RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 NFKBIZQ9BYH8 718 aa11.39□□□□□ -0.59
RDH11-210ENST00000557331 SLKQ9H2G2 1235 aaPredicted RBP11.39□□□□□ -0.59
RDH11-210ENST00000557331 ZSWIM4Q9H7M6 989 aa11.39□□□□□ -0.59
RDH11-210ENST00000557331 DLGAP2Q9P1A6 1054 aa11.39□□□□□ -0.59
RDH11-210ENST00000557331 VPS54Q9P1Q0 977 aa11.39□□□□□ -0.59
RDH11-210ENST00000557331 DDX25Q9UHL0 483 aaKnown RBP11.39□□□□□ -0.59
RDH11-210ENST00000557331 CA14Q9ULX7 337 aa11.39□□□□□ -0.59
RDH11-210ENST00000557331 PRG3Q9Y2Y8 225 aaPredicted RBP11.39□□□□□ -0.59
RDH11-210ENST00000557331 IPPQ9Y573 584 aa11.39□□□□□ -0.59
RDH11-210ENST00000557331 C2orf16Q68DN1 1984 aa11.39□□□□□ -0.59
RDH11-210ENST00000557331 FANCMQ8IYD8 2048 aa11.38□□□□□ -0.59
RDH11-210ENST00000557331 KANSL1LA0AUZ9 987 aa11.38□□□□□ -0.59
RDH11-210ENST00000557331 CPLX1O14810 134 aa11.38□□□□□ -0.59
RDH11-210ENST00000557331 LAMTOR5O43504 91 aa11.38□□□□□ -0.59
RDH11-210ENST00000557331 TGM5O43548 720 aa11.38□□□□□ -0.59
RDH11-210ENST00000557331 RFPL2O75678 378 aa11.38□□□□□ -0.59
RDH11-210ENST00000557331 ZMYND10O75800 440 aa11.38□□□□□ -0.59
RDH11-210ENST00000557331 XBP1P17861 261 aa11.38□□□□□ -0.59
RDH11-210ENST00000557331 FSHRP23945 695 aa11.38□□□□□ -0.59
RDH11-210ENST00000557331 YWHABP31946 246 aaKnown RBP11.38□□□□□ -0.59
RDH11-210ENST00000557331 PTENP60484 403 aa11.38□□□□□ -0.59
RDH11-210ENST00000557331 SSRP1Q08945 709 aaKnown RBP11.38□□□□□ -0.59
RDH11-210ENST00000557331 EPHA7Q15375 998 aa11.38□□□□□ -0.59
RDH11-210ENST00000557331 UBXN11Q5T124 520 aa11.38□□□□□ -0.59
RDH11-210ENST00000557331 LIN9Q5TKA1 542 aa11.38□□□□□ -0.59
RDH11-210ENST00000557331 IFNLR1Q8IU57 520 aaPredicted RBP11.38□□□□□ -0.59
RDH11-210ENST00000557331 BLIDQ8IZY5 108 aa11.38□□□□□ -0.59
RDH11-210ENST00000557331 RSAD2Q8WXG1 361 aa11.38□□□□□ -0.59
RDH11-210ENST00000557331 GAD1Q99259 594 aa11.38□□□□□ -0.59
RDH11-210ENST00000557331 CSRNP2Q9H175 543 aa11.38□□□□□ -0.59
RDH11-210ENST00000557331 MARCH5Q9NX47 278 aa11.38□□□□□ -0.59
RDH11-210ENST00000557331 ADAM28Q9UKQ2 775 aa11.38□□□□□ -0.59
RDH11-210ENST00000557331 CDH7Q9ULB5 785 aa11.38□□□□□ -0.59
RDH11-210ENST00000557331 KCNH3Q9ULD8 1083 aa11.38□□□□□ -0.59
RDH11-210ENST00000557331 MRPS17Q9Y2R5 130 aaKnown RBP11.38□□□□□ -0.59
RDH11-210ENST00000557331 R4GN57 208 aa11.38□□□□□ -0.59
RDH11-210ENST00000557331 SF3B1O75533 1304 aaKnown RBP eCLIP11.37□□□□□ -0.592e-8■■■■■ 46.8
RDH11-210ENST00000557331 EDIL3O43854 480 aa11.37□□□□□ -0.59
RDH11-210ENST00000557331 MARCH6O60337 910 aa11.37□□□□□ -0.59
RDH11-210ENST00000557331 B4GALT3O60512 393 aa11.37□□□□□ -0.59
RDH11-210ENST00000557331 CDC45O75419 566 aa11.37□□□□□ -0.59
RDH11-210ENST00000557331 TADA2AO75478 443 aa11.37□□□□□ -0.59
RDH11-210ENST00000557331 BAG4O95429 457 aaKnown RBP11.37□□□□□ -0.59
RDH11-210ENST00000557331 DCNP07585 359 aaKnown RBP11.37□□□□□ -0.59
RDH11-210ENST00000557331 LMNB2Q03252 620 aa11.37□□□□□ -0.59
RDH11-210ENST00000557331 GRIK3Q13003 919 aa11.37□□□□□ -0.59
RDH11-210ENST00000557331 PPP2R5DQ14738 602 aa11.37□□□□□ -0.59
RDH11-210ENST00000557331 EMC2Q15006 297 aa11.37□□□□□ -0.59
RDH11-210ENST00000557331 SPECC1Q5M775 1068 aa11.37□□□□□ -0.59
RDH11-210ENST00000557331 VARS2Q5ST30 1063 aaKnown RBP11.37□□□□□ -0.59
RDH11-210ENST00000557331 FUT10Q6P4F1 479 aa11.37□□□□□ -0.59
RDH11-210ENST00000557331 PALB2Q86YC2 1186 aa11.37□□□□□ -0.59
RDH11-210ENST00000557331 SLFN12Q8IYM2 578 aa11.37□□□□□ -0.59
RDH11-210ENST00000557331 SMG8Q8ND04 991 aaKnown RBP11.37□□□□□ -0.59
RDH11-210ENST00000557331 JAKMIP1Q96N16 626 aaKnown RBP11.37□□□□□ -0.59
RDH11-210ENST00000557331 MTRQ99707 1265 aa11.37□□□□□ -0.59
RDH11-210ENST00000557331 IER2Q9BTL4 223 aa11.37□□□□□ -0.59
RDH11-210ENST00000557331 DDX23Q9BUQ8 820 aaKnown RBP11.37□□□□□ -0.59
RDH11-210ENST00000557331 KCNMB3Q9NPA1 279 aa11.37□□□□□ -0.59
RDH11-210ENST00000557331 NUMBLQ9Y6R0 609 aa11.37□□□□□ -0.59
RDH11-210ENST00000557331 F5P12259 2224 aa11.37□□□□□ -0.59
RDH11-210ENST00000557331 CCDC194A0A1B0GVG4 234 aa11.36□□□□□ -0.59
RDH11-210ENST00000557331 EPB41L2O43491 1005 aaKnown RBP11.36□□□□□ -0.59
RDH11-210ENST00000557331 TBC1D4O60343 1298 aa11.36□□□□□ -0.59
RDH11-210ENST00000557331 DGAT1O75907 488 aa11.36□□□□□ -0.59
RDH11-210ENST00000557331 TDP2O95551 362 aa11.36□□□□□ -0.59
RDH11-210ENST00000557331 RPS6KB1P23443 525 aa11.36□□□□□ -0.59
RDH11-210ENST00000557331 PDIA3P30101 505 aaKnown RBP11.36□□□□□ -0.59
RDH11-210ENST00000557331 MLH1P40692 756 aa11.36□□□□□ -0.59
RDH11-210ENST00000557331 NRLP54845 237 aa11.36□□□□□ -0.59
RDH11-210ENST00000557331 NPEPPSP55786 919 aa11.36□□□□□ -0.59
RDH11-210ENST00000557331 ZBTB41Q5SVQ8 909 aa11.36□□□□□ -0.59
RDH11-210ENST00000557331 SLC27A1Q6PCB7 646 aa11.36□□□□□ -0.59
RDH11-210ENST00000557331 MAMSTRQ6ZN01 415 aa11.36□□□□□ -0.59
RDH11-210ENST00000557331 GET4Q7L5D6 327 aaPredicted RBP11.36□□□□□ -0.59
RDH11-210ENST00000557331 TAS1R1Q7RTX1 841 aa11.36□□□□□ -0.59
RDH11-210ENST00000557331 SUMF1Q8NBK3 374 aa11.36□□□□□ -0.59
RDH11-210ENST00000557331 RIN2Q8WYP3 895 aaPredicted RBP11.36□□□□□ -0.59
RDH11-210ENST00000557331 TMEM143Q96AN5 459 aa11.36□□□□□ -0.59
RDH11-210ENST00000557331 ZNF274Q96GC6 653 aaPredicted RBP11.36□□□□□ -0.59
RDH11-210ENST00000557331 PRIMPOLQ96LW4 560 aa11.36□□□□□ -0.59
RDH11-210ENST00000557331 SH2D3AQ9BRG2 576 aa11.36□□□□□ -0.59
RDH11-210ENST00000557331 TTPALQ9BTX7 342 aa11.36□□□□□ -0.59
RDH11-210ENST00000557331 MINDY3Q9H8M7 445 aa11.36□□□□□ -0.59
RDH11-210ENST00000557331 SPATA6Q9NWH7 488 aaPredicted RBP11.36□□□□□ -0.59
RDH11-210ENST00000557331 ZSCAN32Q9NX65 697 aa11.36□□□□□ -0.59
RDH11-210ENST00000557331 NCDNQ9UBB6 729 aa11.36□□□□□ -0.59
RDH11-210ENST00000557331 A0A1B0GUA9 196 aa11.35□□□□□ -0.59
RDH11-210ENST00000557331 TMEM150BA6NC51 233 aa11.35□□□□□ -0.59
RDH11-210ENST00000557331 INO80B-WBP1J3KQ70 363 aa11.35□□□□□ -0.59
RDH11-210ENST00000557331 M0R2N6 131 aa11.35□□□□□ -0.59
RDH11-210ENST00000557331 ADAMTS3O15072 1205 aa11.35□□□□□ -0.59
RDH11-210ENST00000557331 FOXD2O60548 495 aaPredicted RBP11.35□□□□□ -0.59
RDH11-210ENST00000557331 TSPAN1O60635 241 aa11.35□□□□□ -0.59
RDH11-210ENST00000557331 CDKL5O76039 1030 aa11.35□□□□□ -0.59
RDH11-210ENST00000557331 REC8O95072 547 aa11.35□□□□□ -0.59
RDH11-210ENST00000557331 XRCC6P12956 609 aaKnown RBP eCLIP11.35□□□□□ -0.59
RDH11-210ENST00000557331 HSPA4P34932 840 aa11.35□□□□□ -0.59
RDH11-210ENST00000557331 RPS9P46781 194 aaKnown RBP11.35□□□□□ -0.59
RDH11-210ENST00000557331 SCNN1GP51170 649 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms