RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 GAS7O60861 476 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 LILRB5O75023 590 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 LRP3O75074 770 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 ZMYND10O75800 440 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 IGHDP01880 384 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 HNRNPA1P09651 372 aaKnown RBP eCLIP5.81□□□□□ -1.48
SPG11-208ENST00000558155 ITGA4P13612 1032 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 TGM1P22735 817 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 GNA11P29992 359 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 CIITAP33076 1130 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 RPS9P46781 194 aaKnown RBP5.81□□□□□ -1.48
SPG11-208ENST00000558155 PRKCEQ02156 737 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 CREMQ03060 361 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 DMWDQ09019 674 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 NCBP1Q09161 790 aaKnown RBP5.81□□□□□ -1.48
SPG11-208ENST00000558155 DRP2Q13474 957 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 PPP2R5DQ14738 602 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 RTN1Q16799 776 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 PROX2Q3B8N5 592 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 USP41Q3LFD5 358 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 MTERF2Q49AM1 385 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 PPM1JQ5JR12 505 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 TTC22Q5TAA0 569 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 LILRA6Q6PI73 481 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 PARM1Q6UWI2 310 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 ZNF852Q6ZMS4 543 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 SRGAP1Q7Z6B7 1085 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 COLGALT2Q8IYK4 626 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 HS6ST3Q8IZP7 471 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 CELF5Q8N6W0 485 aaKnown RBP5.81□□□□□ -1.48
SPG11-208ENST00000558155 RDM1Q8NG50 284 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 EXOC6Q8TAG9 804 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 NETO1Q8TDF5 533 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 CCDC12Q8WUD4 166 aaPredicted RBP5.81□□□□□ -1.48
SPG11-208ENST00000558155 CRYGNQ8WXF5 182 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 DDX1Q92499 740 aaKnown RBP5.81□□□□□ -1.48
SPG11-208ENST00000558155 NELL1Q92832 810 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 CLDN23Q96B33 292 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 ZNF707Q96C28 371 aaPredicted RBP5.81□□□□□ -1.48
SPG11-208ENST00000558155 NLRP4Q96MN2 994 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 RIT2Q99578 217 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 RPP25Q9BUL9 199 aaKnown RBP5.81□□□□□ -1.48
SPG11-208ENST00000558155 LTB4R2Q9NPC1 389 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 CHST7Q9NS84 486 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 PRG3Q9Y2Y8 225 aaPredicted RBP5.81□□□□□ -1.48
SPG11-208ENST00000558155 MTF2Q9Y483 593 aaPredicted RBP5.81□□□□□ -1.48
SPG11-208ENST00000558155 DOCK6Q96HP0 2047 aa5.81□□□□□ -1.48
SPG11-208ENST00000558155 NCOR2Q9Y618 2525 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 CCDC196A0A1B0GTZ2 297 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 ESYT2A0FGR8 921 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 MAN2B1O00754 1011 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 ASAP2O43150 1006 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 ZBTB43O43298 467 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 CHMP2AO43633 222 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 B4GALT3O60512 393 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 FOXD2O60548 495 aaPredicted RBP5.8□□□□□ -1.48
SPG11-208ENST00000558155 XYLBO75191 536 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 MAFO75444 373 aaPredicted RBP5.8□□□□□ -1.48
SPG11-208ENST00000558155 TADA2AO75478 443 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 RETP07949 1114 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 SRGAP2CP0DJJ0 459 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 NCLP19338 710 aaKnown RBP5.8□□□□□ -1.48
SPG11-208ENST00000558155 CD72P21854 359 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 AXLP30530 894 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 USP11P51784 963 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 ADCY1Q08828 1119 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 SPEM2Q0P670 501 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 COL9A3Q14050 684 aaPredicted RBP5.8□□□□□ -1.48
SPG11-208ENST00000558155 PPM1LQ5SGD2 360 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 PPP1R15BQ5SWA1 713 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 LAIR1Q6GTX8 287 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 MIER3Q7Z3K6 550 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 GRASPQ7Z6J2 395 aaPredicted RBP5.8□□□□□ -1.48
SPG11-208ENST00000558155 GLYCTKQ8IVS8 523 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 KSR1Q8IVT5 923 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 HACE1Q8IYU2 909 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 RNF168Q8IYW5 571 aaPredicted RBP5.8□□□□□ -1.48
SPG11-208ENST00000558155 REXO1Q8N1G1 1221 aaKnown RBP5.8□□□□□ -1.48
SPG11-208ENST00000558155 ST13P5Q8NFI4 369 aaPredicted RBP5.8□□□□□ -1.48
SPG11-208ENST00000558155 BICD2Q8TD16 824 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 FGF14Q92915 247 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 CCDC136Q96JN2 1154 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 PHF20Q9BVI0 1012 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 TEKT3Q9BXF9 490 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 LRRC2Q9BYS8 371 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 ZMYND12Q9H0C1 365 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 IFT122Q9HBG6 1241 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 FAM217BQ9NTX9 383 aaPredicted RBP5.8□□□□□ -1.48
SPG11-208ENST00000558155 AGPAT5Q9NUQ2 364 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 MARCH5Q9NX47 278 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 SEPT9Q9UHD8 586 aaPredicted RBP5.8□□□□□ -1.48
SPG11-208ENST00000558155 SPTBN2O15020 2390 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 ACACBO00763 2458 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 MYH15Q9Y2K3 1946 aa5.8□□□□□ -1.48
SPG11-208ENST00000558155 CNTNAP5Q8WYK1 1306 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.79□□□□□ -1.48
SPG11-208ENST00000558155 SLC27A2O14975 620 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 MSH4O15457 936 aa5.79□□□□□ -1.48
SPG11-208ENST00000558155 DKC1O60832 514 aaKnown RBP eCLIP5.79□□□□□ -1.48
SPG11-208ENST00000558155 EFEMP2O95967 443 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms