RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 SMC4Q9NTJ3 1288 aa7.41□□□□□ -1.22
CLPX-202ENST00000558103 USP40Q9NVE5 1235 aa7.41□□□□□ -1.22
CLPX-202ENST00000558103 GNL3LQ9NVN8 582 aaKnown RBP7.41□□□□□ -1.22
CLPX-202ENST00000558103 PA2G4Q9UQ80 394 aaKnown RBP7.41□□□□□ -1.22
CLPX-202ENST00000558103 SLC45A1Q9Y2W3 748 aa7.41□□□□□ -1.22
CLPX-202ENST00000558103 AFG3L2Q9Y4W6 797 aa7.41□□□□□ -1.22
CLPX-202ENST00000558103 TIMM13Q9Y5L4 95 aaPredicted RBP7.41□□□□□ -1.22
CLPX-202ENST00000558103 LRRFIP2Q9Y608 721 aaKnown RBP7.41□□□□□ -1.22
CLPX-202ENST00000558103 EYSQ5T1H1 3165 aa7.41□□□□□ -1.22
CLPX-202ENST00000558103 UNC80Q8N2C7 3258 aa7.41□□□□□ -1.22
CLPX-202ENST00000558103 NPIPB6E9PJ23 425 aa7.4□□□□□ -1.22
CLPX-202ENST00000558103 N4BP3O15049 544 aa7.4□□□□□ -1.22
CLPX-202ENST00000558103 DLX3O60479 287 aa7.4□□□□□ -1.22
CLPX-202ENST00000558103 CT47B1P0C2W7 299 aaPredicted RBP7.4□□□□□ -1.22
CLPX-202ENST00000558103 CCL5P13501 91 aa7.4□□□□□ -1.22
CLPX-202ENST00000558103 LTBRP36941 435 aa7.4□□□□□ -1.22
CLPX-202ENST00000558103 PRR5P85299 388 aa7.4□□□□□ -1.22
CLPX-202ENST00000558103 KCNAB2Q13303 367 aa7.4□□□□□ -1.22
CLPX-202ENST00000558103 SERINC3Q13530 473 aa7.4□□□□□ -1.22
CLPX-202ENST00000558103 PLEKHN1Q494U1 663 aaPredicted RBP7.4□□□□□ -1.22
CLPX-202ENST00000558103 FASTKD5Q7L8L6 764 aaKnown RBP7.4□□□□□ -1.22
CLPX-202ENST00000558103 LRRC47Q8N1G4 583 aaKnown RBP7.4□□□□□ -1.22
CLPX-202ENST00000558103 NETO2Q8NC67 525 aa7.4□□□□□ -1.22
CLPX-202ENST00000558103 RCBTB1Q8NDN9 531 aa7.4□□□□□ -1.22
CLPX-202ENST00000558103 ZNF384Q8TF68 577 aa7.4□□□□□ -1.22
CLPX-202ENST00000558103 MZB1Q8WU39 189 aa7.4□□□□□ -1.22
CLPX-202ENST00000558103 U2AF1L4Q8WU68 220 aaKnown RBP7.4□□□□□ -1.22
CLPX-202ENST00000558103 UBXN4Q92575 508 aa7.4□□□□□ -1.22
CLPX-202ENST00000558103 TOX2Q96NM4 488 aa7.4□□□□□ -1.22
CLPX-202ENST00000558103 AARSD1Q9BTE6 412 aaKnown RBP7.4□□□□□ -1.22
CLPX-202ENST00000558103 ARHGEF4Q9NR80 690 aa7.4□□□□□ -1.22
CLPX-202ENST00000558103 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.4□□□□□ -1.22
CLPX-202ENST00000558103 GABRQQ9UN88 632 aa7.4□□□□□ -1.22
CLPX-202ENST00000558103 ZHX2Q9Y6X8 837 aa7.4□□□□□ -1.22
CLPX-202ENST00000558103 MROH7-TTC4A0A0A0MT08 1334 aa7.4□□□□□ -1.22
CLPX-202ENST00000558103 MYH8P13535 1937 aa7.39□□□□□ -1.23
CLPX-202ENST00000558103 A0A1B0GUL7 405 aa7.39□□□□□ -1.23
CLPX-202ENST00000558103 FGFR1P11362 822 aa7.39□□□□□ -1.23
CLPX-202ENST00000558103 BTDP43251 543 aa7.39□□□□□ -1.23
CLPX-202ENST00000558103 FLT3LGP49771 235 aa7.39□□□□□ -1.23
CLPX-202ENST00000558103 CDR1P51861 262 aa7.39□□□□□ -1.23
CLPX-202ENST00000558103 RHBDL3P58872 404 aa7.39□□□□□ -1.23
CLPX-202ENST00000558103 UBXN2AP68543 259 aa7.39□□□□□ -1.23
CLPX-202ENST00000558103 MTX1Q13505 466 aa7.39□□□□□ -1.23
CLPX-202ENST00000558103 LILRA6Q6PI73 481 aa7.39□□□□□ -1.23
CLPX-202ENST00000558103 SPATC1Q76KD6 591 aa7.39□□□□□ -1.23
CLPX-202ENST00000558103 DZIP1Q86YF9 867 aaKnown RBP7.39□□□□□ -1.23
CLPX-202ENST00000558103 PPIL6Q8IXY8 311 aa7.39□□□□□ -1.23
CLPX-202ENST00000558103 MEIS3Q99687 375 aa7.39□□□□□ -1.23
CLPX-202ENST00000558103 SPATA9Q9BWV2 254 aa7.39□□□□□ -1.23
CLPX-202ENST00000558103 MARCH2Q9P0N8 246 aa7.39□□□□□ -1.23
CLPX-202ENST00000558103 DBR1Q9UK59 544 aaKnown RBP7.39□□□□□ -1.23
CLPX-202ENST00000558103 NOB1Q9ULX3 412 aaKnown RBP7.39□□□□□ -1.23
CLPX-202ENST00000558103 NPFFR2Q9Y5X5 522 aa7.39□□□□□ -1.23
CLPX-202ENST00000558103 HCFC2Q9Y5Z7 792 aa7.39□□□□□ -1.23
CLPX-202ENST00000558103 NAV1Q8NEY1 1877 aa7.38□□□□□ -1.23
CLPX-202ENST00000558103 GPR75-ASB3A0A0A6YYF3 556 aa7.38□□□□□ -1.23
CLPX-202ENST00000558103 PRODHO43272 600 aa7.38□□□□□ -1.23
CLPX-202ENST00000558103 CTNND1O60716 968 aaKnown RBP7.38□□□□□ -1.23
CLPX-202ENST00000558103 SGPL1O95470 568 aa7.38□□□□□ -1.23
CLPX-202ENST00000558103 NTRK1P04629 796 aa7.38□□□□□ -1.23
CLPX-202ENST00000558103 CFPP27918 469 aa7.38□□□□□ -1.23
CLPX-202ENST00000558103 BUD31P41223 144 aaPredicted RBP7.38□□□□□ -1.23
CLPX-202ENST00000558103 EPHB3P54753 998 aa7.38□□□□□ -1.23
CLPX-202ENST00000558103 TIMM10P62072 90 aa7.38□□□□□ -1.23
CLPX-202ENST00000558103 RPL11P62913 178 aaKnown RBP7.38□□□□□ -1.23
CLPX-202ENST00000558103 MECOMQ03112 1051 aa7.38□□□□□ -1.23
CLPX-202ENST00000558103 PICALMQ13492 652 aa7.38□□□□□ -1.23
CLPX-202ENST00000558103 FAM110CQ1W6H9 321 aa7.38□□□□□ -1.23
CLPX-202ENST00000558103 MTERF2Q49AM1 385 aa7.38□□□□□ -1.23
CLPX-202ENST00000558103 NSMFQ6X4W1 530 aa7.38□□□□□ -1.23
CLPX-202ENST00000558103 GADL1Q6ZQY3 521 aa7.38□□□□□ -1.23
CLPX-202ENST00000558103 CEP68Q76N32 757 aa7.38□□□□□ -1.23
CLPX-202ENST00000558103 OSBP2Q969R2 916 aa7.38□□□□□ -1.23
CLPX-202ENST00000558103 NSUN4Q96CB9 384 aaKnown RBP7.38□□□□□ -1.23
CLPX-202ENST00000558103 PEX11GQ96HA9 241 aa7.38□□□□□ -1.23
CLPX-202ENST00000558103 HTATIP2Q9BUP3 242 aa7.38□□□□□ -1.23
CLPX-202ENST00000558103 API5Q9BZZ5 524 aaKnown RBP7.38□□□□□ -1.23
CLPX-202ENST00000558103 ABCF2Q9UG63 623 aa7.38□□□□□ -1.23
CLPX-202ENST00000558103 NUDT5Q9UKK9 219 aa7.38□□□□□ -1.23
CLPX-202ENST00000558103 CNOT6Q9ULM6 557 aaKnown RBP7.38□□□□□ -1.23
CLPX-202ENST00000558103 AGTPBP1Q9UPW5 1226 aa7.38□□□□□ -1.23
CLPX-202ENST00000558103 PCDHA5Q9Y5H7 936 aa7.38□□□□□ -1.23
CLPX-202ENST00000558103 PARP14Q460N5 1801 aa7.38□□□□□ -1.23
CLPX-202ENST00000558103 A0A0C4DFX4 3053 aa7.38□□□□□ -1.23
CLPX-202ENST00000558103 CDH23Q9H251 3354 aa7.37□□□□□ -1.23
CLPX-202ENST00000558103 TRAV20A0A0B4J274 112 aa7.37□□□□□ -1.23
CLPX-202ENST00000558103 TRIM75PA6NK02 468 aa7.37□□□□□ -1.23
CLPX-202ENST00000558103 B8ZZF3 427 aa7.37□□□□□ -1.23
CLPX-202ENST00000558103 C22orf46C9J442 243 aa7.37□□□□□ -1.23
CLPX-202ENST00000558103 TNPO2O14787 897 aaKnown RBP7.37□□□□□ -1.23
CLPX-202ENST00000558103 ADCY3O60266 1144 aa7.37□□□□□ -1.23
CLPX-202ENST00000558103 PABPC1P11940 636 aaKnown RBP7.37□□□□□ -1.23
CLPX-202ENST00000558103 LCP1P13796 627 aa7.37□□□□□ -1.23
CLPX-202ENST00000558103 BCL6P41182 706 aa7.37□□□□□ -1.23
CLPX-202ENST00000558103 LINC00310P59036 64 aa7.37□□□□□ -1.23
CLPX-202ENST00000558103 TFCP2Q12800 502 aa7.37□□□□□ -1.23
CLPX-202ENST00000558103 MVPQ14764 893 aaKnown RBP7.37□□□□□ -1.23
CLPX-202ENST00000558103 TREML2Q5T2D2 321 aa7.37□□□□□ -1.23
CLPX-202ENST00000558103 SPTY2D1Q68D10 685 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms