RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 CHD7Q9P2D1 2997 aa13.71□□□□□ -0.21
LRRC28-206ENST00000558471 INPP5FQ9Y2H2 1132 aa13.71□□□□□ -0.21
LRRC28-206ENST00000558471 GADD45BO75293 160 aaPredicted RBP13.7□□□□□ -0.22
LRRC28-206ENST00000558471 CASP5P51878 434 aa13.7□□□□□ -0.22
LRRC28-206ENST00000558471 CSPP1Q1MSJ5 1256 aa13.7□□□□□ -0.22
LRRC28-206ENST00000558471 DCAF4L1Q3SXM0 396 aa13.7□□□□□ -0.22
LRRC28-206ENST00000558471 NOMO2Q5JPE7 1267 aa13.7□□□□□ -0.22
LRRC28-206ENST00000558471 ZPBP2Q6X784 338 aa13.7□□□□□ -0.22
LRRC28-206ENST00000558471 KRBA2Q6ZNG9 492 aa13.7□□□□□ -0.22
LRRC28-206ENST00000558471 UNC13DQ70J99 1090 aa13.7□□□□□ -0.22
LRRC28-206ENST00000558471 ZBTB33Q86T24 672 aa13.7□□□□□ -0.22
LRRC28-206ENST00000558471 HACE1Q8IYU2 909 aa13.7□□□□□ -0.22
LRRC28-206ENST00000558471 FMR1NBQ8N0W7 255 aaPredicted RBP13.7□□□□□ -0.22
LRRC28-206ENST00000558471 FBXO22Q8NEZ5 403 aa13.7□□□□□ -0.22
LRRC28-206ENST00000558471 ENGASEQ8NFI3 743 aa13.7□□□□□ -0.22
LRRC28-206ENST00000558471 MYLIPQ8WY64 445 aa13.7□□□□□ -0.22
LRRC28-206ENST00000558471 ZFP42Q96MM3 310 aa13.7□□□□□ -0.22
LRRC28-206ENST00000558471 GAD1Q99259 594 aa13.7□□□□□ -0.22
LRRC28-206ENST00000558471 FGFBP2Q9BYJ0 223 aa13.7□□□□□ -0.22
LRRC28-206ENST00000558471 CDT1Q9H211 546 aa13.7□□□□□ -0.22
LRRC28-206ENST00000558471 UBN1Q9NPG3 1134 aa13.7□□□□□ -0.22
LRRC28-206ENST00000558471 TBC1D13Q9NVG8 400 aa13.7□□□□□ -0.22
LRRC28-206ENST00000558471 MIOSQ9NXC5 875 aa13.7□□□□□ -0.22
LRRC28-206ENST00000558471 SNTG2Q9NY99 539 aa13.7□□□□□ -0.22
LRRC28-206ENST00000558471 KLK14Q9P0G3 267 aa13.7□□□□□ -0.22
LRRC28-206ENST00000558471 PARP2Q9UGN5 583 aa13.7□□□□□ -0.22
LRRC28-206ENST00000558471 GIT1Q9Y2X7 761 aa13.7□□□□□ -0.22
LRRC28-206ENST00000558471 CITO14578 2027 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 PVALEFA0A1B0GWK0 134 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 ARL5CA6NH57 179 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 C5orf67F2Z3F1 127 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 LPXNO60711 386 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 TOM1L1O75674 476 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 GCNT3O95395 438 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 POMCP01189 267 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 PIGRP01833 764 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 RB1P06400 928 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 MYBP10242 640 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 ABCD1P33897 745 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 CTNNB1P35222 781 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 MLH1P40692 756 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 EHHADHQ08426 723 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 KCNA1Q09470 495 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 SNW1Q13573 536 aaKnown RBP13.69□□□□□ -0.22
LRRC28-206ENST00000558471 ADGRE1Q14246 886 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 ZNF568Q3ZCX4 644 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 SPOUT1Q5T280 376 aaKnown RBP13.69□□□□□ -0.22
LRRC28-206ENST00000558471 MPZL3Q6UWV2 235 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 APBB1IPQ7Z5R6 666 aaPredicted RBP13.69□□□□□ -0.22
LRRC28-206ENST00000558471 MAP4K3Q8IVH8 894 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 LRRC43Q8N309 656 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 CEP120Q8N960 986 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 TMEM87AQ8NBN3 555 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 GSTCDQ8NEC7 633 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 HVCN1Q96D96 273 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 BICD1Q96G01 975 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 MRPL9Q9BYD2 267 aaKnown RBP13.69□□□□□ -0.22
LRRC28-206ENST00000558471 HAPLN2Q9GZV7 340 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 IKZF4Q9H2S9 585 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 ANKFY1Q9P2R3 1169 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 GDAQ9Y2T3 454 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 RWDD3Q9Y3V2 267 aa13.69□□□□□ -0.22
LRRC28-206ENST00000558471 COL4A4P53420 1690 aaPredicted RBP13.69□□□□□ -0.22
LRRC28-206ENST00000558471 CDH23Q9H251 3354 aa13.68□□□□□ -0.22
LRRC28-206ENST00000558471 PLXNA4Q9HCM2 1894 aa13.68□□□□□ -0.22
LRRC28-206ENST00000558471 ANKRD63C9JTQ0 380 aa13.68□□□□□ -0.22
LRRC28-206ENST00000558471 H3BNC9 293 aa13.68□□□□□ -0.22
LRRC28-206ENST00000558471 HNRNPDLO14979 420 aaKnown RBP13.68□□□□□ -0.22
LRRC28-206ENST00000558471 INPPL1O15357 1258 aa13.68□□□□□ -0.22
LRRC28-206ENST00000558471 CLDN3O15551 220 aa13.68□□□□□ -0.22
LRRC28-206ENST00000558471 GTPBP6O43824 516 aaPredicted RBP13.68□□□□□ -0.22
LRRC28-206ENST00000558471 KLRC4O43908 158 aa13.68□□□□□ -0.22
LRRC28-206ENST00000558471 RECQL4O94761 1208 aa13.68□□□□□ -0.22
LRRC28-206ENST00000558471 DDHD2O94830 711 aa13.68□□□□□ -0.22
LRRC28-206ENST00000558471 PRPF6O94906 941 aaKnown RBP13.68□□□□□ -0.22
LRRC28-206ENST00000558471 PRR29P0C7W0 189 aa13.68□□□□□ -0.22
LRRC28-206ENST00000558471 MCF2P10911 925 aa13.68□□□□□ -0.22
LRRC28-206ENST00000558471 LIG4P49917 911 aa13.68□□□□□ -0.22
LRRC28-206ENST00000558471 OSTNP61366 133 aa13.68□□□□□ -0.22
LRRC28-206ENST00000558471 GPM6BQ13491 265 aa13.68□□□□□ -0.22
LRRC28-206ENST00000558471 SLC39A4Q6P5W5 647 aa13.68□□□□□ -0.22
LRRC28-206ENST00000558471 ZNF280BQ86YH2 543 aa13.68□□□□□ -0.22
LRRC28-206ENST00000558471 THNSL1Q8IYQ7 743 aa13.68□□□□□ -0.22
LRRC28-206ENST00000558471 GLIS3Q8NEA6 775 aa13.68□□□□□ -0.22
LRRC28-206ENST00000558471 URGCPQ8TCY9 931 aa13.68□□□□□ -0.22
LRRC28-206ENST00000558471 GDPD5Q8WTR4 605 aa13.68□□□□□ -0.22
LRRC28-206ENST00000558471 RSPH1Q8WYR4 309 aa13.68□□□□□ -0.22
LRRC28-206ENST00000558471 PLVAPQ9BX97 442 aa13.68□□□□□ -0.22
LRRC28-206ENST00000558471 CXCL16Q9H2A7 254 aa13.68□□□□□ -0.22
LRRC28-206ENST00000558471 NRDE2Q9H7Z3 1164 aa13.68□□□□□ -0.22
LRRC28-206ENST00000558471 KANSL3Q9P2N6 904 aa13.68□□□□□ -0.22
LRRC28-206ENST00000558471 PCDHB13Q9Y5F0 798 aa13.68□□□□□ -0.22
LRRC28-206ENST00000558471 TISP43B9A030 160 aa13.67□□□□□ -0.22
LRRC28-206ENST00000558471 B4GALT3O60512 393 aa13.67□□□□□ -0.22
LRRC28-206ENST00000558471 MYL1P05976 194 aa13.67□□□□□ -0.22
LRRC28-206ENST00000558471 HARSP12081 509 aaKnown RBP13.67□□□□□ -0.22
LRRC28-206ENST00000558471 LAG3P18627 525 aa13.67□□□□□ -0.22
LRRC28-206ENST00000558471 IGFBP4P22692 258 aa13.67□□□□□ -0.22
LRRC28-206ENST00000558471 PBX3P40426 434 aa13.67□□□□□ -0.22
LRRC28-206ENST00000558471 GRM5P41594 1212 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms