RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 CTTNQ14247 550 aaKnown RBP16.93■□□□□ 0.3
RPL28-206ENST00000558752 MXD4Q14582 209 aaPredicted RBP16.93■□□□□ 0.3
RPL28-206ENST00000558752 RILPL1Q5EBL4 403 aa16.93■□□□□ 0.3
RPL28-206ENST00000558752 XKR9Q5GH70 373 aa16.93■□□□□ 0.3
RPL28-206ENST00000558752 PLA2G4FQ68DD2 849 aa16.93■□□□□ 0.3
RPL28-206ENST00000558752 HDAC7Q8WUI4 952 aa16.93■□□□□ 0.3
RPL28-206ENST00000558752 BCL7CQ8WUZ0 217 aaPredicted RBP16.93■□□□□ 0.3
RPL28-206ENST00000558752 NXPE3Q969Y0 559 aa16.93■□□□□ 0.3
RPL28-206ENST00000558752 NACC1Q96RE7 527 aa16.93■□□□□ 0.3
RPL28-206ENST00000558752 RPS6KC1Q96S38 1066 aa16.93■□□□□ 0.3
RPL28-206ENST00000558752 HERC2P3Q9BVR0 1158 aa16.93■□□□□ 0.3
RPL28-206ENST00000558752 RAB34Q9BZG1 259 aa16.93■□□□□ 0.3
RPL28-206ENST00000558752 SMOC2Q9H3U7 446 aa16.93■□□□□ 0.3
RPL28-206ENST00000558752 KCNK12Q9HB15 430 aa16.93■□□□□ 0.3
RPL28-206ENST00000558752 WRAP73Q9P2S5 460 aaPredicted RBP16.93■□□□□ 0.3
RPL28-206ENST00000558752 LILRB3O75022 631 aa16.92■□□□□ 0.3
RPL28-206ENST00000558752 DGAT1O75907 488 aa16.92■□□□□ 0.3
RPL28-206ENST00000558752 CD2BP2O95400 341 aaKnown RBP16.92■□□□□ 0.3
RPL28-206ENST00000558752 GLUD1P00367 558 aa16.92■□□□□ 0.3
RPL28-206ENST00000558752 POMCP01189 267 aa16.92■□□□□ 0.3
RPL28-206ENST00000558752 GLUD2P49448 558 aa16.92■□□□□ 0.3
RPL28-206ENST00000558752 CYP4A11Q02928 519 aa16.92■□□□□ 0.3
RPL28-206ENST00000558752 POU5F1BQ06416 359 aa16.92■□□□□ 0.3
RPL28-206ENST00000558752 CUL4AQ13619 759 aa16.92■□□□□ 0.3
RPL28-206ENST00000558752 KANK3Q6NY19 840 aa16.92■□□□□ 0.3
RPL28-206ENST00000558752 NOTUMQ6P988 496 aa16.92■□□□□ 0.3
RPL28-206ENST00000558752 C4orf32Q8N8J7 132 aa16.92■□□□□ 0.3
RPL28-206ENST00000558752 RNF149Q8NC42 400 aa16.92■□□□□ 0.3
RPL28-206ENST00000558752 TMEM143Q96AN5 459 aa16.92■□□□□ 0.3
RPL28-206ENST00000558752 MTRQ99707 1265 aa16.92■□□□□ 0.3
RPL28-206ENST00000558752 COLEC11Q9BWP8 271 aa16.92■□□□□ 0.3
RPL28-206ENST00000558752 TRIM6Q9C030 488 aaPredicted RBP16.92■□□□□ 0.3
RPL28-206ENST00000558752 MAN1C1Q9NR34 630 aa16.92■□□□□ 0.3
RPL28-206ENST00000558752 SPTBN4Q9H254 2564 aa16.91■□□□□ 0.3
RPL28-206ENST00000558752 STK25O00506 426 aa16.91■□□□□ 0.3
RPL28-206ENST00000558752 C2CD2LO14523 706 aa16.91■□□□□ 0.3
RPL28-206ENST00000558752 PDCP20941 246 aa16.91■□□□□ 0.3
RPL28-206ENST00000558752 RPA1P27694 616 aa16.91■□□□□ 0.3
RPL28-206ENST00000558752 HOXA11P31270 313 aaPredicted RBP16.91■□□□□ 0.3
RPL28-206ENST00000558752 GBP2P32456 591 aaPredicted RBP16.91■□□□□ 0.3
RPL28-206ENST00000558752 OR1G1P47890 313 aa16.91■□□□□ 0.3
RPL28-206ENST00000558752 FXR2P51116 673 aaKnown RBP eCLIP16.91■□□□□ 0.3
RPL28-206ENST00000558752 CREMQ03060 361 aa16.91■□□□□ 0.3
RPL28-206ENST00000558752 EMC2Q15006 297 aa16.91■□□□□ 0.3
RPL28-206ENST00000558752 LARP1BQ659C4 914 aaKnown RBP16.91■□□□□ 0.3
RPL28-206ENST00000558752 MCTP1Q6DN14 999 aa16.91■□□□□ 0.3
RPL28-206ENST00000558752 FERMT3Q86UX7 667 aa16.91■□□□□ 0.3
RPL28-206ENST00000558752 CCDC105Q8IYK2 499 aa16.91■□□□□ 0.3
RPL28-206ENST00000558752 GPR65Q8IYL9 337 aa16.91■□□□□ 0.3
RPL28-206ENST00000558752 CCDC43Q96MW1 224 aaKnown RBP16.91■□□□□ 0.3
RPL28-206ENST00000558752 VN1R3Q9BXE9 311 aa16.91■□□□□ 0.3
RPL28-206ENST00000558752 PLEKHA4Q9H4M7 779 aa16.91■□□□□ 0.3
RPL28-206ENST00000558752 WDR6Q9NNW5 1121 aaKnown RBP16.91■□□□□ 0.3
RPL28-206ENST00000558752 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.91■□□□□ 0.3
RPL28-206ENST00000558752 WNT16Q9UBV4 365 aa16.91■□□□□ 0.3
RPL28-206ENST00000558752 PRG3Q9Y2Y8 225 aaPredicted RBP16.91■□□□□ 0.3
RPL28-206ENST00000558752 CCDC195A0A1B0GUA6 201 aa16.9■□□□□ 0.3
RPL28-206ENST00000558752 SPATA31C1P0DKV0 1188 aa16.9■□□□□ 0.3
RPL28-206ENST00000558752 PRPHP41219 470 aa16.9■□□□□ 0.3
RPL28-206ENST00000558752 TOB1P50616 345 aaPredicted RBP16.9■□□□□ 0.3
RPL28-206ENST00000558752 HAUS3Q68CZ6 603 aa16.9■□□□□ 0.3
RPL28-206ENST00000558752 CATSPER3Q86XQ3 398 aa16.9■□□□□ 0.3
RPL28-206ENST00000558752 COLGALT2Q8IYK4 626 aa16.9■□□□□ 0.3
RPL28-206ENST00000558752 SIX5Q8N196 739 aa16.9■□□□□ 0.3
RPL28-206ENST00000558752 ZNF579Q8NAF0 562 aaKnown RBP16.9■□□□□ 0.3
RPL28-206ENST00000558752 SEMA4AQ9H3S1 761 aa16.9■□□□□ 0.3
RPL28-206ENST00000558752 PIDD1Q9HB75 910 aa16.9■□□□□ 0.3
RPL28-206ENST00000558752 DAXXQ9UER7 740 aaPredicted RBP16.9■□□□□ 0.3
RPL28-206ENST00000558752 IPPQ9Y573 584 aa16.9■□□□□ 0.3
RPL28-206ENST00000558752 PLXNA3P51805 1871 aa16.89■□□□□ 0.29
RPL28-206ENST00000558752 DENND4AQ7Z401 1863 aa16.89■□□□□ 0.29
RPL28-206ENST00000558752 ZBTB39O15060 712 aa16.89■□□□□ 0.29
RPL28-206ENST00000558752 INPPL1O15357 1258 aa16.89■□□□□ 0.29
RPL28-206ENST00000558752 RARRES1P49788 294 aa16.89■□□□□ 0.29
RPL28-206ENST00000558752 PTENP60484 403 aa16.89■□□□□ 0.29
RPL28-206ENST00000558752 DSG1Q02413 1049 aa16.89■□□□□ 0.29
RPL28-206ENST00000558752 PTGDRQ13258 359 aa16.89■□□□□ 0.29
RPL28-206ENST00000558752 UBXN11Q5T124 520 aa16.89■□□□□ 0.29
RPL28-206ENST00000558752 CWF19L1Q69YN2 538 aaKnown RBP16.89■□□□□ 0.29
RPL28-206ENST00000558752 FRMD5Q7Z6J6 570 aa16.89■□□□□ 0.29
RPL28-206ENST00000558752 KCTD17Q8N5Z5 321 aa16.89■□□□□ 0.29
RPL28-206ENST00000558752 INTS4Q96HW7 963 aaKnown RBP16.89■□□□□ 0.29
RPL28-206ENST00000558752 MINDY3Q9H8M7 445 aa16.89■□□□□ 0.29
RPL28-206ENST00000558752 RXFP1Q9HBX9 757 aa16.89■□□□□ 0.29
RPL28-206ENST00000558752 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.89■□□□□ 0.29
RPL28-206ENST00000558752 GIT1Q9Y2X7 761 aa16.89■□□□□ 0.29
RPL28-206ENST00000558752 GTF3C3Q9Y5Q9 886 aa16.89■□□□□ 0.29
RPL28-206ENST00000558752 RIF1Q5UIP0 2472 aaKnown RBP16.88■□□□□ 0.29
RPL28-206ENST00000558752 ARL5CA6NH57 179 aa16.88■□□□□ 0.29
RPL28-206ENST00000558752 POTEMA6NI47 508 aa16.88■□□□□ 0.29
RPL28-206ENST00000558752 INO80B-WBP1J3KQ70 363 aa16.88■□□□□ 0.29
RPL28-206ENST00000558752 TEX28O15482 410 aa16.88■□□□□ 0.29
RPL28-206ENST00000558752 ANGPT1Q15389 498 aa16.88■□□□□ 0.29
RPL28-206ENST00000558752 USP41Q3LFD5 358 aa16.88■□□□□ 0.29
RPL28-206ENST00000558752 KIAA0319Q5VV43 1072 aa16.88■□□□□ 0.29
RPL28-206ENST00000558752 DTHD1Q6ZMT9 781 aa16.88■□□□□ 0.29
RPL28-206ENST00000558752 ERMP1Q7Z2K6 904 aa16.88■□□□□ 0.29
RPL28-206ENST00000558752 DTWD2Q8NBA8 298 aa16.88■□□□□ 0.29
RPL28-206ENST00000558752 SMG8Q8ND04 991 aaKnown RBP16.88■□□□□ 0.29
RPL28-206ENST00000558752 MCPH1Q8NEM0 835 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms