RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 MCL1Q07820 350 aa23.25■■□□□ 1.31
CASC4-204ENST00000557945 RASIP1Q5U651 963 aa23.25■■□□□ 1.31
CASC4-204ENST00000557945 ARMCX5Q6P1M9 558 aa23.25■■□□□ 1.31
CASC4-204ENST00000557945 PGBD4Q96DM1 585 aa23.25■■□□□ 1.31
CASC4-204ENST00000557945 SLC9A7Q96T83 725 aa23.25■■□□□ 1.31
CASC4-204ENST00000557945 MSTO1Q9BUK6 570 aa23.25■■□□□ 1.31
CASC4-204ENST00000557945 TMEM161AQ9NX61 479 aa23.25■■□□□ 1.31
CASC4-204ENST00000557945 A0A0B4J269 797 aa23.24■■□□□ 1.31
CASC4-204ENST00000557945 TGFB1I1O43294 461 aa23.24■■□□□ 1.31
CASC4-204ENST00000557945 ZNF623O75123 536 aa23.24■■□□□ 1.31
CASC4-204ENST00000557945 ITGA4P13612 1032 aa23.24■■□□□ 1.31
CASC4-204ENST00000557945 OSTNP61366 133 aa23.24■■□□□ 1.31
CASC4-204ENST00000557945 RBM43Q6ZSC3 357 aaKnown RBP23.24■■□□□ 1.31
CASC4-204ENST00000557945 THNSL1Q8IYQ7 743 aa23.24■■□□□ 1.31
CASC4-204ENST00000557945 TDHQ8IZJ6 230 aa23.24■■□□□ 1.31
CASC4-204ENST00000557945 ADSSL1Q8N142 457 aa23.24■■□□□ 1.31
CASC4-204ENST00000557945 SMG8Q8ND04 991 aaKnown RBP23.24■■□□□ 1.31
CASC4-204ENST00000557945 LPPQ93052 612 aa23.24■■□□□ 1.31
CASC4-204ENST00000557945 TOP1MTQ969P6 601 aa23.24■■□□□ 1.31
CASC4-204ENST00000557945 HAPLN2Q9GZV7 340 aa23.24■■□□□ 1.31
CASC4-204ENST00000557945 ELAC1Q9H777 363 aaKnown RBP23.24■■□□□ 1.31
CASC4-204ENST00000557945 AGPAT3Q9NRZ7 376 aa23.24■■□□□ 1.31
CASC4-204ENST00000557945 STYXL1Q9Y6J8 313 aa23.24■■□□□ 1.31
CASC4-204ENST00000557945 CLIC2O15247 247 aa23.23■■□□□ 1.31
CASC4-204ENST00000557945 EOMESO95936 686 aa23.23■■□□□ 1.31
CASC4-204ENST00000557945 ATF7P17544 494 aaPredicted RBP23.23■■□□□ 1.31
CASC4-204ENST00000557945 ADSSP30520 456 aa23.23■■□□□ 1.31
CASC4-204ENST00000557945 COBLL1Q53SF7 1204 aa23.23■■□□□ 1.31
CASC4-204ENST00000557945 PRPF38BQ5VTL8 546 aaKnown RBP23.23■■□□□ 1.31
CASC4-204ENST00000557945 KLHL10Q6JEL2 608 aa23.23■■□□□ 1.31
CASC4-204ENST00000557945 SASS6Q6UVJ0 657 aa23.23■■□□□ 1.31
CASC4-204ENST00000557945 MRPL10Q7Z7H8 261 aaKnown RBP23.23■■□□□ 1.31
CASC4-204ENST00000557945 ZNF598Q86UK7 904 aaKnown RBP23.23■■□□□ 1.31
CASC4-204ENST00000557945 CEP120Q8N960 986 aa23.23■■□□□ 1.31
CASC4-204ENST00000557945 GOLGA5Q8TBA6 731 aa23.23■■□□□ 1.31
CASC4-204ENST00000557945 PHOSPHO2Q8TCD6 241 aa23.23■■□□□ 1.31
CASC4-204ENST00000557945 CBWD1Q9BRT8 395 aa23.23■■□□□ 1.31
CASC4-204ENST00000557945 ZBED2Q9BTP6 218 aa23.23■■□□□ 1.31
CASC4-204ENST00000557945 KCTD10Q9H3F6 313 aa23.23■■□□□ 1.31
CASC4-204ENST00000557945 PCIF1Q9H4Z3 704 aa23.23■■□□□ 1.31
CASC4-204ENST00000557945 TYW1Q9NV66 732 aaKnown RBP23.23■■□□□ 1.31
CASC4-204ENST00000557945 SNTG2Q9NY99 539 aa23.23■■□□□ 1.31
CASC4-204ENST00000557945 PARP2Q9UGN5 583 aa23.23■■□□□ 1.31
CASC4-204ENST00000557945 TTC3P53804 2025 aa23.22■■□□□ 1.31
CASC4-204ENST00000557945 PSMA7O14818 248 aa23.22■■□□□ 1.31
CASC4-204ENST00000557945 FGFR1P11362 822 aa23.22■■□□□ 1.31
CASC4-204ENST00000557945 CD44P16070 742 aaKnown RBP23.22■■□□□ 1.31
CASC4-204ENST00000557945 GARTP22102 1010 aa23.22■■□□□ 1.31
CASC4-204ENST00000557945 AKAP5P24588 427 aa23.22■■□□□ 1.31
CASC4-204ENST00000557945 PPP1R2P41236 205 aa23.22■■□□□ 1.31
CASC4-204ENST00000557945 SNRPFP62306 86 aaKnown RBP23.22■■□□□ 1.31
CASC4-204ENST00000557945 SEZ6Q53EL9 994 aa23.22■■□□□ 1.31
CASC4-204ENST00000557945 NOC3LQ8WTT2 800 aaKnown RBP23.22■■□□□ 1.31
CASC4-204ENST00000557945 CCDC94Q9BW85 323 aaPredicted RBP23.22■■□□□ 1.31
CASC4-204ENST00000557945 RNF39Q9H2S5 420 aa23.22■■□□□ 1.31
CASC4-204ENST00000557945 PRO3102Q9H379 93 aa23.22■■□□□ 1.31
CASC4-204ENST00000557945 AGO2Q9UKV8 859 aaKnown RBP23.22■■□□□ 1.31
CASC4-204ENST00000557945 MEIS3P2A8K0S8 358 aa23.21■■□□□ 1.31
CASC4-204ENST00000557945 OGTO15294 1046 aa23.21■■□□□ 1.31
CASC4-204ENST00000557945 CALUO43852 315 aaPredicted RBP23.21■■□□□ 1.31
CASC4-204ENST00000557945 GRM5P41594 1212 aa23.21■■□□□ 1.31
CASC4-204ENST00000557945 CYP2J2P51589 502 aa23.21■■□□□ 1.31
CASC4-204ENST00000557945 NLRP12P59046 1061 aa23.21■■□□□ 1.31
CASC4-204ENST00000557945 HERC6Q8IVU3 1022 aa23.21■■□□□ 1.31
CASC4-204ENST00000557945 SAAL1Q96ER3 474 aa23.21■■□□□ 1.31
CASC4-204ENST00000557945 CGNQ9P2M7 1197 aaKnown RBP23.21■■□□□ 1.31
CASC4-204ENST00000557945 PPP1R3GB7ZBB8 358 aa23.2■■□□□ 1.3
CASC4-204ENST00000557945 PDXKO00764 312 aa23.2■■□□□ 1.3
CASC4-204ENST00000557945 AGMOQ6ZNB7 445 aa23.2■■□□□ 1.3
CASC4-204ENST00000557945 ABI1Q8IZP0 508 aa23.2■■□□□ 1.3
CASC4-204ENST00000557945 CRIPAKQ8N1N5 446 aa23.2■■□□□ 1.3
CASC4-204ENST00000557945 MLKLQ8NB16 471 aa23.2■■□□□ 1.3
CASC4-204ENST00000557945 DHTKD1Q96HY7 919 aaPredicted RBP23.2■■□□□ 1.3
CASC4-204ENST00000557945 TSG101Q99816 390 aa23.2■■□□□ 1.3
CASC4-204ENST00000557945 SEMA6BQ9H3T3 888 aa23.2■■□□□ 1.3
CASC4-204ENST00000557945 RSAD1Q9HA92 442 aa23.2■■□□□ 1.3
CASC4-204ENST00000557945 COLQQ9Y215 455 aaPredicted RBP23.2■■□□□ 1.3
CASC4-204ENST00000557945 GOLGA8IPA6NC78 632 aa23.19■■□□□ 1.3
CASC4-204ENST00000557945 GOLGA8JA6NMD2 632 aa23.19■■□□□ 1.3
CASC4-204ENST00000557945 GRXCR1A8MXD5 290 aa23.19■■□□□ 1.3
CASC4-204ENST00000557945 TULP1O00294 542 aaPredicted RBP23.19■■□□□ 1.3
CASC4-204ENST00000557945 HOXA2O43364 376 aa23.19■■□□□ 1.3
CASC4-204ENST00000557945 RECQL4O94761 1208 aa23.19■■□□□ 1.3
CASC4-204ENST00000557945 LETM1O95202 739 aaPredicted RBP23.19■■□□□ 1.3
CASC4-204ENST00000557945 GJB5O95377 273 aa23.19■■□□□ 1.3
CASC4-204ENST00000557945 ACOT2P49753 483 aa23.19■■□□□ 1.3
CASC4-204ENST00000557945 YARSP54577 528 aaKnown RBP23.19■■□□□ 1.3
CASC4-204ENST00000557945 KYAT1Q16773 422 aa23.19■■□□□ 1.3
CASC4-204ENST00000557945 DPCR1Q3MIW9 517 aa23.19■■□□□ 1.3
CASC4-204ENST00000557945 ZBTB41Q5SVQ8 909 aa23.19■■□□□ 1.3
CASC4-204ENST00000557945 GLB1LQ6UWU2 654 aa23.19■■□□□ 1.3
CASC4-204ENST00000557945 TMEM192Q8IY95 271 aa23.19■■□□□ 1.3
CASC4-204ENST00000557945 NELFBQ8WX92 580 aa23.19■■□□□ 1.3
CASC4-204ENST00000557945 P2RX5Q93086 422 aa23.19■■□□□ 1.3
CASC4-204ENST00000557945 ACAP3Q96P50 834 aa23.19■■□□□ 1.3
CASC4-204ENST00000557945 YME1L1Q96TA2 773 aa23.19■■□□□ 1.3
CASC4-204ENST00000557945 FAM213AQ9BRX8 229 aa23.19■■□□□ 1.3
CASC4-204ENST00000557945 UBN1Q9NPG3 1134 aa23.19■■□□□ 1.3
CASC4-204ENST00000557945 HSPBP1Q9NZL4 362 aa23.19■■□□□ 1.3
CASC4-204ENST00000557945 KLK14Q9P0G3 267 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms