RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 MAN2A1Q16706 1144 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 FAM47CQ5HY64 1035 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 FIGNQ5HY92 759 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 HABP4Q5JVS0 413 aaKnown RBP8.38□□□□□ -1.07
LRRC28-211ENST00000558890 ZNF569Q5MCW4 686 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 ODR4Q5SWX8 454 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 ZNF618Q5T7W0 954 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 ANKRD40Q6AI12 368 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 FBXO38Q6PIJ6 1188 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 MTHFD1LQ6UB35 978 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 STXBP4Q6ZWJ1 553 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 DYMQ7RTS9 669 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 RSPH3Q86UC2 560 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 GPBP1Q86WP2 473 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 IRF2BP1Q8IU81 584 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 KIAA0319LQ8IZA0 1049 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 MYOCDQ8IZQ8 938 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 CEP112Q8N8E3 955 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 USP38Q8NB14 1042 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 KIAA0895Q8NCT3 520 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 ACRBPQ8NEB7 543 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 LRRC15Q8TF66 581 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 TRAPPC12Q8WVT3 735 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 PSPC1Q8WXF1 523 aaKnown RBP8.38□□□□□ -1.07
LRRC28-211ENST00000558890 DDX12PQ92771 950 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 DNAJC19Q96DA6 116 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 SCLYQ96I15 445 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 WDR24Q96S15 920 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 DNAJC7Q99615 494 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 NAPGQ99747 312 aaPredicted RBP8.38□□□□□ -1.07
LRRC28-211ENST00000558890 C2orf40Q9H1Z8 148 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 PARVGQ9HBI0 331 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 SLC39A2Q9NP94 309 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 PRDM5Q9NQX1 630 aaPredicted RBP8.38□□□□□ -1.07
LRRC28-211ENST00000558890 MRFAP1Q9Y605 127 aa8.38□□□□□ -1.07
LRRC28-211ENST00000558890 A0A1W2PPC1 479 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 A0A1W2PQJ5 194 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 TTC26A0AVF1 554 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 EIF3DO15371 548 aaKnown RBP eCLIP8.37□□□□□ -1.07
LRRC28-211ENST00000558890 TBCAO75347 108 aaKnown RBP8.37□□□□□ -1.07
LRRC28-211ENST00000558890 NDUFA10O95299 355 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 PLS3P13797 630 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 H2AFXP16104 143 aaPredicted RBP8.37□□□□□ -1.07
LRRC28-211ENST00000558890 SELPP16109 830 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 KLRC1P26715 233 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 ARL2P36404 184 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 EFNA5P52803 228 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 SMTNP53814 917 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 ZBED6P86452 979 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 COASYQ13057 564 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 MAPK7Q13164 816 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 GIT2Q14161 759 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 ERCC6LQ2NKX8 1250 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 MTERF2Q49AM1 385 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 CCDC40Q4G0X9 1142 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 VWA3BQ502W6 1294 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 ARSHQ5FYA8 562 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 FAM26FQ5R3K3 315 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 TEX35Q5T0J7 233 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 CDCA2Q69YH5 1023 aaPredicted RBP8.37□□□□□ -1.07
LRRC28-211ENST00000558890 CENPPQ6IPU0 288 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 TMCO3Q6UWJ1 677 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 ZNF365Q70YC5 407 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 KIAA1328Q86T90 577 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 TXLNBQ8N3L3 684 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 ZNF507Q8TCN5 953 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 PIGOQ8TEQ8 1089 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 ERGIC2Q96RQ1 377 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.37□□□□□ -1.07
LRRC28-211ENST00000558890 REEP2Q9BRK0 252 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 PPP1R12CQ9BZL4 782 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 TSGA10Q9BZW7 698 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 INO80BQ9C086 356 aaPredicted RBP8.37□□□□□ -1.07
LRRC28-211ENST00000558890 HAUS4Q9H6D7 363 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 IL23AQ9NPF7 189 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 XPNPEP1Q9NQW7 623 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 PANK4Q9NVE7 773 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 EPN1Q9Y6I3 576 aaPredicted RBP8.37□□□□□ -1.07
LRRC28-211ENST00000558890 EVPLQ92817 2033 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 MYO9BQ13459 2157 aa8.37□□□□□ -1.07
LRRC28-211ENST00000558890 TMEM150BA6NC51 233 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 SOX1O00570 391 aaPredicted RBP8.36□□□□□ -1.07
LRRC28-211ENST00000558890 USO1O60763 962 aaKnown RBP8.36□□□□□ -1.07
LRRC28-211ENST00000558890 GNA14O95837 355 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 ACRP10323 421 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 NCKAP1LP55160 1127 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 NPEPPSP55786 919 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 CHMP4BP1P59074 171 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 FPGSQ05932 587 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 DMP1Q13316 513 aaPredicted RBP8.36□□□□□ -1.07
LRRC28-211ENST00000558890 BFSP2Q13515 415 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 SPA17Q15506 151 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 MEA1Q16626 185 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 FAM187BQ17R55 369 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 WHAMMP3Q1A5X7 153 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 BMT2Q1RMZ1 405 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 LRIT3Q3SXY7 679 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 PLA2G4FQ68DD2 849 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 EFCAB12Q6NXP0 572 aa8.36□□□□□ -1.07
LRRC28-211ENST00000558890 SRGAP1Q7Z6B7 1085 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms