RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 PAK2Q13177 524 aa13.53□□□□□ -0.24
TPM1-209ENST00000558072 KCNJ12Q14500 433 aa13.53□□□□□ -0.24
TPM1-209ENST00000558072 ZNF568Q3ZCX4 644 aa13.53□□□□□ -0.24
TPM1-209ENST00000558072 TCP11X2Q5H9J9 407 aa13.53□□□□□ -0.24
TPM1-209ENST00000558072 CDKAL1Q5VV42 579 aa13.53□□□□□ -0.24
TPM1-209ENST00000558072 CEP135Q66GS9 1140 aa13.53□□□□□ -0.24
TPM1-209ENST00000558072 SLC27A1Q6PCB7 646 aa13.53□□□□□ -0.24
TPM1-209ENST00000558072 TRAF7Q6Q0C0 670 aa13.53□□□□□ -0.24
TPM1-209ENST00000558072 SARM1Q6SZW1 724 aa13.53□□□□□ -0.24
TPM1-209ENST00000558072 LRRC8DQ7L1W4 858 aa13.53□□□□□ -0.24
TPM1-209ENST00000558072 TAS1R3Q7RTX0 852 aa13.53□□□□□ -0.24
TPM1-209ENST00000558072 APBB2Q92870 758 aa13.53□□□□□ -0.24
TPM1-209ENST00000558072 TRIM43Q96BQ3 446 aaPredicted RBP13.53□□□□□ -0.24
TPM1-209ENST00000558072 TARS2Q9BW92 718 aaKnown RBP13.53□□□□□ -0.24
TPM1-209ENST00000558072 TRIM6Q9C030 488 aaPredicted RBP13.53□□□□□ -0.24
TPM1-209ENST00000558072 AGPAT5Q9NUQ2 364 aa13.53□□□□□ -0.24
TPM1-209ENST00000558072 HSPBP1Q9NZL4 362 aa13.53□□□□□ -0.24
TPM1-209ENST00000558072 LIMA1Q9UHB6 759 aaKnown RBP13.53□□□□□ -0.24
TPM1-209ENST00000558072 ZMYM2Q9UBW7 1377 aa13.53□□□□□ -0.24
TPM1-209ENST00000558072 CLIC2O15247 247 aa13.52□□□□□ -0.25
TPM1-209ENST00000558072 TSPAN1O60635 241 aa13.52□□□□□ -0.25
TPM1-209ENST00000558072 CHRNA1P02708 482 aa13.52□□□□□ -0.25
TPM1-209ENST00000558072 CLTBP09497 229 aa13.52□□□□□ -0.25
TPM1-209ENST00000558072 PROZP22891 400 aa13.52□□□□□ -0.25
TPM1-209ENST00000558072 CYP2C18P33260 490 aa13.52□□□□□ -0.25
TPM1-209ENST00000558072 RAB27AP51159 221 aa13.52□□□□□ -0.25
TPM1-209ENST00000558072 CYP2J2P51589 502 aa13.52□□□□□ -0.25
TPM1-209ENST00000558072 AP3M2P53677 418 aa13.52□□□□□ -0.25
TPM1-209ENST00000558072 PMS1P54277 932 aaKnown RBP13.52□□□□□ -0.25
TPM1-209ENST00000558072 CCL23P55773 120 aa13.52□□□□□ -0.25
TPM1-209ENST00000558072 CETN1Q12798 172 aa13.52□□□□□ -0.25
TPM1-209ENST00000558072 AMHR2Q16671 573 aa13.52□□□□□ -0.25
TPM1-209ENST00000558072 TCTN1Q2MV58 587 aa13.52□□□□□ -0.25
TPM1-209ENST00000558072 FBXO47Q5MNV8 452 aa13.52□□□□□ -0.25
TPM1-209ENST00000558072 ZNF618Q5T7W0 954 aa13.52□□□□□ -0.25
TPM1-209ENST00000558072 LRRC55Q6ZSA7 311 aa13.52□□□□□ -0.25
TPM1-209ENST00000558072 CD302Q8IX05 232 aa13.52□□□□□ -0.25
TPM1-209ENST00000558072 FAM186BQ8IYM0 893 aa13.52□□□□□ -0.25
TPM1-209ENST00000558072 TMEM40Q8WWA1 233 aa13.52□□□□□ -0.25
TPM1-209ENST00000558072 RSPH1Q8WYR4 309 aa13.52□□□□□ -0.25
TPM1-209ENST00000558072 SCLYQ96I15 445 aa13.52□□□□□ -0.25
TPM1-209ENST00000558072 CNOT6LQ96LI5 555 aaKnown RBP13.52□□□□□ -0.25
TPM1-209ENST00000558072 FBXL18Q96ME1 805 aa13.52□□□□□ -0.25
TPM1-209ENST00000558072 HTATIP2Q9BUP3 242 aa13.52□□□□□ -0.25
TPM1-209ENST00000558072 CCDC94Q9BW85 323 aaPredicted RBP13.52□□□□□ -0.25
TPM1-209ENST00000558072 WNT8AQ9H1J5 351 aa13.52□□□□□ -0.25
TPM1-209ENST00000558072 PRKAG2Q9UGJ0 569 aa13.52□□□□□ -0.25
TPM1-209ENST00000558072 ZMYND8Q9ULU4 1186 aaPredicted RBP13.52□□□□□ -0.25
TPM1-209ENST00000558072 DNAH12Q6ZR08 3092 aa13.52□□□□□ -0.25
TPM1-209ENST00000558072 N4BP1O75113 896 aaKnown RBP13.51□□□□□ -0.25
TPM1-209ENST00000558072 IL18RAPO95256 599 aa13.51□□□□□ -0.25
TPM1-209ENST00000558072 CLTAP09496 248 aa13.51□□□□□ -0.25
TPM1-209ENST00000558072 ARF4P18085 180 aaPredicted RBP13.51□□□□□ -0.25
TPM1-209ENST00000558072 GTF2H1P32780 548 aa13.51□□□□□ -0.25
TPM1-209ENST00000558072 YARSP54577 528 aaKnown RBP13.51□□□□□ -0.25
TPM1-209ENST00000558072 PLCB2Q00722 1185 aa13.51□□□□□ -0.25
TPM1-209ENST00000558072 MBTPS1Q14703 1052 aa13.51□□□□□ -0.25
TPM1-209ENST00000558072 SNRNP35Q16560 246 aaKnown RBP13.51□□□□□ -0.25
TPM1-209ENST00000558072 MAN2A1Q16706 1144 aa13.51□□□□□ -0.25
TPM1-209ENST00000558072 FKBP15Q5T1M5 1219 aa13.51□□□□□ -0.25
TPM1-209ENST00000558072 CREBRFQ8IUR6 639 aa13.51□□□□□ -0.25
TPM1-209ENST00000558072 TMC2Q8TDI7 906 aa13.51□□□□□ -0.25
TPM1-209ENST00000558072 NOC4LQ9BVI4 516 aaKnown RBP13.51□□□□□ -0.25
TPM1-209ENST00000558072 TRAIPQ9BWF2 469 aa13.51□□□□□ -0.25
TPM1-209ENST00000558072 HIPK3Q9H422 1215 aa13.51□□□□□ -0.25
TPM1-209ENST00000558072 MINDY3Q9H8M7 445 aa13.51□□□□□ -0.25
TPM1-209ENST00000558072 PTPRHQ9HD43 1115 aa13.51□□□□□ -0.25
TPM1-209ENST00000558072 TOPORSQ9NS56 1045 aaPredicted RBP13.51□□□□□ -0.25
TPM1-209ENST00000558072 SAMSN1Q9NSI8 373 aaKnown RBP13.51□□□□□ -0.25
TPM1-209ENST00000558072 TMEM39AQ9NV64 488 aa13.51□□□□□ -0.25
TPM1-209ENST00000558072 ANKFY1Q9P2R3 1169 aa13.51□□□□□ -0.25
TPM1-209ENST00000558072 TBX21Q9UL17 535 aa13.51□□□□□ -0.25
TPM1-209ENST00000558072 ST3GAL5Q9UNP4 418 aa13.51□□□□□ -0.25
TPM1-209ENST00000558072 PIN4Q9Y237 131 aaKnown RBP13.51□□□□□ -0.25
TPM1-209ENST00000558072 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.51□□□□□ -0.25
TPM1-209ENST00000558072 TTLL13PA6NNM8 815 aa13.5□□□□□ -0.25
TPM1-209ENST00000558072 GOLGA6L6A8MZA4 724 aa13.5□□□□□ -0.25
TPM1-209ENST00000558072 ANKRD63C9JTQ0 380 aa13.5□□□□□ -0.25
TPM1-209ENST00000558072 PFKMP08237 780 aa13.5□□□□□ -0.25
TPM1-209ENST00000558072 ADSSP30520 456 aa13.5□□□□□ -0.25
TPM1-209ENST00000558072 UBASH3AP57075 661 aa13.5□□□□□ -0.25
TPM1-209ENST00000558072 FANCCQ00597 558 aa13.5□□□□□ -0.25
TPM1-209ENST00000558072 NFX1Q12986 1120 aaKnown RBP13.5□□□□□ -0.25
TPM1-209ENST00000558072 NT5DC4Q86YG4 428 aa13.5□□□□□ -0.25
TPM1-209ENST00000558072 SEPT8Q92599 483 aa13.5□□□□□ -0.25
TPM1-209ENST00000558072 PGBD4Q96DM1 585 aa13.5□□□□□ -0.25
TPM1-209ENST00000558072 IQCDQ96DY2 449 aa13.5□□□□□ -0.25
TPM1-209ENST00000558072 MED15Q96RN5 788 aa13.5□□□□□ -0.25
TPM1-209ENST00000558072 FNBP1Q96RU3 617 aa13.5□□□□□ -0.25
TPM1-209ENST00000558072 CBWD1Q9BRT8 395 aa13.5□□□□□ -0.25
TPM1-209ENST00000558072 TUBGCP2Q9BSJ2 902 aa13.5□□□□□ -0.25
TPM1-209ENST00000558072 TRIM5Q9C035 493 aa13.5□□□□□ -0.25
TPM1-209ENST00000558072 PDZD7Q9H5P4 517 aa13.5□□□□□ -0.25
TPM1-209ENST00000558072 RPF1Q9H9Y2 349 aaKnown RBP13.5□□□□□ -0.25
TPM1-209ENST00000558072 PLEKHA5Q9HAU0 1116 aa13.5□□□□□ -0.25
TPM1-209ENST00000558072 UBN1Q9NPG3 1134 aa13.5□□□□□ -0.25
TPM1-209ENST00000558072 C1orf112Q9NSG2 853 aa13.5□□□□□ -0.25
TPM1-209ENST00000558072 NOC2LQ9Y3T9 749 aaKnown RBP13.5□□□□□ -0.25
TPM1-209ENST00000558072 P4HA2O15460 535 aa13.49□□□□□ -0.25
TPM1-209ENST00000558072 EFCAB14O75071 495 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms