RNA–Protein interactions for RNA: ENST00000557406.5

PAPOLA-224, Transcript of poly(A) polymerase alpha, humanhuman

TSL 3

Gene PAPOLA, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-224ENST00000557406 CCSAPQ6IQ19 270 aaPredicted RBP3.21□□□□□ -1.9
PAPOLA-224ENST00000557406 DDX46Q7L014 1031 aaKnown RBP3.21□□□□□ -1.9
PAPOLA-224ENST00000557406 APBB1IPQ7Z5R6 666 aaPredicted RBP3.21□□□□□ -1.9
PAPOLA-224ENST00000557406 AFAP1L2Q8N4X5 818 aa3.21□□□□□ -1.9
PAPOLA-224ENST00000557406 MSL3Q8N5Y2 521 aaKnown RBP3.21□□□□□ -1.9
PAPOLA-224ENST00000557406 LEO1Q8WVC0 666 aaPredicted RBP3.21□□□□□ -1.9
PAPOLA-224ENST00000557406 GAB3Q8WWW8 586 aa3.21□□□□□ -1.9
PAPOLA-224ENST00000557406 UIMC1Q96RL1 719 aa3.21□□□□□ -1.9
PAPOLA-224ENST00000557406 PDCD2LQ9BRP1 358 aa3.21□□□□□ -1.9
PAPOLA-224ENST00000557406 SLC2A4RGQ9NR83 387 aa3.21□□□□□ -1.9
PAPOLA-224ENST00000557406 ING3Q9NXR8 418 aa3.21□□□□□ -1.9
PAPOLA-224ENST00000557406 PTGFRNQ9P2B2 879 aa3.21□□□□□ -1.9
PAPOLA-224ENST00000557406 TRPS1Q9UHF7 1281 aa3.21□□□□□ -1.9
PAPOLA-224ENST00000557406 EVLQ9UI08 416 aaPredicted RBP3.21□□□□□ -1.9
PAPOLA-224ENST00000557406 XDHP47989 1333 aa3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 LOC102724159A0A0B4J2E5 919 aa3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 GOLGA8BA8MQT2 603 aa3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 NEMP1O14524 444 aa3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 KIF3BO15066 747 aa3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 PLIN1O60240 522 aa3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 IPO13O94829 963 aaKnown RBP3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 NUDT3O95989 172 aa3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 NPEPPSP55786 919 aa3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 MEF2AQ02078 507 aaPredicted RBP3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 STRN3Q13033 797 aa3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 CRHR2Q13324 411 aa3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 PWP2Q15269 919 aaKnown RBP3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 DDB1Q16531 1140 aa3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 ATP13A4Q4VNC1 1196 aa3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 ZKSCAN2Q63HK3 967 aa3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 Q6ZPA2 131 aa3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 RHOUQ7L0Q8 258 aa3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 DOK3Q7L591 496 aa3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 NECAB2Q7Z6G3 386 aa3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 C11orf74Q86VG3 221 aa3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 GLB1L2Q8IW92 636 aa3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 LILRA3Q8N6C8 439 aaPredicted RBP3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 WDR66Q8TBY9 1149 aa3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 MTMR8Q96EF0 704 aa3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 SMAD5Q99717 465 aaKnown RBP3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 IFT22Q9H7X7 185 aa3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 ADARB2Q9NS39 739 aaKnown RBP3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 GPRC5BQ9NZH0 403 aa3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 RCAN3Q9UKA8 241 aa3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 USP18Q9UMW8 372 aa3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 APOBEC2Q9Y235 224 aaKnown RBP3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 CDY2AQ9Y6F7 541 aa3.2□□□□□ -1.9
PAPOLA-224ENST00000557406 WASHC2CQ9Y4E1 1318 aa3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 GOLGA6L6A8MZA4 724 aa3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 MASP2O00187 686 aa3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 HOXA3O43365 443 aaPredicted RBP3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 TSPAN6O43657 245 aa3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 BRINP1O60477 761 aa3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 ULK1O75385 1050 aa3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 KATNA1O75449 491 aa3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 LTA4HP09960 611 aaKnown RBP3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 KRT4P19013 534 aa3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 ID4P47928 161 aa3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 SESN3P58005 492 aa3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 PPARAQ07869 468 aa3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 ITKQ08881 620 aa3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 MRPL49Q13405 166 aaKnown RBP3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 NFE2Q16621 373 aaPredicted RBP3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 FSCN1Q16658 493 aaKnown RBP3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 C19orf54Q5BKX5 351 aa3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 RNF219Q5W0B1 726 aaPredicted RBP3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 BHLHA9Q7RTU4 235 aa3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 GPRIN1Q7Z2K8 1008 aa3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 STRA8Q7Z7C7 330 aa3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 RAVER1Q8IY67 606 aaKnown RBP3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 ELOA2Q8IYF1 753 aaPredicted RBP3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 CLRN3Q8NCR9 226 aa3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 OR52N2Q8NGI0 321 aa3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 OR14C36Q8NHC7 312 aa3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 ST8SIA2Q92186 375 aa3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 USP7Q93009 1102 aa3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 TSR2Q969E8 191 aaKnown RBP3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 ORAI2Q96SN7 254 aa3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 MNTQ99583 582 aa3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 LSM14BQ9BX40 385 aaKnown RBP3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 GPR87Q9BY21 358 aa3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 ANO3Q9BYT9 981 aa3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 CPEB1Q9BZB8 566 aaKnown RBP3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 RIOX1Q9H6W3 641 aa3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 TOPORSQ9NS56 1045 aaPredicted RBP3.19□□□□□ -1.9
PAPOLA-224ENST00000557406 KRTAP29-1A8MX34 341 aaPredicted RBP3.18□□□□□ -1.9
PAPOLA-224ENST00000557406 MFAP3LO75121 409 aa3.18□□□□□ -1.9
PAPOLA-224ENST00000557406 CAND2O75155 1236 aa3.18□□□□□ -1.9
PAPOLA-224ENST00000557406 EIF3JO75822 258 aaKnown RBP3.18□□□□□ -1.9
PAPOLA-224ENST00000557406 EYA4O95677 639 aa3.18□□□□□ -1.9
PAPOLA-224ENST00000557406 SCGB1D2O95969 90 aa3.18□□□□□ -1.9
PAPOLA-224ENST00000557406 GCP02774 474 aa3.18□□□□□ -1.9
PAPOLA-224ENST00000557406 ERBB2P04626 1255 aa3.18□□□□□ -1.9
PAPOLA-224ENST00000557406 KRT18P05783 430 aaKnown RBP3.18□□□□□ -1.9
PAPOLA-224ENST00000557406 CLEC2LP0C7M8 214 aa3.18□□□□□ -1.9
PAPOLA-224ENST00000557406 ATF3P18847 181 aa3.18□□□□□ -1.9
PAPOLA-224ENST00000557406 ENPP1P22413 925 aa3.18□□□□□ -1.9
PAPOLA-224ENST00000557406 NR4A1P22736 598 aa3.18□□□□□ -1.9
PAPOLA-224ENST00000557406 ADRA1BP35368 520 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms