RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 KIF3AQ9Y496 699 aa6.72□□□□□ -1.33
CTDSPL2-204ENST00000558966 PCDHB6Q9Y5E3 794 aa6.72□□□□□ -1.33
CTDSPL2-204ENST00000558966 NCOR1O75376 2440 aa6.72□□□□□ -1.33
CTDSPL2-204ENST00000558966 ATG2AQ2TAZ0 1938 aa6.72□□□□□ -1.33
CTDSPL2-204ENST00000558966 A0A087WZ62 844 aa6.71□□□□□ -1.34
CTDSPL2-204ENST00000558966 C9IYK1 514 aa6.71□□□□□ -1.34
CTDSPL2-204ENST00000558966 GPR182O15218 404 aa6.71□□□□□ -1.34
CTDSPL2-204ENST00000558966 MED24O75448 989 aa6.71□□□□□ -1.34
CTDSPL2-204ENST00000558966 CSDE1O75534 798 aaKnown RBP6.71□□□□□ -1.34
CTDSPL2-204ENST00000558966 DGKIO75912 1065 aa6.71□□□□□ -1.34
CTDSPL2-204ENST00000558966 FAM13AO94988 1023 aa6.71□□□□□ -1.34
CTDSPL2-204ENST00000558966 NPR3P17342 541 aa6.71□□□□□ -1.34
CTDSPL2-204ENST00000558966 POU3F3P20264 500 aaPredicted RBP6.71□□□□□ -1.34
CTDSPL2-204ENST00000558966 TECP42680 631 aa6.71□□□□□ -1.34
CTDSPL2-204ENST00000558966 SARSP49591 514 aaKnown RBP6.71□□□□□ -1.34
CTDSPL2-204ENST00000558966 GATMP50440 423 aa6.71□□□□□ -1.34
CTDSPL2-204ENST00000558966 POLGP54098 1239 aaPredicted RBP6.71□□□□□ -1.34
CTDSPL2-204ENST00000558966 EMC2Q15006 297 aa6.71□□□□□ -1.34
CTDSPL2-204ENST00000558966 TEAD4Q15561 434 aa6.71□□□□□ -1.34
CTDSPL2-204ENST00000558966 XKR9Q5GH70 373 aa6.71□□□□□ -1.34
CTDSPL2-204ENST00000558966 MCTP1Q6DN14 999 aa6.71□□□□□ -1.34
CTDSPL2-204ENST00000558966 KSR1Q8IVT5 923 aa6.71□□□□□ -1.34
CTDSPL2-204ENST00000558966 SLC7A3Q8WY07 619 aa6.71□□□□□ -1.34
CTDSPL2-204ENST00000558966 ADAM2Q99965 735 aa6.71□□□□□ -1.34
CTDSPL2-204ENST00000558966 FDXACB1Q9BRP7 624 aaPredicted RBP6.71□□□□□ -1.34
CTDSPL2-204ENST00000558966 XPNPEP1Q9NQW7 623 aa6.71□□□□□ -1.34
CTDSPL2-204ENST00000558966 RGS18Q9NS28 235 aa6.71□□□□□ -1.34
CTDSPL2-204ENST00000558966 SUCLA2Q9P2R7 463 aaPredicted RBP6.71□□□□□ -1.34
CTDSPL2-204ENST00000558966 NOL7Q9UMY1 257 aaKnown RBP6.71□□□□□ -1.34
CTDSPL2-204ENST00000558966 SMC3Q9UQE7 1217 aa6.71□□□□□ -1.34
CTDSPL2-204ENST00000558966 PPME1Q9Y570 386 aa6.71□□□□□ -1.34
CTDSPL2-204ENST00000558966 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.71□□□□□ -1.34
CTDSPL2-204ENST00000558966 MTCH2Q9Y6C9 303 aa6.71□□□□□ -1.34
CTDSPL2-204ENST00000558966 A0A087WWV3 80 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 DENND3A2RUS2 1198 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 RARRES1P49788 294 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 DNM2P50570 870 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 EPC2Q52LR7 807 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 ODR4Q5SWX8 454 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 TMEM214Q6NUQ4 689 aaKnown RBP6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 SLC24A5Q71RS6 500 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 OTUD6AQ7L8S5 288 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 CATSPER3Q86XQ3 398 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 RHPN2Q8IUC4 686 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 FIBCD1Q8N539 461 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 MEIOBQ8N635 442 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 SLC17A8Q8NDX2 589 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 PIGOQ8TEQ8 1089 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 GIPC2Q8TF65 315 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 PPM1EQ8WY54 764 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 TMEM143Q96AN5 459 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 NLRP4Q96MN2 994 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 SCLT1Q96NL6 688 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 INSM2Q96T92 566 aaPredicted RBP6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 JPH2Q9BR39 696 aaPredicted RBP6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 PRDM6Q9NQX0 595 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 C1orf112Q9NSG2 853 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 ANKEF1Q9NU02 776 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 STIM2Q9P246 746 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 COL4A3BPQ9Y5P4 624 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 BDP1A6H8Y1 2624 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 H3BQV1 296 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 GAS2O43903 313 aaKnown RBP6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 STAG3L1P0CL83 205 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 IBSPP21815 317 aaPredicted RBP6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 EIF1AXP47813 144 aaKnown RBP6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 BTG3Q14201 252 aaPredicted RBP6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 CCDC85BQ15834 202 aaPredicted RBP6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 IL17AQ16552 155 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 PAN2Q504Q3 1202 aaKnown RBP6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 LARP1BQ659C4 914 aaKnown RBP6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 FAM43BQ6ZT52 329 aaPredicted RBP6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 ZNF410Q86VK4 478 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 TMEM192Q8IY95 271 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 CMTR2Q8IYT2 770 aaKnown RBP6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 ALDH16A1Q8IZ83 802 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 MICALL1Q8N3F8 863 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 PRPF31Q8WWY3 499 aaKnown RBP6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 PSPC1Q8WXF1 523 aaKnown RBP6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 ASB16Q96NS5 453 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 SAMD11Q96NU1 681 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 POLR3CQ9BUI4 534 aaPredicted RBP6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 GCOM2Q9BZD3 368 aaPredicted RBP6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 MINDY3Q9H8M7 445 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 IFT122Q9HBG6 1241 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 TUFT1Q9NNX1 390 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 RNF19AQ9NV58 838 aa6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 MRPL42Q9Y6G3 142 aaKnown RBP6.7□□□□□ -1.34
CTDSPL2-204ENST00000558966 C5orf67F2Z3F1 127 aa6.69□□□□□ -1.34
CTDSPL2-204ENST00000558966 DGAT1O75907 488 aa6.69□□□□□ -1.34
CTDSPL2-204ENST00000558966 FGFR1P11362 822 aa6.69□□□□□ -1.34
CTDSPL2-204ENST00000558966 ATF7P17544 494 aaPredicted RBP6.69□□□□□ -1.34
CTDSPL2-204ENST00000558966 RPA1P27694 616 aa6.69□□□□□ -1.34
CTDSPL2-204ENST00000558966 CTNNB1P35222 781 aa6.69□□□□□ -1.34
CTDSPL2-204ENST00000558966 FAM189BP81408 668 aa6.69□□□□□ -1.34
CTDSPL2-204ENST00000558966 CDC42EP1Q00587 391 aa6.69□□□□□ -1.34
CTDSPL2-204ENST00000558966 TAGLNQ01995 201 aaKnown RBP6.69□□□□□ -1.34
CTDSPL2-204ENST00000558966 LAMTOR4Q0VGL1 99 aa6.69□□□□□ -1.34
CTDSPL2-204ENST00000558966 RILPL1Q5EBL4 403 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms