RNA–Protein interactions for RNA: ENST00000558469.5

CUX1-216, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-216ENST00000558469 TRAF3IP3Q9Y228 551 aa10.51□□□□□ -0.73
CUX1-216ENST00000558469 TNFSF13BQ9Y275 285 aa10.51□□□□□ -0.73
CUX1-216ENST00000558469 RALGAPA2Q2PPJ7 1873 aa10.51□□□□□ -0.73
CUX1-216ENST00000558469 NPTXRO95502 500 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 CAVIN2O95810 425 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 CXCL10P02778 98 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 NR3C1P04150 777 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 HARSP12081 509 aaKnown RBP10.5□□□□□ -0.73
CUX1-216ENST00000558469 CSF2RAP15509 400 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 ZSCAN20P17040 1043 aaPredicted RBP10.5□□□□□ -0.73
CUX1-216ENST00000558469 SYN1P17600 705 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 GARTP22102 1010 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 PROZP22891 400 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 NR2F2P24468 414 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 RFC2P35250 354 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 ADAM9Q13443 819 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 NOLC1Q14978 699 aaKnown RBP eCLIP10.5□□□□□ -0.73
CUX1-216ENST00000558469 EDRF1Q3B7T1 1238 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 ZNF568Q3ZCX4 644 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 PLEKHG4Q58EX7 1191 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 IER5LQ5T953 404 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 TWF2Q6IBS0 349 aaKnown RBP10.5□□□□□ -0.73
CUX1-216ENST00000558469 MFSD5Q6N075 450 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 SLC27A1Q6PCB7 646 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 MPZL3Q6UWV2 235 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 CSGALNACT2Q8N6G5 542 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 AOPEPQ8N6M6 819 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 ZSWIM2Q8NEG5 633 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 DBF4BQ8NFT6 615 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 SEPT8Q92599 483 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 EEF2KMTQ96G04 330 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 ADAM2Q99965 735 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 BPIFA3Q9BQP9 254 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 ADPGKQ9BRR6 497 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 CBWD1Q9BRT8 395 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 MSTO1Q9BUK6 570 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 EIF2AQ9BY44 585 aaKnown RBP10.5□□□□□ -0.73
CUX1-216ENST00000558469 TMX1Q9H3N1 280 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 CBX8Q9HC52 389 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 CHST12Q9NRB3 414 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 HSPBP1Q9NZL4 362 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 AGO2Q9UKV8 859 aaKnown RBP10.5□□□□□ -0.73
CUX1-216ENST00000558469 STYXL1Q9Y6J8 313 aa10.5□□□□□ -0.73
CUX1-216ENST00000558469 PTPRSQ13332 1948 aa10.49□□□□□ -0.73
CUX1-216ENST00000558469 A0A0B4J269 797 aa10.49□□□□□ -0.73
CUX1-216ENST00000558469 GOLGA8IPA6NC78 632 aa10.49□□□□□ -0.73
CUX1-216ENST00000558469 GOLGA8JA6NMD2 632 aa10.49□□□□□ -0.73
CUX1-216ENST00000558469 SMTNL1A8MU46 457 aa10.49□□□□□ -0.73
CUX1-216ENST00000558469 ABLIM1O14639 778 aa10.49□□□□□ -0.73
CUX1-216ENST00000558469 MGEA5O60502 916 aa10.49□□□□□ -0.73
CUX1-216ENST00000558469 MCF2P10911 925 aa10.49□□□□□ -0.73
CUX1-216ENST00000558469 RPL13P26373 211 aaKnown RBP10.49□□□□□ -0.73
CUX1-216ENST00000558469 FKBP3Q00688 224 aaKnown RBP10.49□□□□□ -0.73
CUX1-216ENST00000558469 MYL5Q02045 173 aa10.49□□□□□ -0.73
CUX1-216ENST00000558469 MCL1Q07820 350 aa10.49□□□□□ -0.73
CUX1-216ENST00000558469 PDAP1Q13442 181 aaKnown RBP10.49□□□□□ -0.73
CUX1-216ENST00000558469 DSC3Q14574 896 aa10.49□□□□□ -0.73
CUX1-216ENST00000558469 NFIL3Q16649 462 aa10.49□□□□□ -0.73
CUX1-216ENST00000558469 TCTN1Q2MV58 587 aa10.49□□□□□ -0.73
CUX1-216ENST00000558469 SEZ6Q53EL9 994 aa10.49□□□□□ -0.73
CUX1-216ENST00000558469 SPATA1Q5VX52 437 aa10.49□□□□□ -0.73
CUX1-216ENST00000558469 FOXR2Q6PJQ5 311 aa10.49□□□□□ -0.73
CUX1-216ENST00000558469 APBB1IPQ7Z5R6 666 aaPredicted RBP10.49□□□□□ -0.73
CUX1-216ENST00000558469 LUZP1Q86V48 1076 aa10.49□□□□□ -0.73
CUX1-216ENST00000558469 GAS2L3Q86XJ1 694 aa10.49□□□□□ -0.73
CUX1-216ENST00000558469 DHX40Q8IX18 779 aaKnown RBP10.49□□□□□ -0.73
CUX1-216ENST00000558469 C12orf56Q8IXR9 622 aa10.49□□□□□ -0.73
CUX1-216ENST00000558469 XXYLT1Q8NBI6 393 aa10.49□□□□□ -0.73
CUX1-216ENST00000558469 RDH13Q8NBN7 331 aa10.49□□□□□ -0.73
CUX1-216ENST00000558469 ENOX1Q8TC92 643 aaKnown RBP10.49□□□□□ -0.73
CUX1-216ENST00000558469 APBB2Q92870 758 aa10.49□□□□□ -0.73
CUX1-216ENST00000558469 BADQ92934 168 aa10.49□□□□□ -0.73
CUX1-216ENST00000558469 SAAL1Q96ER3 474 aa10.49□□□□□ -0.73
CUX1-216ENST00000558469 SRRTQ9BXP5 876 aaKnown RBP10.49□□□□□ -0.73
CUX1-216ENST00000558469 TRIM6Q9C030 488 aaPredicted RBP10.49□□□□□ -0.73
CUX1-216ENST00000558469 CDT1Q9H211 546 aa10.49□□□□□ -0.73
CUX1-216ENST00000558469 DMAC2Q9NW81 257 aa10.49□□□□□ -0.73
CUX1-216ENST00000558469 ZMYND8Q9ULU4 1186 aaPredicted RBP10.49□□□□□ -0.73
CUX1-216ENST00000558469 COLQQ9Y215 455 aaPredicted RBP10.49□□□□□ -0.73
CUX1-216ENST00000558469 TTC3P53804 2025 aa10.48□□□□□ -0.73
CUX1-216ENST00000558469 BECN2A8MW95 431 aa10.48□□□□□ -0.73
CUX1-216ENST00000558469 TULP1O00294 542 aaPredicted RBP10.48□□□□□ -0.73
CUX1-216ENST00000558469 IKBKBO14920 756 aa10.48□□□□□ -0.73
CUX1-216ENST00000558469 KIAA0391O15091 583 aaKnown RBP10.48□□□□□ -0.73
CUX1-216ENST00000558469 CETN3O15182 167 aa10.48□□□□□ -0.73
CUX1-216ENST00000558469 OGTO15294 1046 aa10.48□□□□□ -0.73
CUX1-216ENST00000558469 EXOC3O60645 756 aa10.48□□□□□ -0.73
CUX1-216ENST00000558469 FGFR1OPO95684 399 aaKnown RBP10.48□□□□□ -0.73
CUX1-216ENST00000558469 LDHAP00338 332 aaKnown RBP10.48□□□□□ -0.73
CUX1-216ENST00000558469 ACRP10323 421 aa10.48□□□□□ -0.73
CUX1-216ENST00000558469 IBSPP21815 317 aaPredicted RBP10.48□□□□□ -0.73
CUX1-216ENST00000558469 CASP4P49662 377 aa10.48□□□□□ -0.73
CUX1-216ENST00000558469 ACOT2P49753 483 aa10.48□□□□□ -0.73
CUX1-216ENST00000558469 OSTNP61366 133 aa10.48□□□□□ -0.73
CUX1-216ENST00000558469 FPGSQ05932 587 aa10.48□□□□□ -0.73
CUX1-216ENST00000558469 IQCB1Q15051 598 aa10.48□□□□□ -0.73
CUX1-216ENST00000558469 DCAF4L1Q3SXM0 396 aa10.48□□□□□ -0.73
CUX1-216ENST00000558469 HSP90AA4PQ58FG1 418 aa10.48□□□□□ -0.73
CUX1-216ENST00000558469 UBXN11Q5T124 520 aa10.48□□□□□ -0.73
CUX1-216ENST00000558469 CEP135Q66GS9 1140 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms