RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 BRWD1Q9NSI6 2320 aa12.63□□□□□ -0.39
LINC00648-204ENST00000557749 SPATA31C1P0DKV0 1188 aa12.63□□□□□ -0.39
LINC00648-204ENST00000557749 NCLP19338 710 aaKnown RBP12.63□□□□□ -0.39
LINC00648-204ENST00000557749 FGFR4P22455 802 aa12.63□□□□□ -0.39
LINC00648-204ENST00000557749 NAMPTP43490 491 aa12.63□□□□□ -0.39
LINC00648-204ENST00000557749 NDUFV1P49821 464 aa12.63□□□□□ -0.39
LINC00648-204ENST00000557749 GATMP50440 423 aa12.63□□□□□ -0.39
LINC00648-204ENST00000557749 EFNA5P52803 228 aa12.63□□□□□ -0.39
LINC00648-204ENST00000557749 LARP1BQ659C4 914 aaKnown RBP12.63□□□□□ -0.39
LINC00648-204ENST00000557749 EP400NLQ6ZTU2 488 aa12.63□□□□□ -0.39
LINC00648-204ENST00000557749 MRPL10Q7Z7H8 261 aaKnown RBP12.63□□□□□ -0.39
LINC00648-204ENST00000557749 EFHBQ8N7U6 833 aa12.63□□□□□ -0.39
LINC00648-204ENST00000557749 IGSF22Q8N9C0 903 aa12.63□□□□□ -0.39
LINC00648-204ENST00000557749 HELQQ8TDG4 1101 aa12.63□□□□□ -0.39
LINC00648-204ENST00000557749 SNX29Q8TEQ0 813 aa12.63□□□□□ -0.39
LINC00648-204ENST00000557749 PIGOQ8TEQ8 1089 aa12.63□□□□□ -0.39
LINC00648-204ENST00000557749 LRRN4Q8WUT4 740 aa12.63□□□□□ -0.39
LINC00648-204ENST00000557749 FAM193BQ96PV7 902 aaPredicted RBP12.63□□□□□ -0.39
LINC00648-204ENST00000557749 NT5C3AQ9H0P0 336 aa12.63□□□□□ -0.39
LINC00648-204ENST00000557749 POLR3FQ9H1D9 316 aaPredicted RBP12.63□□□□□ -0.39
LINC00648-204ENST00000557749 CWH43Q9H720 699 aa12.63□□□□□ -0.39
LINC00648-204ENST00000557749 TLE6Q9H808 572 aa12.63□□□□□ -0.39
LINC00648-204ENST00000557749 RSAD1Q9HA92 442 aa12.63□□□□□ -0.39
LINC00648-204ENST00000557749 XPNPEP1Q9NQW7 623 aa12.63□□□□□ -0.39
LINC00648-204ENST00000557749 ENTPD7Q9NQZ7 604 aa12.63□□□□□ -0.39
LINC00648-204ENST00000557749 DNM3Q9UQ16 869 aa12.63□□□□□ -0.39
LINC00648-204ENST00000557749 KIAA1671Q9BY89 1806 aa12.62□□□□□ -0.39
LINC00648-204ENST00000557749 LRRIQ4A6NIV6 560 aa12.62□□□□□ -0.39
LINC00648-204ENST00000557749 WNT7AO00755 349 aa12.62□□□□□ -0.39
LINC00648-204ENST00000557749 TSPAN1O60635 241 aa12.62□□□□□ -0.39
LINC00648-204ENST00000557749 MED24O75448 989 aa12.62□□□□□ -0.39
LINC00648-204ENST00000557749 CSDE1O75534 798 aaKnown RBP12.62□□□□□ -0.39
LINC00648-204ENST00000557749 AP1G2O75843 785 aa12.62□□□□□ -0.39
LINC00648-204ENST00000557749 ITGA4P13612 1032 aa12.62□□□□□ -0.39
LINC00648-204ENST00000557749 PDIA4P13667 645 aaKnown RBP12.62□□□□□ -0.39
LINC00648-204ENST00000557749 ATF7P17544 494 aaPredicted RBP12.62□□□□□ -0.39
LINC00648-204ENST00000557749 CYP11B2P19099 503 aa12.62□□□□□ -0.39
LINC00648-204ENST00000557749 KCNQ1P51787 676 aa12.62□□□□□ -0.39
LINC00648-204ENST00000557749 HYAL1Q12794 435 aa12.62□□□□□ -0.39
LINC00648-204ENST00000557749 CAPSQ13938 189 aa12.62□□□□□ -0.39
LINC00648-204ENST00000557749 SMC1AQ14683 1233 aaKnown RBP12.62□□□□□ -0.39
LINC00648-204ENST00000557749 MAPK6Q16659 721 aa12.62□□□□□ -0.39
LINC00648-204ENST00000557749 CTC1Q2NKJ3 1217 aa12.62□□□□□ -0.39
LINC00648-204ENST00000557749 CLLU1OSQ5K130 101 aa12.62□□□□□ -0.39
LINC00648-204ENST00000557749 SLC27A1Q6PCB7 646 aa12.62□□□□□ -0.39
LINC00648-204ENST00000557749 TMEM87AQ8NBN3 555 aa12.62□□□□□ -0.39
LINC00648-204ENST00000557749 DEPTORQ8TB45 409 aa12.62□□□□□ -0.39
LINC00648-204ENST00000557749 TSC1Q92574 1164 aa12.62□□□□□ -0.39
LINC00648-204ENST00000557749 CDK5RAP3Q96JB5 506 aa12.62□□□□□ -0.39
LINC00648-204ENST00000557749 AK8Q96MA6 479 aa12.62□□□□□ -0.39
LINC00648-204ENST00000557749 TCF25Q9BQ70 676 aa12.62□□□□□ -0.39
LINC00648-204ENST00000557749 ADPGKQ9BRR6 497 aa12.62□□□□□ -0.39
LINC00648-204ENST00000557749 TMEM175Q9BSA9 504 aa12.62□□□□□ -0.39
LINC00648-204ENST00000557749 CSRNP2Q9H175 543 aa12.62□□□□□ -0.39
LINC00648-204ENST00000557749 C17orf75Q9HAS0 396 aa12.62□□□□□ -0.39
LINC00648-204ENST00000557749 KCND2Q9NZV8 630 aa12.62□□□□□ -0.39
LINC00648-204ENST00000557749 N4BP3O15049 544 aa12.61□□□□□ -0.39
LINC00648-204ENST00000557749 CCNYL3P0C7X3 344 aa12.61□□□□□ -0.39
LINC00648-204ENST00000557749 SCP2P22307 547 aa12.61□□□□□ -0.39
LINC00648-204ENST00000557749 GLRA2P23416 452 aa12.61□□□□□ -0.39
LINC00648-204ENST00000557749 BCAR1P56945 870 aa12.61□□□□□ -0.39
LINC00648-204ENST00000557749 ATP2C1P98194 919 aaPredicted RBP12.61□□□□□ -0.39
LINC00648-204ENST00000557749 MBTD1Q05BQ5 628 aa12.61□□□□□ -0.39
LINC00648-204ENST00000557749 SMAD4Q13485 552 aaKnown RBP12.61□□□□□ -0.39
LINC00648-204ENST00000557749 FAM187BQ17R55 369 aa12.61□□□□□ -0.39
LINC00648-204ENST00000557749 CDCA2Q69YH5 1023 aaPredicted RBP12.61□□□□□ -0.39
LINC00648-204ENST00000557749 ELMSAN1Q6PJG2 1045 aa12.61□□□□□ -0.39
LINC00648-204ENST00000557749 SLC39A11Q8N1S5 342 aa12.61□□□□□ -0.39
LINC00648-204ENST00000557749 INTS4Q96HW7 963 aaKnown RBP12.61□□□□□ -0.39
LINC00648-204ENST00000557749 DRC1Q96MC2 740 aa12.61□□□□□ -0.39
LINC00648-204ENST00000557749 C1QTNF1Q9BXJ1 281 aa12.61□□□□□ -0.39
LINC00648-204ENST00000557749 RNF19AQ9NV58 838 aa12.61□□□□□ -0.39
LINC00648-204ENST00000557749 TBC1D13Q9NVG8 400 aa12.61□□□□□ -0.39
LINC00648-204ENST00000557749 CD207Q9UJ71 328 aa12.61□□□□□ -0.39
LINC00648-204ENST00000557749 SSX2IPQ9Y2D8 614 aa12.61□□□□□ -0.39
LINC00648-204ENST00000557749 GIT1Q9Y2X7 761 aa12.61□□□□□ -0.39
LINC00648-204ENST00000557749 PCDHB6Q9Y5E3 794 aa12.61□□□□□ -0.39
LINC00648-204ENST00000557749 FSCN2O14926 492 aa12.6□□□□□ -0.39
LINC00648-204ENST00000557749 ZBTB39O15060 712 aa12.6□□□□□ -0.39
LINC00648-204ENST00000557749 INPPL1O15357 1258 aa12.6□□□□□ -0.39
LINC00648-204ENST00000557749 ZC3H11AO75152 810 aaKnown RBP eCLIP12.6□□□□□ -0.39
LINC00648-204ENST00000557749 OFD1O75665 1012 aa12.6□□□□□ -0.39
LINC00648-204ENST00000557749 EYA4O95677 639 aa12.6□□□□□ -0.39
LINC00648-204ENST00000557749 HOXB8P17481 243 aaPredicted RBP12.6□□□□□ -0.39
LINC00648-204ENST00000557749 HOXA11P31270 313 aaPredicted RBP12.6□□□□□ -0.39
LINC00648-204ENST00000557749 NRIP1P48552 1158 aa12.6□□□□□ -0.39
LINC00648-204ENST00000557749 TOB1P50616 345 aaPredicted RBP12.6□□□□□ -0.39
LINC00648-204ENST00000557749 DMP1Q13316 513 aaPredicted RBP12.6□□□□□ -0.39
LINC00648-204ENST00000557749 ADAM15Q13444 863 aa12.6□□□□□ -0.39
LINC00648-204ENST00000557749 CAMK1Q14012 370 aa12.6□□□□□ -0.39
LINC00648-204ENST00000557749 TMC7Q7Z402 723 aa12.6□□□□□ -0.39
LINC00648-204ENST00000557749 C4orf32Q8N8J7 132 aa12.6□□□□□ -0.39
LINC00648-204ENST00000557749 ASAP3Q8TDY4 903 aa12.6□□□□□ -0.39
LINC00648-204ENST00000557749 PRKD2Q9BZL6 878 aa12.6□□□□□ -0.39
LINC00648-204ENST00000557749 BHMT2Q9H2M3 363 aa12.6□□□□□ -0.39
LINC00648-204ENST00000557749 IGFLR1Q9H665 355 aa12.6□□□□□ -0.39
LINC00648-204ENST00000557749 MINDY3Q9H8M7 445 aa12.6□□□□□ -0.39
LINC00648-204ENST00000557749 DDX19AQ9NUU7 478 aaKnown RBP12.6□□□□□ -0.39
LINC00648-204ENST00000557749 MAP10Q9P2G4 905 aa12.6□□□□□ -0.39
LINC00648-204ENST00000557749 KIAA1024Q9UPX6 916 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms