RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 COLGALT2Q8IYK4 626 aa18.24■□□□□ 0.51
VSX1-207ENST00000557285 DAW1Q8N136 415 aa18.24■□□□□ 0.51
VSX1-207ENST00000557285 DRC1Q96MC2 740 aa18.24■□□□□ 0.51
VSX1-207ENST00000557285 TMEM175Q9BSA9 504 aa18.24■□□□□ 0.51
VSX1-207ENST00000557285 VN1R3Q9BXE9 311 aa18.24■□□□□ 0.51
VSX1-207ENST00000557285 SNTG2Q9NY99 539 aa18.24■□□□□ 0.51
VSX1-207ENST00000557285 CACNG4Q9UBN1 327 aa18.24■□□□□ 0.51
VSX1-207ENST00000557285 GDAQ9Y2T3 454 aa18.24■□□□□ 0.51
VSX1-207ENST00000557285 USP15Q9Y4E8 981 aaPredicted RBP18.24■□□□□ 0.51
VSX1-207ENST00000557285 NPHP3-ACAD11A0A0J9YXS1 232 aa18.23■□□□□ 0.51
VSX1-207ENST00000557285 F8W810 466 aa18.23■□□□□ 0.51
VSX1-207ENST00000557285 K7ERI5 159 aa18.23■□□□□ 0.51
VSX1-207ENST00000557285 C2CD2LO14523 706 aa18.23■□□□□ 0.51
VSX1-207ENST00000557285 CLASP2O75122 1294 aaKnown RBP18.23■□□□□ 0.51
VSX1-207ENST00000557285 PLA2G4BP0C869 781 aa18.23■□□□□ 0.51
VSX1-207ENST00000557285 UBA7P41226 1012 aa18.23■□□□□ 0.51
VSX1-207ENST00000557285 EFNA5P52803 228 aa18.23■□□□□ 0.51
VSX1-207ENST00000557285 CACNB1Q02641 598 aaPredicted RBP18.23■□□□□ 0.51
VSX1-207ENST00000557285 ZP2Q05996 745 aa18.23■□□□□ 0.51
VSX1-207ENST00000557285 COASYQ13057 564 aa18.23■□□□□ 0.51
VSX1-207ENST00000557285 SMRP1Q8NCR6 262 aa18.23■□□□□ 0.51
VSX1-207ENST00000557285 NT5C3AQ9H0P0 336 aa18.23■□□□□ 0.51
VSX1-207ENST00000557285 EPHX3Q9H6B9 360 aa18.23■□□□□ 0.51
VSX1-207ENST00000557285 KMT5AQ9NQR1 393 aa18.23■□□□□ 0.51
VSX1-207ENST00000557285 CLIC4Q9Y696 253 aa18.23■□□□□ 0.51
VSX1-207ENST00000557285 FSD2A1L4K1 749 aa18.22■□□□□ 0.51
VSX1-207ENST00000557285 CARNS1A5YM72 827 aa18.22■□□□□ 0.51
VSX1-207ENST00000557285 SLC16A4O15374 487 aa18.22■□□□□ 0.51
VSX1-207ENST00000557285 RECQL4O94761 1208 aa18.22■□□□□ 0.51
VSX1-207ENST00000557285 CTSAP10619 480 aa18.22■□□□□ 0.51
VSX1-207ENST00000557285 RESTQ13127 1097 aa18.22■□□□□ 0.51
VSX1-207ENST00000557285 MAPK7Q13164 816 aa18.22■□□□□ 0.51
VSX1-207ENST00000557285 TMEM119Q4V9L6 283 aa18.22■□□□□ 0.51
VSX1-207ENST00000557285 HYIQ5T013 277 aa18.22■□□□□ 0.51
VSX1-207ENST00000557285 NT5DC1Q5TFE4 455 aa18.22■□□□□ 0.51
VSX1-207ENST00000557285 ATF7IP2Q5U623 682 aa18.22■□□□□ 0.51
VSX1-207ENST00000557285 ADHFE1Q8IWW8 467 aa18.22■□□□□ 0.51
VSX1-207ENST00000557285 CALML4Q96GE6 196 aa18.22■□□□□ 0.51
VSX1-207ENST00000557285 MARCH5Q9NX47 278 aa18.22■□□□□ 0.51
VSX1-207ENST00000557285 HCFC2Q9Y5Z7 792 aa18.22■□□□□ 0.51
VSX1-207ENST00000557285 NR1I2O75469 434 aa18.21■□□□□ 0.51
VSX1-207ENST00000557285 BMP15O95972 392 aa18.21■□□□□ 0.51
VSX1-207ENST00000557285 HARSP12081 509 aaKnown RBP18.21■□□□□ 0.51
VSX1-207ENST00000557285 MARCKSP29966 332 aaPredicted RBP18.21■□□□□ 0.51
VSX1-207ENST00000557285 SLC12A3P55017 1021 aa18.21■□□□□ 0.51
VSX1-207ENST00000557285 KARSQ15046 597 aaKnown RBP18.21■□□□□ 0.51
VSX1-207ENST00000557285 SPECC1Q5M775 1068 aa18.21■□□□□ 0.51
VSX1-207ENST00000557285 ANKRD54Q6NXT1 300 aa18.21■□□□□ 0.51
VSX1-207ENST00000557285 TAS1R1Q7RTX1 841 aa18.21■□□□□ 0.51
VSX1-207ENST00000557285 ZBTB33Q86T24 672 aa18.21■□□□□ 0.51
VSX1-207ENST00000557285 SYT2Q8N9I0 419 aaPredicted RBP18.21■□□□□ 0.51
VSX1-207ENST00000557285 GSTCDQ8NEC7 633 aa18.21■□□□□ 0.51
VSX1-207ENST00000557285 AK8Q96MA6 479 aa18.21■□□□□ 0.51
VSX1-207ENST00000557285 CXCL16Q9H2A7 254 aa18.21■□□□□ 0.51
VSX1-207ENST00000557285 CDH22Q9UJ99 828 aa18.21■□□□□ 0.51
VSX1-207ENST00000557285 PHLPP2Q6ZVD8 1323 aa18.21■□□□□ 0.51
VSX1-207ENST00000557285 FAM86C2PA6NEL3 165 aa18.2■□□□□ 0.5
VSX1-207ENST00000557285 CASTOR2A6NHX0 329 aa18.2■□□□□ 0.5
VSX1-207ENST00000557285 INPPL1O15357 1258 aa18.2■□□□□ 0.5
VSX1-207ENST00000557285 PLCG1P19174 1290 aa18.2■□□□□ 0.5
VSX1-207ENST00000557285 SP100P23497 879 aaPredicted RBP18.2■□□□□ 0.5
VSX1-207ENST00000557285 OSTNP61366 133 aa18.2■□□□□ 0.5
VSX1-207ENST00000557285 DSC1Q08554 894 aa18.2■□□□□ 0.5
VSX1-207ENST00000557285 GRIK3Q13003 919 aa18.2■□□□□ 0.5
VSX1-207ENST00000557285 KCNC3Q14003 757 aa18.2■□□□□ 0.5
VSX1-207ENST00000557285 PTPN14Q15678 1187 aa18.2■□□□□ 0.5
VSX1-207ENST00000557285 DCAF4L1Q3SXM0 396 aa18.2■□□□□ 0.5
VSX1-207ENST00000557285 ZNF568Q3ZCX4 644 aa18.2■□□□□ 0.5
VSX1-207ENST00000557285 FOXD4L5Q5VV16 416 aaPredicted RBP18.2■□□□□ 0.5
VSX1-207ENST00000557285 HASPINQ8TF76 798 aa18.2■□□□□ 0.5
VSX1-207ENST00000557285 FOXD4L4Q8WXT5 416 aaPredicted RBP18.2■□□□□ 0.5
VSX1-207ENST00000557285 CASP10Q92851 521 aa18.2■□□□□ 0.5
VSX1-207ENST00000557285 INTS4Q96HW7 963 aaKnown RBP18.2■□□□□ 0.5
VSX1-207ENST00000557285 B3GALT6Q96L58 329 aa18.2■□□□□ 0.5
VSX1-207ENST00000557285 COLEC11Q9BWP8 271 aa18.2■□□□□ 0.5
VSX1-207ENST00000557285 PRKAG3Q9UGI9 489 aa18.2■□□□□ 0.5
VSX1-207ENST00000557285 MTMR6Q9Y217 621 aa18.2■□□□□ 0.5
VSX1-207ENST00000557285 TRIP11Q15643 1979 aa18.19■□□□□ 0.5
VSX1-207ENST00000557285 SPDYE4A6NLX3 237 aa18.19■□□□□ 0.5
VSX1-207ENST00000557285 URODP06132 367 aa18.19■□□□□ 0.5
VSX1-207ENST00000557285 MYBP10242 640 aa18.19■□□□□ 0.5
VSX1-207ENST00000557285 EPCAMP16422 314 aa18.19■□□□□ 0.5
VSX1-207ENST00000557285 GUCY2CP25092 1073 aa18.19■□□□□ 0.5
VSX1-207ENST00000557285 LONP1P36776 959 aaKnown RBP18.19■□□□□ 0.5
VSX1-207ENST00000557285 MCM6Q14566 821 aa18.19■□□□□ 0.5
VSX1-207ENST00000557285 GLRA4Q5JXX5 417 aa18.19■□□□□ 0.5
VSX1-207ENST00000557285 KANK3Q6NY19 840 aa18.19■□□□□ 0.5
VSX1-207ENST00000557285 SYCE2Q6PIF2 218 aa18.19■□□□□ 0.5
VSX1-207ENST00000557285 GPBP1Q86WP2 473 aa18.19■□□□□ 0.5
VSX1-207ENST00000557285 HSCBQ8IWL3 235 aa18.19■□□□□ 0.5
VSX1-207ENST00000557285 C12orf76Q8N812 135 aaPredicted RBP18.19■□□□□ 0.5
VSX1-207ENST00000557285 LRRC15Q8TF66 581 aa18.19■□□□□ 0.5
VSX1-207ENST00000557285 RPGRIP1Q96KN7 1286 aa18.19■□□□□ 0.5
VSX1-207ENST00000557285 POP1Q99575 1024 aaKnown RBP18.19■□□□□ 0.5
VSX1-207ENST00000557285 PAAF1Q9BRP4 392 aa18.19■□□□□ 0.5
VSX1-207ENST00000557285 TARS2Q9BW92 718 aaKnown RBP18.19■□□□□ 0.5
VSX1-207ENST00000557285 MRPL4Q9BYD3 311 aaKnown RBP18.19■□□□□ 0.5
VSX1-207ENST00000557285 ZHX3Q9H4I2 956 aa18.19■□□□□ 0.5
VSX1-207ENST00000557285 MRPL17Q9NRX2 175 aaKnown RBP18.19■□□□□ 0.5
VSX1-207ENST00000557285 PTGESO14684 152 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms