RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 MAP4K3Q8IVH8 894 aa15.72■□□□□ 0.11
USP3-205ENST00000557884 HACE1Q8IYU2 909 aa15.72■□□□□ 0.11
USP3-205ENST00000557884 ENGASEQ8NFI3 743 aa15.72■□□□□ 0.11
USP3-205ENST00000557884 TGS1Q96RS0 853 aaKnown RBP15.72■□□□□ 0.11
USP3-205ENST00000557884 CDT1Q9H211 546 aa15.72■□□□□ 0.11
USP3-205ENST00000557884 ST6GALNAC4Q9H4F1 302 aa15.72■□□□□ 0.11
USP3-205ENST00000557884 PTPRHQ9HD43 1115 aa15.72■□□□□ 0.11
USP3-205ENST00000557884 OLFML3Q9NRN5 406 aa15.72■□□□□ 0.11
USP3-205ENST00000557884 KLK14Q9P0G3 267 aa15.72■□□□□ 0.11
USP3-205ENST00000557884 PARP2Q9UGN5 583 aa15.72■□□□□ 0.11
USP3-205ENST00000557884 GDAQ9Y2T3 454 aa15.72■□□□□ 0.11
USP3-205ENST00000557884 COL4A6Q14031 1691 aa15.71■□□□□ 0.11
USP3-205ENST00000557884 TCHHQ07283 1943 aa15.71■□□□□ 0.11
USP3-205ENST00000557884 EPOPA6NHQ4 379 aa15.71■□□□□ 0.11
USP3-205ENST00000557884 TISP43B9A030 160 aa15.71■□□□□ 0.11
USP3-205ENST00000557884 RFXAPO00287 272 aa15.71■□□□□ 0.11
USP3-205ENST00000557884 ABLIM1O14639 778 aa15.71■□□□□ 0.11
USP3-205ENST00000557884 KLRC4O43908 158 aa15.71■□□□□ 0.11
USP3-205ENST00000557884 OFD1O75665 1012 aa15.71■□□□□ 0.11
USP3-205ENST00000557884 TOM1L1O75674 476 aa15.71■□□□□ 0.11
USP3-205ENST00000557884 PPP1R37O75864 691 aa15.71■□□□□ 0.11
USP3-205ENST00000557884 PRPF6O94906 941 aaKnown RBP15.71■□□□□ 0.11
USP3-205ENST00000557884 SCP2P22307 547 aa15.71■□□□□ 0.11
USP3-205ENST00000557884 PROZP22891 400 aa15.71■□□□□ 0.11
USP3-205ENST00000557884 CTNNB1P35222 781 aa15.71■□□□□ 0.11
USP3-205ENST00000557884 MLH1P40692 756 aa15.71■□□□□ 0.11
USP3-205ENST00000557884 OSTNP61366 133 aa15.71■□□□□ 0.11
USP3-205ENST00000557884 NOMO2Q5JPE7 1267 aa15.71■□□□□ 0.11
USP3-205ENST00000557884 ZPBP2Q6X784 338 aa15.71■□□□□ 0.11
USP3-205ENST00000557884 LRRC55Q6ZSA7 311 aa15.71■□□□□ 0.11
USP3-205ENST00000557884 APBB1IPQ7Z5R6 666 aaPredicted RBP15.71■□□□□ 0.11
USP3-205ENST00000557884 CEP120Q8N960 986 aa15.71■□□□□ 0.11
USP3-205ENST00000557884 ZFP42Q96MM3 310 aa15.71■□□□□ 0.11
USP3-205ENST00000557884 GAD1Q99259 594 aa15.71■□□□□ 0.11
USP3-205ENST00000557884 STRA6Q9BX79 667 aa15.71■□□□□ 0.11
USP3-205ENST00000557884 PRDM12Q9H4Q4 367 aa15.71■□□□□ 0.11
USP3-205ENST00000557884 TYW1Q9NV66 732 aaKnown RBP15.71■□□□□ 0.11
USP3-205ENST00000557884 EXOC1Q9NV70 894 aa15.71■□□□□ 0.11
USP3-205ENST00000557884 PCDHB13Q9Y5F0 798 aa15.71■□□□□ 0.11
USP3-205ENST00000557884 PVALEFA0A1B0GWK0 134 aa15.7■□□□□ 0.1
USP3-205ENST00000557884 ARL5CA6NH57 179 aa15.7■□□□□ 0.1
USP3-205ENST00000557884 ANKRD63C9JTQ0 380 aa15.7■□□□□ 0.1
USP3-205ENST00000557884 RECQL4O94761 1208 aa15.7■□□□□ 0.1
USP3-205ENST00000557884 POMCP01189 267 aa15.7■□□□□ 0.1
USP3-205ENST00000557884 RPN1P04843 607 aaKnown RBP15.7■□□□□ 0.1
USP3-205ENST00000557884 ERVK-21P61565 698 aa15.7■□□□□ 0.1
USP3-205ENST00000557884 UBE2HP62256 183 aa15.7■□□□□ 0.1
USP3-205ENST00000557884 NOLC1Q14978 699 aaKnown RBP eCLIP15.7■□□□□ 0.1
USP3-205ENST00000557884 KMT5BQ4FZB7 885 aa15.7■□□□□ 0.1
USP3-205ENST00000557884 SEZ6Q53EL9 994 aa15.7■□□□□ 0.1
USP3-205ENST00000557884 L1TD1Q5T7N2 865 aaKnown RBP15.7■□□□□ 0.1
USP3-205ENST00000557884 SLC39A4Q6P5W5 647 aa15.7■□□□□ 0.1
USP3-205ENST00000557884 TMEM192Q8IY95 271 aa15.7■□□□□ 0.1
USP3-205ENST00000557884 THNSL1Q8IYQ7 743 aa15.7■□□□□ 0.1
USP3-205ENST00000557884 LRRC43Q8N309 656 aa15.7■□□□□ 0.1
USP3-205ENST00000557884 URGCPQ8TCY9 931 aa15.7■□□□□ 0.1
USP3-205ENST00000557884 KCNN1Q92952 543 aa15.7■□□□□ 0.1
USP3-205ENST00000557884 HVCN1Q96D96 273 aa15.7■□□□□ 0.1
USP3-205ENST00000557884 ACCSQ96QU6 501 aa15.7■□□□□ 0.1
USP3-205ENST00000557884 HAPLN2Q9GZV7 340 aa15.7■□□□□ 0.1
USP3-205ENST00000557884 GBP3Q9H0R5 595 aa15.7■□□□□ 0.1
USP3-205ENST00000557884 SLC39A2Q9NP94 309 aa15.7■□□□□ 0.1
USP3-205ENST00000557884 CLDN3O15551 220 aa15.69■□□□□ 0.1
USP3-205ENST00000557884 KINO60870 393 aaKnown RBP15.69■□□□□ 0.1
USP3-205ENST00000557884 PIGRP01833 764 aa15.69■□□□□ 0.1
USP3-205ENST00000557884 MYL1P05976 194 aa15.69■□□□□ 0.1
USP3-205ENST00000557884 LINC00271P0C7V0 271 aa15.69■□□□□ 0.1
USP3-205ENST00000557884 MCF2P10911 925 aa15.69■□□□□ 0.1
USP3-205ENST00000557884 ABCD1P33897 745 aa15.69■□□□□ 0.1
USP3-205ENST00000557884 PBX3P40426 434 aa15.69■□□□□ 0.1
USP3-205ENST00000557884 SCNN1GP51170 649 aa15.69■□□□□ 0.1
USP3-205ENST00000557884 RNASELQ05823 741 aaKnown RBP15.69■□□□□ 0.1
USP3-205ENST00000557884 EHHADHQ08426 723 aa15.69■□□□□ 0.1
USP3-205ENST00000557884 DPYDQ12882 1025 aa15.69■□□□□ 0.1
USP3-205ENST00000557884 PNOCQ13519 176 aa15.69■□□□□ 0.1
USP3-205ENST00000557884 POSTNQ15063 836 aa15.69■□□□□ 0.1
USP3-205ENST00000557884 EPC2Q52LR7 807 aa15.69■□□□□ 0.1
USP3-205ENST00000557884 KANK3Q6NY19 840 aa15.69■□□□□ 0.1
USP3-205ENST00000557884 SYCP3Q8IZU3 236 aa15.69■□□□□ 0.1
USP3-205ENST00000557884 FBXO22Q8NEZ5 403 aa15.69■□□□□ 0.1
USP3-205ENST00000557884 GDPD5Q8WTR4 605 aa15.69■□□□□ 0.1
USP3-205ENST00000557884 CLP1Q92989 425 aaKnown RBP15.69■□□□□ 0.1
USP3-205ENST00000557884 CCDC34Q96HJ3 373 aa15.69■□□□□ 0.1
USP3-205ENST00000557884 GBP4Q96PP9 640 aa15.69■□□□□ 0.1
USP3-205ENST00000557884 MRPL9Q9BYD2 267 aaKnown RBP15.69■□□□□ 0.1
USP3-205ENST00000557884 UBN1Q9NPG3 1134 aa15.69■□□□□ 0.1
USP3-205ENST00000557884 TBC1D13Q9NVG8 400 aa15.69■□□□□ 0.1
USP3-205ENST00000557884 GIT1Q9Y2X7 761 aa15.69■□□□□ 0.1
USP3-205ENST00000557884 BMPR1AP36894 532 aa15.68■□□□□ 0.1
USP3-205ENST00000557884 GRM5P41594 1212 aa15.68■□□□□ 0.1
USP3-205ENST00000557884 MCL1Q07820 350 aa15.68■□□□□ 0.1
USP3-205ENST00000557884 ALCAMQ13740 583 aa15.68■□□□□ 0.1
USP3-205ENST00000557884 CLEC17AQ6ZS10 378 aa15.68■□□□□ 0.1
USP3-205ENST00000557884 STXBP4Q6ZWJ1 553 aa15.68■□□□□ 0.1
USP3-205ENST00000557884 NELFCDQ8IXH7 590 aa15.68■□□□□ 0.1
USP3-205ENST00000557884 ERCC4Q92889 916 aaPredicted RBP15.68■□□□□ 0.1
USP3-205ENST00000557884 GUCD1Q96NT3 240 aa15.68■□□□□ 0.1
USP3-205ENST00000557884 RPS6KC1Q96S38 1066 aa15.68■□□□□ 0.1
USP3-205ENST00000557884 MSTO1Q9BUK6 570 aa15.68■□□□□ 0.1
USP3-205ENST00000557884 CCDC94Q9BW85 323 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms