RNA–Protein interactions for RNA: ENST00000558216.1

CHRNB4-203, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 2

Gene CHRNB4, Length 578 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-203ENST00000558216 ITGB1P05556 798 aa14.66□□□□□ -0.06
CHRNB4-203ENST00000558216 KRT18P05783 430 aaKnown RBP14.66□□□□□ -0.06
CHRNB4-203ENST00000558216 PLS3P13797 630 aa14.66□□□□□ -0.06
CHRNB4-203ENST00000558216 ABCD1P33897 745 aa14.66□□□□□ -0.06
CHRNB4-203ENST00000558216 GTF2F1P35269 517 aaKnown RBP eCLIP14.66□□□□□ -0.06
CHRNB4-203ENST00000558216 DDIT3P35638 169 aa14.66□□□□□ -0.06
CHRNB4-203ENST00000558216 ALDH7A1P49419 539 aaKnown RBP14.66□□□□□ -0.06
CHRNB4-203ENST00000558216 PLCB3Q01970 1234 aa14.66□□□□□ -0.06
CHRNB4-203ENST00000558216 KRT17Q04695 432 aa14.66□□□□□ -0.06
CHRNB4-203ENST00000558216 RNASELQ05823 741 aaKnown RBP14.66□□□□□ -0.06
CHRNB4-203ENST00000558216 HYAL1Q12794 435 aa14.66□□□□□ -0.06
CHRNB4-203ENST00000558216 RRAGBQ5VZM2 374 aa14.66□□□□□ -0.06
CHRNB4-203ENST00000558216 PDE12Q6L8Q7 609 aaKnown RBP14.66□□□□□ -0.06
CHRNB4-203ENST00000558216 KCNT2Q6UVM3 1135 aa14.66□□□□□ -0.06
CHRNB4-203ENST00000558216 AGMOQ6ZNB7 445 aa14.66□□□□□ -0.06
CHRNB4-203ENST00000558216 CCDC73Q6ZRK6 1079 aa14.66□□□□□ -0.06
CHRNB4-203ENST00000558216 LRRC55Q6ZSA7 311 aa14.66□□□□□ -0.06
CHRNB4-203ENST00000558216 GPBP1Q86WP2 473 aa14.66□□□□□ -0.06
CHRNB4-203ENST00000558216 SMG8Q8ND04 991 aaKnown RBP14.66□□□□□ -0.06
CHRNB4-203ENST00000558216 SPPL3Q8TCT6 385 aa14.66□□□□□ -0.06
CHRNB4-203ENST00000558216 KCNG4Q8TDN1 519 aa14.66□□□□□ -0.06
CHRNB4-203ENST00000558216 LARP4BQ92615 738 aaKnown RBP14.66□□□□□ -0.06
CHRNB4-203ENST00000558216 LPPQ93052 612 aa14.66□□□□□ -0.06
CHRNB4-203ENST00000558216 NTPCRQ9BSD7 190 aaKnown RBP14.66□□□□□ -0.06
CHRNB4-203ENST00000558216 EIF2AQ9BY44 585 aaKnown RBP14.66□□□□□ -0.06
CHRNB4-203ENST00000558216 STK39Q9UEW8 545 aa14.66□□□□□ -0.06
CHRNB4-203ENST00000558216 GIT1Q9Y2X7 761 aa14.66□□□□□ -0.06
CHRNB4-203ENST00000558216 INPPL1O15357 1258 aa14.65□□□□□ -0.06
CHRNB4-203ENST00000558216 FGF18O76093 207 aa14.65□□□□□ -0.06
CHRNB4-203ENST00000558216 NPTXRO95502 500 aa14.65□□□□□ -0.06
CHRNB4-203ENST00000558216 LIG1P18858 919 aa14.65□□□□□ -0.06
CHRNB4-203ENST00000558216 MAPK7Q13164 816 aa14.65□□□□□ -0.06
CHRNB4-203ENST00000558216 BMS1Q14692 1282 aaKnown RBP14.65□□□□□ -0.06
CHRNB4-203ENST00000558216 DCAF4L1Q3SXM0 396 aa14.65□□□□□ -0.06
CHRNB4-203ENST00000558216 FOXD4L5Q5VV16 416 aaPredicted RBP14.65□□□□□ -0.06
CHRNB4-203ENST00000558216 POF1BQ8WVV4 589 aa14.65□□□□□ -0.06
CHRNB4-203ENST00000558216 FOXD4L4Q8WXT5 416 aaPredicted RBP14.65□□□□□ -0.06
CHRNB4-203ENST00000558216 EDAQ92838 391 aa14.65□□□□□ -0.06
CHRNB4-203ENST00000558216 EPSTI1Q96J88 318 aa14.65□□□□□ -0.06
CHRNB4-203ENST00000558216 CLIC6Q96NY7 704 aa14.65□□□□□ -0.06
CHRNB4-203ENST00000558216 FAM193BQ96PV7 902 aaPredicted RBP14.65□□□□□ -0.06
CHRNB4-203ENST00000558216 POP1Q99575 1024 aaKnown RBP14.65□□□□□ -0.06
CHRNB4-203ENST00000558216 MRPL4Q9BYD3 311 aaKnown RBP14.65□□□□□ -0.06
CHRNB4-203ENST00000558216 ALG13Q9NP73 1137 aaKnown RBP14.65□□□□□ -0.06
CHRNB4-203ENST00000558216 BLOC1S4Q9NUP1 217 aa14.65□□□□□ -0.06
CHRNB4-203ENST00000558216 TBC1D13Q9NVG8 400 aa14.65□□□□□ -0.06
CHRNB4-203ENST00000558216 SPG21Q9NZD8 308 aa14.65□□□□□ -0.06
CHRNB4-203ENST00000558216 ARHGAP28Q9P2N2 729 aa14.65□□□□□ -0.06
CHRNB4-203ENST00000558216 INPP5FQ9Y2H2 1132 aa14.65□□□□□ -0.06
CHRNB4-203ENST00000558216 ATP6V1DQ9Y5K8 247 aa14.65□□□□□ -0.06
CHRNB4-203ENST00000558216 VPS13AQ96RL7 3174 aa14.65□□□□□ -0.06
CHRNB4-203ENST00000558216 WDR87Q6ZQQ6 2873 aa14.64□□□□□ -0.07
CHRNB4-203ENST00000558216 FSD2A1L4K1 749 aa14.64□□□□□ -0.07
CHRNB4-203ENST00000558216 LINC01565O15544 149 aa14.64□□□□□ -0.07
CHRNB4-203ENST00000558216 TBCAO75347 108 aaKnown RBP14.64□□□□□ -0.07
CHRNB4-203ENST00000558216 FAM13AO94988 1023 aa14.64□□□□□ -0.07
CHRNB4-203ENST00000558216 CSPG5O95196 566 aa14.64□□□□□ -0.07
CHRNB4-203ENST00000558216 RAD51AP2Q09MP3 1159 aa14.64□□□□□ -0.07
CHRNB4-203ENST00000558216 STRN3Q13033 797 aa14.64□□□□□ -0.07
CHRNB4-203ENST00000558216 SMAD4Q13485 552 aaKnown RBP14.64□□□□□ -0.07
CHRNB4-203ENST00000558216 LONRF3Q496Y0 759 aa14.64□□□□□ -0.07
CHRNB4-203ENST00000558216 ARSHQ5FYA8 562 aa14.64□□□□□ -0.07
CHRNB4-203ENST00000558216 ATF7IP2Q5U623 682 aa14.64□□□□□ -0.07
CHRNB4-203ENST00000558216 MRPS27Q92552 414 aaKnown RBP14.64□□□□□ -0.07
CHRNB4-203ENST00000558216 KIFC3Q9BVG8 833 aa14.64□□□□□ -0.07
CHRNB4-203ENST00000558216 PDZD7Q9H5P4 517 aa14.64□□□□□ -0.07
CHRNB4-203ENST00000558216 PARVGQ9HBI0 331 aa14.64□□□□□ -0.07
CHRNB4-203ENST00000558216 POLD4Q9HCU8 107 aa14.64□□□□□ -0.07
CHRNB4-203ENST00000558216 TFIP11Q9UBB9 837 aaKnown RBP14.64□□□□□ -0.07
CHRNB4-203ENST00000558216 RIF1Q5UIP0 2472 aaKnown RBP14.64□□□□□ -0.07
CHRNB4-203ENST00000558216 PLXNA4Q9HCM2 1894 aa14.63□□□□□ -0.07
CHRNB4-203ENST00000558216 PTPRZ1P23471 2315 aaPredicted RBP14.63□□□□□ -0.07
CHRNB4-203ENST00000558216 TMEM221A6NGB7 291 aa14.63□□□□□ -0.07
CHRNB4-203ENST00000558216 ARL5CA6NH57 179 aa14.63□□□□□ -0.07
CHRNB4-203ENST00000558216 MEIS3P2A8K0S8 358 aa14.63□□□□□ -0.07
CHRNB4-203ENST00000558216 M0R296 226 aa14.63□□□□□ -0.07
CHRNB4-203ENST00000558216 CUTAO60888 179 aa14.63□□□□□ -0.07
CHRNB4-203ENST00000558216 ZC3H11AO75152 810 aaKnown RBP eCLIP14.63□□□□□ -0.07
CHRNB4-203ENST00000558216 NR1I2O75469 434 aa14.63□□□□□ -0.07
CHRNB4-203ENST00000558216 PTPN5P54829 565 aa14.63□□□□□ -0.07
CHRNB4-203ENST00000558216 BCAR1P56945 870 aa14.63□□□□□ -0.07
CHRNB4-203ENST00000558216 TCF15Q12870 199 aa14.63□□□□□ -0.07
CHRNB4-203ENST00000558216 DHX8Q14562 1220 aaKnown RBP14.63□□□□□ -0.07
CHRNB4-203ENST00000558216 MCM6Q14566 821 aa14.63□□□□□ -0.07
CHRNB4-203ENST00000558216 SPECC1Q5M775 1068 aa14.63□□□□□ -0.07
CHRNB4-203ENST00000558216 USP49Q70CQ1 688 aa14.63□□□□□ -0.07
CHRNB4-203ENST00000558216 SV2BQ7L1I2 683 aa14.63□□□□□ -0.07
CHRNB4-203ENST00000558216 BMP8AQ7Z5Y6 402 aa14.63□□□□□ -0.07
CHRNB4-203ENST00000558216 SLC39A11Q8N1S5 342 aa14.63□□□□□ -0.07
CHRNB4-203ENST00000558216 KCNN1Q92952 543 aa14.63□□□□□ -0.07
CHRNB4-203ENST00000558216 TMEM169Q96HH4 297 aa14.63□□□□□ -0.07
CHRNB4-203ENST00000558216 REEP2Q9BRK0 252 aa14.63□□□□□ -0.07
CHRNB4-203ENST00000558216 TMEM175Q9BSA9 504 aa14.63□□□□□ -0.07
CHRNB4-203ENST00000558216 NGRNQ9NPE2 291 aaKnown RBP14.63□□□□□ -0.07
CHRNB4-203ENST00000558216 TLR9Q9NR96 1032 aa14.63□□□□□ -0.07
CHRNB4-203ENST00000558216 TNFSF13BQ9Y275 285 aa14.63□□□□□ -0.07
CHRNB4-203ENST00000558216 CACNA1AO00555 2505 aa14.62□□□□□ -0.07
CHRNB4-203ENST00000558216 SFI1A8K8P3 1242 aa14.62□□□□□ -0.07
CHRNB4-203ENST00000558216 SLC16A4O15374 487 aa14.62□□□□□ -0.07
CHRNB4-203ENST00000558216 BRD1O95696 1058 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms