□□□ -0.4
SNX1-204ENST00000559061 ADSSP30520 456 aa12.56□□□□□ -0.4
SNX1-204ENST00000559061 RAB27AP51159 221 aa12.56□□□□□ -0.4
SNX1-204ENST00000559061 ERVK-21P61565 698 aa12.56□□□□□ -0.4
SNX1-204ENST00000559061 FAM160A1Q05DH4 1040 aa12.56□□□□□ -0.4
SNX1-204ENST00000559061 ADGRE1Q14246 886 aa12.56□□□□□ -0.4
SNX1-204ENST00000559061 PPP2R2DQ66LE6 453 aa12.56□□□□□ -0.4
SNX1-204ENST00000559061 TMEM130Q8N3G9 435 aa12.56□□□□□ -0.4
SNX1-204ENST00000559061 RNF169Q8NCN4 708 aa12.56□□□□□ -0.4
SNX1-204ENST00000559061 KIAA0895Q8NCT3 520 aa12.56□□□□□ -0.4
SNX1-204ENST00000559061 ERCC4Q92889 916 aaPredicted RBP12.56□□□□□ -0.4
SNX1-204ENST00000559061 ZFP42Q96MM3 310 aa12.56□□□□□ -0.4
SNX1-204ENST00000559061 ZBED2Q9BTP6 218 aa12.56□□□□□ -0.4
SNX1-204ENST00000559061 MRPL4Q9BYD3 311 aaKnown RBP12.56□□□□□ -0.4
SNX1-204ENST00000559061 TMEM117Q9H0C3 514 aa12.56□□□□□ -0.4
SNX1-204ENST00000559061 MTMR10Q9NXD2 777 aa12.56□□□□□ -0.4
SNX1-204ENST00000559061 SEL1LQ9UBV2 794 aa12.56□□□□□ -0.4
SNX1-204ENST00000559061 USP25Q9UHP3 1055 aa12.56□□□□□ -0.4
SNX1-204ENST00000559061 MSRAQ9UJ68 235 aa12.56□□□□□ -0.4
SNX1-204ENST00000559061 PTGESO14684 152 aa12.55□□□□□ -0.4
SNX1-204ENST00000559061 PRPF6O94906 941 aaKnown RBP12.55□□□□□ -0.4
SNX1-204ENST00000559061 PBX3P40426 434 aa12.55□□□□□ -0.4
SNX1-204ENST00000559061 SMTNP53814 917 aa12.55□□□□□ -0.4
SNX1-204ENST00000559061 MCL1Q07820 350 aa12.55□□□□□ -0.4
SNX1-204ENST00000559061 NAB2Q15742 525 aa12.55□□□□□ -0.4
SNX1-204ENST00000559061 KMT5BQ4FZB7 885 aa12.55□□□□□ -0.4
SNX1-204ENST00000559061 SEZ6Q53EL9 994 aa12.55□□□□□ -0.4
SNX1-204ENST00000559061 HERC4Q5GLZ8 1057 aaPredicted RBP12.55□□□□□ -0.4
SNX1-204ENST00000559061 L1TD1Q5T7N2 865 aaKnown RBP12.55□□□□□ -0.4
SNX1-204ENST00000559061 MPZL3Q6UWV2 235 aa12.55□□□□□ -0.4
SNX1-204ENST00000559061 ZPBP2Q6X784 338 aa12.55□□□□□ -0.4
SNX1-204ENST00000559061 TMEM173Q86WV6 379 aaPredicted RBP12.55□□□□□ -0.4
SNX1-204ENST00000559061 CEP57L1Q8IYX8 460 aa12.55□□□□□ -0.4
SNX1-204ENST00000559061 BCL7CQ8WUZ0 217 aaPredicted RBP12.55□□□□□ -0.4
SNX1-204ENST00000559061 SCFD1Q8WVM8 642 aa12.55□□□□□ -0.4
SNX1-204ENST00000559061 GAD1Q99259 594 aa12.55□□□□□ -0.4
SNX1-204ENST00000559061 PYM1Q9BRP8 204 aaKnown RBP12.55□□□□□ -0.4
SNX1-204ENST00000559061 APOL6Q9BWW8 343 aa12.55□□□□□ -0.4
SNX1-204ENST00000559061 MRPL44Q9H9J2 332 aaKnown RBP12.55□□□□□ -0.4
SNX1-204ENST00000559061 LMBRD1Q9NUN5 540 aa12.55□□□□□ -0.4
SNX1-204ENST00000559061 TYW1Q9NV66 732 aaKnown RBP12.55□□□□□ -0.4
SNX1-204ENST00000559061 TBC1D13Q9NVG8 400 aa12.55□□□□□ -0.4
SNX1-204ENST00000559061 SNTG2Q9NY99 539 aa12.55□□□□□ -0.4
SNX1-204ENST00000559061 CACNG4Q9UBN1 327 aa12.55□□□□□ -0.4
SNX1-204ENST00000559061 LRFN2Q9ULH4 789 aa12.55□□□□□ -0.4
SNX1-204ENST00000559061 STYXL1Q9Y6J8 313 aa12.55□□□□□ -0.4
SNX1-204ENST00000559061 COL6A3P12111 3177 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 PVALEFA0A1B0GWK0 134 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 ARL5CA6NH57 179 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 C5orf67F2Z3F1 127 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 PRPF40AO75400 957 aaKnown RBP12.54□□□□□ -0.4
SNX1-204ENST00000559061 TOM1L1O75674 476 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 RECQL4O94761 1208 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 DDHD2O94830 711 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 IGFBP6P24592 240 aaPredicted RBP12.54□□□□□ -0.4
SNX1-204ENST00000559061 MLH1P40692 756 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 TNFSF9P41273 254 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 WNT7BP56706 349 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 STK4Q13043 487 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 PNOCQ13519 176 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 CAMK1Q14012 370 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 BTG3Q14201 252 aaPredicted RBP12.54□□□□□ -0.4
SNX1-204ENST00000559061 ZNF568Q3ZCX4 644 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 EPC2Q52LR7 807 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 FAM26FQ5R3K3 315 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 ZNF697Q5TEC3 545 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 ALKAL1Q6UXT8 129 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 ZBTB33Q86T24 672 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 ZNF280BQ86YH2 543 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 CCDC65Q8IXS2 484 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 DEFB123Q8N688 67 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 CNNM3Q8NE01 707 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 SPATA20Q8TB22 786 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 GDPD5Q8WTR4 605 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 PRDM12Q9H4Q4 367 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 RSAD1Q9HA92 442 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 SLC28A3Q9HAS3 691 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 KLK14Q9P0G3 267 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 DNAJB4Q9UDY4 337 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 MTUS1Q9ULD2 1270 aa12.54□□□□□ -0.4
SNX1-204ENST00000559061 MYO9BQ13459 2157 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 A0A0B4J269 797 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 F8W810 466 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 TGFB1I1O43294 461 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 GCNT3O95395 438 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 RPN1P04843 607 aaKnown RBP12.53□□□□□ -0.4
SNX1-204ENST00000559061 MCF2P10911 925 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 SKIP12755 728 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 ITGA4P13612 1032 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 DNAJB1P25685 340 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 GRM5P41594 1212 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 SCNN1GP51170 649 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 UBE2HP62256 183 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 AMPD3Q01432 767 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 DSC1Q08554 894 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 NOLC1Q14978 699 aaKnown RBP eCLIP12.53□□□□□ -0.4
SNX1-204ENST00000559061 POSTNQ15063 836 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 BMT2Q1RMZ1 405 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 DCAF4L1Q3SXM0 396 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms