RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, human

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABPB1-208	ENST00000558970	ZSWIM2	Q8NEG5	633 aa		13.6	□□□□□ -0.23
GABPB1-208	ENST00000558970	ZNF507	Q8TCN5	953 aa		13.6	□□□□□ -0.23
GABPB1-208	ENST00000558970	POMGNT1	Q8WZA1	660 aa		13.6	□□□□□ -0.23
GABPB1-208	ENST00000558970	HERVK_113	Q902F9	699 aa		13.6	□□□□□ -0.23
GABPB1-208	ENST00000558970	SAAL1	Q96ER3	474 aa		13.6	□□□□□ -0.23
GABPB1-208	ENST00000558970	LRCH3	Q96II8	777 aa		13.6	□□□□□ -0.23
GABPB1-208	ENST00000558970	MSTO1	Q9BUK6	570 aa		13.6	□□□□□ -0.23
GABPB1-208	ENST00000558970	MTIF3	Q9H2K0	278 aa	Known RBP	13.6	□□□□□ -0.23
GABPB1-208	ENST00000558970	CHST12	Q9NRB3	414 aa		13.6	□□□□□ -0.23
GABPB1-208	ENST00000558970	CTNND2	Q9UQB3	1225 aa		13.6	□□□□□ -0.23
GABPB1-208	ENST00000558970	TNFSF13B	Q9Y275	285 aa		13.6	□□□□□ -0.23
GABPB1-208	ENST00000558970	IPP	Q9Y573	584 aa		13.6	□□□□□ -0.23
GABPB1-208	ENST00000558970	UBE4B	O95155	1302 aa		13.6	□□□□□ -0.23
GABPB1-208	ENST00000558970	GOLGA8IP	A6NC78	632 aa		13.59	□□□□□ -0.23
GABPB1-208	ENST00000558970	TRIM49B	A6NDI0	452 aa		13.59	□□□□□ -0.23
GABPB1-208	ENST00000558970	GOLGA8J	A6NMD2	632 aa		13.59	□□□□□ -0.23
GABPB1-208	ENST00000558970	GRXCR1	A8MXD5	290 aa		13.59	□□□□□ -0.23
GABPB1-208	ENST00000558970	TOM1L1	O75674	476 aa		13.59	□□□□□ -0.23
GABPB1-208	ENST00000558970	FGFR1	P11362	822 aa		13.59	□□□□□ -0.23
GABPB1-208	ENST00000558970	ABCD1	P33897	745 aa		13.59	□□□□□ -0.23
GABPB1-208	ENST00000558970	CYP2J2	P51589	502 aa		13.59	□□□□□ -0.23
GABPB1-208	ENST00000558970	KNOP1	Q1ED39	458 aa	Known RBP	13.59	□□□□□ -0.23
GABPB1-208	ENST00000558970	PAN2	Q504Q3	1202 aa	Known RBP	13.59	□□□□□ -0.23
GABPB1-208	ENST00000558970	ZBTB41	Q5SVQ8	909 aa		13.59	□□□□□ -0.23
GABPB1-208	ENST00000558970	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.59	□□□□□ -0.23
GABPB1-208	ENST00000558970	ZPBP2	Q6X784	338 aa		13.59	□□□□□ -0.23
GABPB1-208	ENST00000558970	ECHDC2	Q86YB7	292 aa		13.59	□□□□□ -0.23
GABPB1-208	ENST00000558970	TMEM192	Q8IY95	271 aa		13.59	□□□□□ -0.23
GABPB1-208	ENST00000558970	SMG8	Q8ND04	991 aa	Known RBP	13.59	□□□□□ -0.23
GABPB1-208	ENST00000558970	CBWD1	Q9BRT8	395 aa		13.59	□□□□□ -0.23
GABPB1-208	ENST00000558970	ZBED2	Q9BTP6	218 aa		13.59	□□□□□ -0.23
GABPB1-208	ENST00000558970	GBP3	Q9H0R5	595 aa		13.59	□□□□□ -0.23
GABPB1-208	ENST00000558970	GZF1	Q9H116	711 aa	Predicted RBP	13.59	□□□□□ -0.23
GABPB1-208	ENST00000558970	RNF39	Q9H2S5	420 aa		13.59	□□□□□ -0.23
GABPB1-208	ENST00000558970	TMEM206	Q9H813	350 aa		13.59	□□□□□ -0.23
GABPB1-208	ENST00000558970	C1orf112	Q9NSG2	853 aa		13.59	□□□□□ -0.23
GABPB1-208	ENST00000558970	SNTG2	Q9NY99	539 aa		13.59	□□□□□ -0.23
GABPB1-208	ENST00000558970	KLK14	Q9P0G3	267 aa		13.59	□□□□□ -0.23
GABPB1-208	ENST00000558970	PARP2	Q9UGN5	583 aa		13.59	□□□□□ -0.23
GABPB1-208	ENST00000558970	INPP5F	Q9Y2H2	1132 aa		13.59	□□□□□ -0.23
GABPB1-208	ENST00000558970	PCDHB7	Q9Y5E2	793 aa		13.59	□□□□□ -0.23
GABPB1-208	ENST00000558970		A0A0U1RQF3	1178 aa		13.58	□□□□□ -0.24
GABPB1-208	ENST00000558970	SYCE3	A1L190	88 aa		13.58	□□□□□ -0.24
GABPB1-208	ENST00000558970	ABLIM1	O14639	778 aa		13.58	□□□□□ -0.24
GABPB1-208	ENST00000558970	TGFB1I1	O43294	461 aa		13.58	□□□□□ -0.24
GABPB1-208	ENST00000558970	EFCAB14	O75071	495 aa		13.58	□□□□□ -0.24
GABPB1-208	ENST00000558970	ITGA4	P13612	1032 aa		13.58	□□□□□ -0.24
GABPB1-208	ENST00000558970	ATP2A2	P16615	1042 aa	Known RBP	13.58	□□□□□ -0.24
GABPB1-208	ENST00000558970	ATF7	P17544	494 aa	Predicted RBP	13.58	□□□□□ -0.24
GABPB1-208	ENST00000558970	SCP2	P22307	547 aa		13.58	□□□□□ -0.24
GABPB1-208	ENST00000558970	TNFSF9	P41273	254 aa		13.58	□□□□□ -0.24
GABPB1-208	ENST00000558970	ACOT2	P49753	483 aa		13.58	□□□□□ -0.24
GABPB1-208	ENST00000558970	RAB27A	P51159	221 aa		13.58	□□□□□ -0.24
GABPB1-208	ENST00000558970	RABGGTB	P53611	331 aa		13.58	□□□□□ -0.24
GABPB1-208	ENST00000558970	STX17	P56962	302 aa		13.58	□□□□□ -0.24
GABPB1-208	ENST00000558970	STIM1	Q13586	685 aa		13.58	□□□□□ -0.24
GABPB1-208	ENST00000558970	BMT2	Q1RMZ1	405 aa		13.58	□□□□□ -0.24
GABPB1-208	ENST00000558970	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.58	□□□□□ -0.24
GABPB1-208	ENST00000558970	DPCR1	Q3MIW9	517 aa		13.58	□□□□□ -0.24
GABPB1-208	ENST00000558970	DCAF4L1	Q3SXM0	396 aa		13.58	□□□□□ -0.24
GABPB1-208	ENST00000558970	SASS6	Q6UVJ0	657 aa		13.58	□□□□□ -0.24
GABPB1-208	ENST00000558970	HS2ST1	Q7LGA3	356 aa		13.58	□□□□□ -0.24
GABPB1-208	ENST00000558970	TDH	Q8IZJ6	230 aa		13.58	□□□□□ -0.24
GABPB1-208	ENST00000558970	HELQ	Q8TDG4	1101 aa		13.58	□□□□□ -0.24
GABPB1-208	ENST00000558970	FAM212A	Q96EL1	285 aa		13.58	□□□□□ -0.24
GABPB1-208	ENST00000558970	EEF2KMT	Q96G04	330 aa		13.58	□□□□□ -0.24
GABPB1-208	ENST00000558970	PTPRH	Q9HD43	1115 aa		13.58	□□□□□ -0.24
GABPB1-208	ENST00000558970	AGO2	Q9UKV8	859 aa	Known RBP	13.58	□□□□□ -0.24
GABPB1-208	ENST00000558970	STXBP5L	Q9Y2K9	1186 aa		13.58	□□□□□ -0.24
GABPB1-208	ENST00000558970	COL4A6	Q14031	1691 aa		13.57	□□□□□ -0.24
GABPB1-208	ENST00000558970	KIF20A	O95235	890 aa		13.57	□□□□□ -0.24
GABPB1-208	ENST00000558970	PIGR	P01833	764 aa		13.57	□□□□□ -0.24
GABPB1-208	ENST00000558970	MCF2	P10911	925 aa		13.57	□□□□□ -0.24
GABPB1-208	ENST00000558970	PROZ	P22891	400 aa		13.57	□□□□□ -0.24
GABPB1-208	ENST00000558970	ADSS	P30520	456 aa		13.57	□□□□□ -0.24
GABPB1-208	ENST00000558970	MLH1	P40692	756 aa		13.57	□□□□□ -0.24
GABPB1-208	ENST00000558970	NLRP12	P59046	1061 aa		13.57	□□□□□ -0.24
GABPB1-208	ENST00000558970	RBM43	Q6ZSC3	357 aa	Known RBP	13.57	□□□□□ -0.24
GABPB1-208	ENST00000558970	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.57	□□□□□ -0.24
GABPB1-208	ENST00000558970	ADSSL1	Q8N142	457 aa		13.57	□□□□□ -0.24
GABPB1-208	ENST00000558970	GUF1	Q8N442	669 aa	Known RBP	13.57	□□□□□ -0.24
GABPB1-208	ENST00000558970	TRIML1	Q8N9V2	468 aa		13.57	□□□□□ -0.24
GABPB1-208	ENST00000558970	RDH13	Q8NBN7	331 aa		13.57	□□□□□ -0.24
GABPB1-208	ENST00000558970	NELFB	Q8WX92	580 aa		13.57	□□□□□ -0.24
GABPB1-208	ENST00000558970	CCDC51	Q96ER9	411 aa		13.57	□□□□□ -0.24
GABPB1-208	ENST00000558970	ZFP42	Q96MM3	310 aa		13.57	□□□□□ -0.24
GABPB1-208	ENST00000558970	FAM213A	Q9BRX8	229 aa		13.57	□□□□□ -0.24
GABPB1-208	ENST00000558970	CXCL16	Q9H2A7	254 aa		13.57	□□□□□ -0.24
GABPB1-208	ENST00000558970	KCTD10	Q9H3F6	313 aa		13.57	□□□□□ -0.24
GABPB1-208	ENST00000558970	SEMA6B	Q9H3T3	888 aa		13.57	□□□□□ -0.24
GABPB1-208	ENST00000558970	AGPAT3	Q9NRZ7	376 aa		13.57	□□□□□ -0.24
GABPB1-208	ENST00000558970	TYW1	Q9NV66	732 aa	Known RBP	13.57	□□□□□ -0.24
GABPB1-208	ENST00000558970	TBKBP1	A7MCY6	615 aa		13.56	□□□□□ -0.24
GABPB1-208	ENST00000558970	PPP1R3G	B7ZBB8	358 aa		13.56	□□□□□ -0.24
GABPB1-208	ENST00000558970	OGT	O15294	1046 aa		13.56	□□□□□ -0.24
GABPB1-208	ENST00000558970	RECQL4	O94761	1208 aa		13.56	□□□□□ -0.24
GABPB1-208	ENST00000558970	STAG3L1	P0CL83	205 aa		13.56	□□□□□ -0.24
GABPB1-208	ENST00000558970	CXCL8	P10145	99 aa		13.56	□□□□□ -0.24
GABPB1-208	ENST00000558970	MYOG	P15173	224 aa		13.56	□□□□□ -0.24
GABPB1-208	ENST00000558970	AFF1	P51825	1210 aa	Known RBP	13.56	□□□□□ -0.24

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