RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 C2orf40Q9H1Z8 148 aa16.2■□□□□ 0.18
SHMT2-235ENST00000557740 PARP2Q9UGN5 583 aa16.2■□□□□ 0.18
SHMT2-235ENST00000557740 ZMYM2Q9UBW7 1377 aa16.2■□□□□ 0.18
SHMT2-235ENST00000557740 ZNF318Q5VUA4 2279 aa16.19■□□□□ 0.18
SHMT2-235ENST00000557740 A0A1B0GUA9 196 aa16.19■□□□□ 0.18
SHMT2-235ENST00000557740 ADH1AP07327 375 aa16.19■□□□□ 0.18
SHMT2-235ENST00000557740 AKAP5P24588 427 aa16.19■□□□□ 0.18
SHMT2-235ENST00000557740 CCT6AP40227 531 aaKnown RBP16.19■□□□□ 0.18
SHMT2-235ENST00000557740 GRIK3Q13003 919 aa16.19■□□□□ 0.18
SHMT2-235ENST00000557740 MTMR3Q13615 1198 aa16.19■□□□□ 0.18
SHMT2-235ENST00000557740 KANK3Q6NY19 840 aa16.19■□□□□ 0.18
SHMT2-235ENST00000557740 ELMSAN1Q6PJG2 1045 aa16.19■□□□□ 0.18
SHMT2-235ENST00000557740 PPP4R3CPQ6ZMV5 832 aa16.19■□□□□ 0.18
SHMT2-235ENST00000557740 FBXL6Q8N531 539 aa16.19■□□□□ 0.18
SHMT2-235ENST00000557740 KREMEN2Q8NCW0 462 aa16.19■□□□□ 0.18
SHMT2-235ENST00000557740 DEPTORQ8TB45 409 aa16.19■□□□□ 0.18
SHMT2-235ENST00000557740 COLEC11Q9BWP8 271 aa16.19■□□□□ 0.18
SHMT2-235ENST00000557740 N4BP3O15049 544 aa16.18■□□□□ 0.18
SHMT2-235ENST00000557740 LIG1P18858 919 aa16.18■□□□□ 0.18
SHMT2-235ENST00000557740 MUTP22033 750 aa16.18■□□□□ 0.18
SHMT2-235ENST00000557740 PPP2R5AQ15172 486 aa16.18■□□□□ 0.18
SHMT2-235ENST00000557740 MAPK6Q16659 721 aa16.18■□□□□ 0.18
SHMT2-235ENST00000557740 CCDC149Q6ZUS6 474 aa16.18■□□□□ 0.18
SHMT2-235ENST00000557740 MIOSQ9NXC5 875 aa16.18■□□□□ 0.18
SHMT2-235ENST00000557740 KLK14Q9P0G3 267 aa16.18■□□□□ 0.18
SHMT2-235ENST00000557740 SORCS3Q9UPU3 1222 aa16.18■□□□□ 0.18
SHMT2-235ENST00000557740 F8W810 466 aa16.17■□□□□ 0.18
SHMT2-235ENST00000557740 LILRB3O75022 631 aa16.17■□□□□ 0.18
SHMT2-235ENST00000557740 GLUD1P00367 558 aa16.17■□□□□ 0.18
SHMT2-235ENST00000557740 PRKCBP05771 671 aa16.17■□□□□ 0.18
SHMT2-235ENST00000557740 CYP11B2P19099 503 aa16.17■□□□□ 0.18
SHMT2-235ENST00000557740 NAMPTP43490 491 aa16.17■□□□□ 0.18
SHMT2-235ENST00000557740 FXR2P51116 673 aaKnown RBP eCLIP16.17■□□□□ 0.18
SHMT2-235ENST00000557740 DSG1Q02413 1049 aa16.17■□□□□ 0.18
SHMT2-235ENST00000557740 NHLH1Q02575 133 aa16.17■□□□□ 0.18
SHMT2-235ENST00000557740 PRPF4BQ13523 1007 aaKnown RBP16.17■□□□□ 0.18
SHMT2-235ENST00000557740 NBR1Q14596 966 aa16.17■□□□□ 0.18
SHMT2-235ENST00000557740 FAM187BQ17R55 369 aa16.17■□□□□ 0.18
SHMT2-235ENST00000557740 TAS1R1Q7RTX1 841 aa16.17■□□□□ 0.18
SHMT2-235ENST00000557740 GPR149Q86SP6 731 aa16.17■□□□□ 0.18
SHMT2-235ENST00000557740 UBALD2Q8IYN6 164 aa16.17■□□□□ 0.18
SHMT2-235ENST00000557740 PLCD3Q8N3E9 789 aa16.17■□□□□ 0.18
SHMT2-235ENST00000557740 BSNDQ8WZ55 320 aa16.17■□□□□ 0.18
SHMT2-235ENST00000557740 ASIC4Q96FT7 647 aa16.17■□□□□ 0.18
SHMT2-235ENST00000557740 IFT74Q96LB3 600 aa16.17■□□□□ 0.18
SHMT2-235ENST00000557740 ADPGKQ9BRR6 497 aa16.17■□□□□ 0.18
SHMT2-235ENST00000557740 RAB34Q9BZG1 259 aa16.17■□□□□ 0.18
SHMT2-235ENST00000557740 FZD8Q9H461 694 aa16.17■□□□□ 0.18
SHMT2-235ENST00000557740 PDZD7Q9H5P4 517 aa16.17■□□□□ 0.18
SHMT2-235ENST00000557740 MAN1C1Q9NR34 630 aa16.17■□□□□ 0.18
SHMT2-235ENST00000557740 LRWD1Q9UFC0 647 aa16.17■□□□□ 0.18
SHMT2-235ENST00000557740 DPP7Q9UHL4 492 aa16.17■□□□□ 0.18
SHMT2-235ENST00000557740 USTQ9Y2C2 406 aa16.17■□□□□ 0.18
SHMT2-235ENST00000557740 KIF3AQ9Y496 699 aa16.17■□□□□ 0.18
SHMT2-235ENST00000557740 TRIOO75962 3097 aa16.17■□□□□ 0.18
SHMT2-235ENST00000557740 TEX28O15482 410 aa16.16■□□□□ 0.18
SHMT2-235ENST00000557740 C8orf34Q49A92 452 aa16.16■□□□□ 0.18
SHMT2-235ENST00000557740 FUT10Q6P4F1 479 aa16.16■□□□□ 0.18
SHMT2-235ENST00000557740 C15orf39Q6ZRI6 1047 aa16.16■□□□□ 0.18
SHMT2-235ENST00000557740 OTOP3Q7RTS5 596 aa16.16■□□□□ 0.18
SHMT2-235ENST00000557740 RNF168Q8IYW5 571 aaPredicted RBP16.16■□□□□ 0.18
SHMT2-235ENST00000557740 ZDHHC14Q8IZN3 488 aa16.16■□□□□ 0.18
SHMT2-235ENST00000557740 ACSF2Q96CM8 615 aaPredicted RBP16.16■□□□□ 0.18
SHMT2-235ENST00000557740 KIF2CQ99661 725 aa16.16■□□□□ 0.18
SHMT2-235ENST00000557740 PRRX2Q99811 253 aa16.16■□□□□ 0.18
SHMT2-235ENST00000557740 BHMT2Q9H2M3 363 aa16.16■□□□□ 0.18
SHMT2-235ENST00000557740 ADAM28Q9UKQ2 775 aa16.16■□□□□ 0.18
SHMT2-235ENST00000557740 STK24Q9Y6E0 443 aa16.16■□□□□ 0.18
SHMT2-235ENST00000557740 ASGR2P07307 311 aa16.15■□□□□ 0.18
SHMT2-235ENST00000557740 U2AF2P26368 475 aaKnown RBP eCLIP16.15■□□□□ 0.18
SHMT2-235ENST00000557740 CREMQ03060 361 aa16.15■□□□□ 0.18
SHMT2-235ENST00000557740 USP41Q3LFD5 358 aa16.15■□□□□ 0.18
SHMT2-235ENST00000557740 KIAA0319Q5VV43 1072 aa16.15■□□□□ 0.18
SHMT2-235ENST00000557740 ALYREFQ86V81 257 aaKnown RBP16.15■□□□□ 0.18
SHMT2-235ENST00000557740 GSTCDQ8NEC7 633 aa16.15■□□□□ 0.18
SHMT2-235ENST00000557740 CMASQ8NFW8 434 aaPredicted RBP16.15■□□□□ 0.18
SHMT2-235ENST00000557740 SNX29Q8TEQ0 813 aa16.15■□□□□ 0.18
SHMT2-235ENST00000557740 KIFAP3Q92845 792 aa16.15■□□□□ 0.18
SHMT2-235ENST00000557740 CCDC113Q9H0I3 377 aa16.15■□□□□ 0.18
SHMT2-235ENST00000557740 RXFP1Q9HBX9 757 aa16.15■□□□□ 0.18
SHMT2-235ENST00000557740 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.15■□□□□ 0.18
SHMT2-235ENST00000557740 LIMD1Q9UGP4 676 aa16.15■□□□□ 0.18
SHMT2-235ENST00000557740 KIAA1024Q9UPX6 916 aa16.15■□□□□ 0.18
SHMT2-235ENST00000557740 SF3B1O75533 1304 aaKnown RBP eCLIP16.15■□□□□ 0.185e-8■■■■■ 37.4
SHMT2-235ENST00000557740 TTLL13PA6NNM8 815 aa16.14■□□□□ 0.17
SHMT2-235ENST00000557740 ACKR2O00590 384 aa16.14■□□□□ 0.17
SHMT2-235ENST00000557740 ST18O60284 1047 aa16.14■□□□□ 0.17
SHMT2-235ENST00000557740 TADA2AO75478 443 aa16.14■□□□□ 0.17
SHMT2-235ENST00000557740 RECQL4O94761 1208 aa16.14■□□□□ 0.17
SHMT2-235ENST00000557740 BRD1O95696 1058 aa16.14■□□□□ 0.17
SHMT2-235ENST00000557740 EFEMP2O95967 443 aa16.14■□□□□ 0.17
SHMT2-235ENST00000557740 EFNA5P52803 228 aa16.14■□□□□ 0.17
SHMT2-235ENST00000557740 PTPN5P54829 565 aa16.14■□□□□ 0.17
SHMT2-235ENST00000557740 PTGDRQ13258 359 aa16.14■□□□□ 0.17
SHMT2-235ENST00000557740 TUSC3Q13454 348 aa16.14■□□□□ 0.17
SHMT2-235ENST00000557740 HSP90AA2PQ14568 343 aaPredicted RBP16.14■□□□□ 0.17
SHMT2-235ENST00000557740 RABEP1Q15276 862 aa16.14■□□□□ 0.17
SHMT2-235ENST00000557740 DCAF4L1Q3SXM0 396 aa16.14■□□□□ 0.17
SHMT2-235ENST00000557740 APBB1IPQ7Z5R6 666 aaPredicted RBP16.14■□□□□ 0.17
SHMT2-235ENST00000557740 C4orf32Q8N8J7 132 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms