RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 PIGRP01833 764 aa18.34■□□□□ 0.53
PBX4-202ENST00000557978 MCF2P10911 925 aa18.34■□□□□ 0.53
PBX4-202ENST00000557978 PROZP22891 400 aa18.34■□□□□ 0.53
PBX4-202ENST00000557978 LIG4P49917 911 aa18.34■□□□□ 0.53
PBX4-202ENST00000557978 GATMP50440 423 aa18.34■□□□□ 0.53
PBX4-202ENST00000557978 ZNF568Q3ZCX4 644 aa18.34■□□□□ 0.53
PBX4-202ENST00000557978 ZC2HC1CQ53FD0 456 aaPredicted RBP18.34■□□□□ 0.53
PBX4-202ENST00000557978 SPOUT1Q5T280 376 aaKnown RBP18.34■□□□□ 0.53
PBX4-202ENST00000557978 EEF1DP3Q658K8 133 aa18.34■□□□□ 0.53
PBX4-202ENST00000557978 GRAMD1CQ8IYS0 662 aa18.34■□□□□ 0.53
PBX4-202ENST00000557978 LRRC43Q8N309 656 aa18.34■□□□□ 0.53
PBX4-202ENST00000557978 ENGASEQ8NFI3 743 aa18.34■□□□□ 0.53
PBX4-202ENST00000557978 URGCPQ8TCY9 931 aa18.34■□□□□ 0.53
PBX4-202ENST00000557978 CCDC47Q96A33 483 aaKnown RBP18.34■□□□□ 0.53
PBX4-202ENST00000557978 TIGD1Q96MW7 591 aa18.34■□□□□ 0.53
PBX4-202ENST00000557978 STRA6Q9BX79 667 aa18.34■□□□□ 0.53
PBX4-202ENST00000557978 NXF3Q9H4D5 531 aaKnown RBP18.34■□□□□ 0.53
PBX4-202ENST00000557978 AAASQ9NRG9 546 aa18.34■□□□□ 0.53
PBX4-202ENST00000557978 HES2Q9Y543 173 aa18.34■□□□□ 0.53
PBX4-202ENST00000557978 COL4A4P53420 1690 aaPredicted RBP18.33■□□□□ 0.53
PBX4-202ENST00000557978 CARNS1A5YM72 827 aa18.33■□□□□ 0.53
PBX4-202ENST00000557978 OFD1O75665 1012 aa18.33■□□□□ 0.53
PBX4-202ENST00000557978 PPP1R37O75864 691 aa18.33■□□□□ 0.53
PBX4-202ENST00000557978 ARHGEF15O94989 841 aa18.33■□□□□ 0.53
PBX4-202ENST00000557978 CASP1P29466 404 aa18.33■□□□□ 0.53
PBX4-202ENST00000557978 MATR3P43243 847 aaKnown RBP eCLIP18.33■□□□□ 0.53
PBX4-202ENST00000557978 UBE2HP62256 183 aa18.33■□□□□ 0.53
PBX4-202ENST00000557978 SNW1Q13573 536 aaKnown RBP18.33■□□□□ 0.53
PBX4-202ENST00000557978 NOLC1Q14978 699 aaKnown RBP eCLIP18.33■□□□□ 0.53
PBX4-202ENST00000557978 FAM26FQ5R3K3 315 aa18.33■□□□□ 0.53
PBX4-202ENST00000557978 Q7L0L9 218 aa18.33■□□□□ 0.53
PBX4-202ENST00000557978 ARNTL2Q8WYA1 636 aa18.33■□□□□ 0.53
PBX4-202ENST00000557978 FAM161BQ96MY7 647 aa18.33■□□□□ 0.53
PBX4-202ENST00000557978 GBP4Q96PP9 640 aa18.33■□□□□ 0.53
PBX4-202ENST00000557978 ACCSQ96QU6 501 aa18.33■□□□□ 0.53
PBX4-202ENST00000557978 APOL6Q9BWW8 343 aa18.33■□□□□ 0.53
PBX4-202ENST00000557978 TMEM206Q9H813 350 aa18.33■□□□□ 0.53
PBX4-202ENST00000557978 TYW1Q9NV66 732 aaKnown RBP18.33■□□□□ 0.53
PBX4-202ENST00000557978 PARP2Q9UGN5 583 aa18.33■□□□□ 0.53
PBX4-202ENST00000557978 HOOK1Q9UJC3 728 aaKnown RBP18.33■□□□□ 0.53
PBX4-202ENST00000557978 MEIS3P2A8K0S8 358 aa18.32■□□□□ 0.52
PBX4-202ENST00000557978 RB1P06400 928 aa18.32■□□□□ 0.52
PBX4-202ENST00000557978 RNASELQ05823 741 aaKnown RBP18.32■□□□□ 0.52
PBX4-202ENST00000557978 EHHADHQ08426 723 aa18.32■□□□□ 0.52
PBX4-202ENST00000557978 PSMD2Q13200 908 aa18.32■□□□□ 0.52
PBX4-202ENST00000557978 NOMO2Q5JPE7 1267 aa18.32■□□□□ 0.52
PBX4-202ENST00000557978 L1TD1Q5T7N2 865 aaKnown RBP18.32■□□□□ 0.52
PBX4-202ENST00000557978 TMEM192Q8IY95 271 aa18.32■□□□□ 0.52
PBX4-202ENST00000557978 C17orf80Q9BSJ5 609 aa18.32■□□□□ 0.52
PBX4-202ENST00000557978 CCDC94Q9BW85 323 aaPredicted RBP18.32■□□□□ 0.52
PBX4-202ENST00000557978 CDT1Q9H211 546 aa18.32■□□□□ 0.52
PBX4-202ENST00000557978 RNF39Q9H2S5 420 aa18.32■□□□□ 0.52
PBX4-202ENST00000557978 CERS4Q9HA82 394 aa18.32■□□□□ 0.52
PBX4-202ENST00000557978 ANKFY1Q9P2R3 1169 aa18.32■□□□□ 0.52
PBX4-202ENST00000557978 INPP5FQ9Y2H2 1132 aa18.32■□□□□ 0.52
PBX4-202ENST00000557978 MRPL42Q9Y6G3 142 aaKnown RBP18.32■□□□□ 0.52
PBX4-202ENST00000557978 GADD45BO75293 160 aaPredicted RBP18.32■□□□□ 0.52
PBX4-202ENST00000557978 PRPF40AO75400 957 aaKnown RBP18.32■□□□□ 0.52
PBX4-202ENST00000557978 AKAP5P24588 427 aa18.32■□□□□ 0.52
PBX4-202ENST00000557978 BMPR1AP36894 532 aa18.32■□□□□ 0.52
PBX4-202ENST00000557978 MCL1Q07820 350 aa18.32■□□□□ 0.52
PBX4-202ENST00000557978 GRIN2CQ14957 1233 aa18.32■□□□□ 0.52
PBX4-202ENST00000557978 EPC2Q52LR7 807 aa18.32■□□□□ 0.52
PBX4-202ENST00000557978 SLFN12LQ6IEE8 588 aa18.32■□□□□ 0.52
PBX4-202ENST00000557978 ZBTB33Q86T24 672 aa18.32■□□□□ 0.52
PBX4-202ENST00000557978 SYCP3Q8IZU3 236 aa18.32■□□□□ 0.52
PBX4-202ENST00000557978 FBXO22Q8NEZ5 403 aa18.32■□□□□ 0.52
PBX4-202ENST00000557978 ZBTB45Q96K62 511 aaPredicted RBP18.32■□□□□ 0.52
PBX4-202ENST00000557978 PLVAPQ9BX97 442 aa18.32■□□□□ 0.52
PBX4-202ENST00000557978 TOPORSQ9NS56 1045 aaPredicted RBP18.32■□□□□ 0.52
PBX4-202ENST00000557978 EXOC1Q9NV70 894 aa18.32■□□□□ 0.52
PBX4-202ENST00000557978 MTMR10Q9NXD2 777 aa18.32■□□□□ 0.52
PBX4-202ENST00000557978 SNTG2Q9NY99 539 aa18.32■□□□□ 0.52
PBX4-202ENST00000557978 MTUS1Q9ULD2 1270 aa18.32■□□□□ 0.52
PBX4-202ENST00000557978 PCDHB12Q9Y5F1 795 aa18.32■□□□□ 0.52
PBX4-202ENST00000557978 ARL5CA6NH57 179 aa18.31■□□□□ 0.52
PBX4-202ENST00000557978 C5orf67F2Z3F1 127 aa18.31■□□□□ 0.52
PBX4-202ENST00000557978 ABLIM1O14639 778 aa18.31■□□□□ 0.52
PBX4-202ENST00000557978 INPPL1O15357 1258 aa18.31■□□□□ 0.52
PBX4-202ENST00000557978 EIF3DO15371 548 aaKnown RBP eCLIP18.31■□□□□ 0.52
PBX4-202ENST00000557978 KLRC4O43908 158 aa18.31■□□□□ 0.52
PBX4-202ENST00000557978 KINO60870 393 aaKnown RBP18.31■□□□□ 0.52
PBX4-202ENST00000557978 NR1I2O75469 434 aa18.31■□□□□ 0.52
PBX4-202ENST00000557978 MYBP10242 640 aa18.31■□□□□ 0.52
PBX4-202ENST00000557978 LAG3P18627 525 aa18.31■□□□□ 0.52
PBX4-202ENST00000557978 CTNNB1P35222 781 aa18.31■□□□□ 0.52
PBX4-202ENST00000557978 MLH1P40692 756 aa18.31■□□□□ 0.52
PBX4-202ENST00000557978 GRM5P41594 1212 aa18.31■□□□□ 0.52
PBX4-202ENST00000557978 CASP5P51878 434 aa18.31■□□□□ 0.52
PBX4-202ENST00000557978 YARSP54577 528 aaKnown RBP18.31■□□□□ 0.52
PBX4-202ENST00000557978 POSTNQ15063 836 aa18.31■□□□□ 0.52
PBX4-202ENST00000557978 KYAT1Q16773 422 aa18.31■□□□□ 0.52
PBX4-202ENST00000557978 P2RX5Q93086 422 aa18.31■□□□□ 0.52
PBX4-202ENST00000557978 FAM193BQ96PV7 902 aaPredicted RBP18.31■□□□□ 0.52
PBX4-202ENST00000557978 RPS6KC1Q96S38 1066 aa18.31■□□□□ 0.52
PBX4-202ENST00000557978 GAD1Q99259 594 aa18.31■□□□□ 0.52
PBX4-202ENST00000557978 GAS2L1Q99501 681 aaPredicted RBP18.31■□□□□ 0.52
PBX4-202ENST00000557978 CWH43Q9H720 699 aa18.31■□□□□ 0.52
PBX4-202ENST00000557978 TBC1D13Q9NVG8 400 aa18.31■□□□□ 0.52
PBX4-202ENST00000557978 MYO7AQ13402 2215 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms