RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 ARHGEF18Q6ZSZ5 1173 aa13.47□□□□□ -0.25
APEX1-216ENST00000557159 NELFCDQ8IXH7 590 aa13.47□□□□□ -0.25
APEX1-216ENST00000557159 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.47□□□□□ -0.25
APEX1-216ENST00000557159 AGBL3Q8NEM8 1001 aa13.47□□□□□ -0.25
APEX1-216ENST00000557159 STK32AQ8WU08 396 aa13.47□□□□□ -0.25
APEX1-216ENST00000557159 ARHGEF2Q92974 986 aaKnown RBP13.47□□□□□ -0.25
APEX1-216ENST00000557159 CEP95Q96GE4 821 aa13.47□□□□□ -0.25
APEX1-216ENST00000557159 CCDC17Q96LX7 622 aa13.47□□□□□ -0.25
APEX1-216ENST00000557159 OSGEPQ9NPF4 335 aa13.47□□□□□ -0.25
APEX1-216ENST00000557159 MTMR4Q9NYA4 1195 aa13.47□□□□□ -0.25
APEX1-216ENST00000557159 CYP39A1Q9NYL5 469 aa13.47□□□□□ -0.25
APEX1-216ENST00000557159 ZBTB12Q9Y330 459 aaPredicted RBP13.47□□□□□ -0.25
APEX1-216ENST00000557159 MROH7Q68CQ1 1323 aa13.47□□□□□ -0.25
APEX1-216ENST00000557159 PASKQ96RG2 1323 aa13.47□□□□□ -0.25
APEX1-216ENST00000557159 LRRD1A4D1F6 860 aa13.46□□□□□ -0.25
APEX1-216ENST00000557159 HNRNPCL1O60812 293 aaKnown RBP13.46□□□□□ -0.25
APEX1-216ENST00000557159 IFNAR2P48551 515 aa13.46□□□□□ -0.25
APEX1-216ENST00000557159 PAPOLAP51003 745 aaKnown RBP13.46□□□□□ -0.25
APEX1-216ENST00000557159 RAB27AP51159 221 aa13.46□□□□□ -0.25
APEX1-216ENST00000557159 SLC18A1P54219 525 aa13.46□□□□□ -0.25
APEX1-216ENST00000557159 SLC12A3P55017 1021 aa13.46□□□□□ -0.25
APEX1-216ENST00000557159 CHADLQ6NUI6 762 aa13.46□□□□□ -0.25
APEX1-216ENST00000557159 PPP1R21Q6ZMI0 780 aa13.46□□□□□ -0.25
APEX1-216ENST00000557159 RGS9BPQ6ZS82 235 aa13.46□□□□□ -0.25
APEX1-216ENST00000557159 GPBP1Q86WP2 473 aa13.46□□□□□ -0.25
APEX1-216ENST00000557159 GALNT15Q8N3T1 639 aa13.46□□□□□ -0.25
APEX1-216ENST00000557159 BORCS6Q96GS4 357 aa13.46□□□□□ -0.25
APEX1-216ENST00000557159 PIGSQ96S52 555 aa13.46□□□□□ -0.25
APEX1-216ENST00000557159 MKNK1Q9BUB5 465 aa13.46□□□□□ -0.25
APEX1-216ENST00000557159 DHX36Q9H2U1 1008 aaKnown RBP13.46□□□□□ -0.25
APEX1-216ENST00000557159 PCDHA12Q9UN75 941 aa13.46□□□□□ -0.25
APEX1-216ENST00000557159 ZNF646O15015 1829 aaPredicted RBP13.46□□□□□ -0.25
APEX1-216ENST00000557159 ADGRA3Q8IWK6 1321 aa13.46□□□□□ -0.25
APEX1-216ENST00000557159 GLTPD2A6NH11 291 aa13.46□□□□□ -0.26
APEX1-216ENST00000557159 NPM3O75607 178 aaKnown RBP13.46□□□□□ -0.26
APEX1-216ENST00000557159 DDNO94850 711 aaPredicted RBP13.46□□□□□ -0.26
APEX1-216ENST00000557159 TPBGLP0DKB5 382 aa13.46□□□□□ -0.26
APEX1-216ENST00000557159 RPS12P25398 132 aaKnown RBP13.46□□□□□ -0.26
APEX1-216ENST00000557159 SLC5A9Q2M3M2 681 aa13.46□□□□□ -0.26
APEX1-216ENST00000557159 ANO7Q6IWH7 933 aa13.46□□□□□ -0.26
APEX1-216ENST00000557159 SYDE1Q6ZW31 735 aaPredicted RBP13.46□□□□□ -0.26
APEX1-216ENST00000557159 PIGOQ8TEQ8 1089 aa13.46□□□□□ -0.26
APEX1-216ENST00000557159 ALG3Q92685 438 aa13.46□□□□□ -0.26
APEX1-216ENST00000557159 TMEM260Q9NX78 707 aa13.46□□□□□ -0.26
APEX1-216ENST00000557159 GCNT4Q9P109 453 aa13.46□□□□□ -0.26
APEX1-216ENST00000557159 DDX25Q9UHL0 483 aaKnown RBP13.46□□□□□ -0.26
APEX1-216ENST00000557159 STARD13Q9Y3M8 1113 aa13.46□□□□□ -0.26
APEX1-216ENST00000557159 A8MUI8 341 aa13.45□□□□□ -0.26
APEX1-216ENST00000557159 PEX11AO75192 247 aa13.45□□□□□ -0.26
APEX1-216ENST00000557159 GOLGA8HP0CJ92 632 aa13.45□□□□□ -0.26
APEX1-216ENST00000557159 SNHG28P0DPA3 235 aa13.45□□□□□ -0.26
APEX1-216ENST00000557159 COILP38432 576 aaPredicted RBP13.45□□□□□ -0.26
APEX1-216ENST00000557159 PEX19P40855 299 aa13.45□□□□□ -0.26
APEX1-216ENST00000557159 CTCFP49711 727 aaPredicted RBP13.45□□□□□ -0.26
APEX1-216ENST00000557159 RASSF2P50749 326 aa13.45□□□□□ -0.26
APEX1-216ENST00000557159 CAV1Q03135 178 aa13.45□□□□□ -0.26
APEX1-216ENST00000557159 PPARDQ03181 441 aa13.45□□□□□ -0.26
APEX1-216ENST00000557159 STRN3Q13033 797 aa13.45□□□□□ -0.26
APEX1-216ENST00000557159 RRP1BQ14684 758 aaKnown RBP13.45□□□□□ -0.26
APEX1-216ENST00000557159 CCDC137Q6PK04 289 aaKnown RBP13.45□□□□□ -0.26
APEX1-216ENST00000557159 MTHFD1LQ6UB35 978 aa13.45□□□□□ -0.26
APEX1-216ENST00000557159 MOXD1Q6UVY6 613 aa13.45□□□□□ -0.26
APEX1-216ENST00000557159 RIBC1Q8N443 379 aaPredicted RBP13.45□□□□□ -0.26
APEX1-216ENST00000557159 KIF2BQ8N4N8 673 aa13.45□□□□□ -0.26
APEX1-216ENST00000557159 ASAP3Q8TDY4 903 aa13.45□□□□□ -0.26
APEX1-216ENST00000557159 PARD3BQ8TEW8 1205 aa13.45□□□□□ -0.26
APEX1-216ENST00000557159 UTP4Q969X6 686 aaKnown RBP13.45□□□□□ -0.26
APEX1-216ENST00000557159 C18orf8Q96DM3 657 aa13.45□□□□□ -0.26
APEX1-216ENST00000557159 ZDHHC15Q96MV8 337 aa13.45□□□□□ -0.26
APEX1-216ENST00000557159 MBOAT7Q96N66 472 aa13.45□□□□□ -0.26
APEX1-216ENST00000557159 TSC22D3Q99576 134 aa13.45□□□□□ -0.26
APEX1-216ENST00000557159 ZSWIM1Q9BR11 485 aa13.45□□□□□ -0.26
APEX1-216ENST00000557159 GLT8D2Q9H1C3 349 aa13.45□□□□□ -0.26
APEX1-216ENST00000557159 WNT8AQ9H1J5 351 aa13.45□□□□□ -0.26
APEX1-216ENST00000557159 LRRC19Q9H756 370 aa13.45□□□□□ -0.26
APEX1-216ENST00000557159 TLE6Q9H808 572 aa13.45□□□□□ -0.26
APEX1-216ENST00000557159 KANSL2Q9H9L4 492 aa13.45□□□□□ -0.26
APEX1-216ENST00000557159 PAPOLBQ9NRJ5 636 aaKnown RBP13.45□□□□□ -0.26
APEX1-216ENST00000557159 KCNG1Q9UIX4 513 aa13.45□□□□□ -0.26
APEX1-216ENST00000557159 PNMA3Q9UL41 463 aa13.45□□□□□ -0.26
APEX1-216ENST00000557159 MTUS1Q9ULD2 1270 aa13.45□□□□□ -0.26
APEX1-216ENST00000557159 GJA3Q9Y6H8 435 aa13.45□□□□□ -0.26
APEX1-216ENST00000557159 IGKV6D-41A0A0C4DH26 115 aa13.44□□□□□ -0.26
APEX1-216ENST00000557159 AKAP3O75969 853 aa13.44□□□□□ -0.26
APEX1-216ENST00000557159 RTN3O95197 1032 aaPredicted RBP13.44□□□□□ -0.26
APEX1-216ENST00000557159 KRT13P13646 458 aa13.44□□□□□ -0.26
APEX1-216ENST00000557159 HOXD13P35453 343 aa13.44□□□□□ -0.26
APEX1-216ENST00000557159 PEX5P50542 639 aa13.44□□□□□ -0.26
APEX1-216ENST00000557159 PRPF4BQ13523 1007 aaKnown RBP13.44□□□□□ -0.26
APEX1-216ENST00000557159 KIF22Q14807 665 aa13.44□□□□□ -0.26
APEX1-216ENST00000557159 TSNAXIP1Q2TAA8 658 aa13.44□□□□□ -0.26
APEX1-216ENST00000557159 ARSHQ5FYA8 562 aa13.44□□□□□ -0.26
APEX1-216ENST00000557159 GPATCH4Q5T3I0 446 aaKnown RBP13.44□□□□□ -0.26
APEX1-216ENST00000557159 RHBDF2Q6PJF5 856 aa13.44□□□□□ -0.26
APEX1-216ENST00000557159 RELL1Q8IUW5 271 aa13.44□□□□□ -0.26
APEX1-216ENST00000557159 KIAA0825Q8IV33 1275 aa13.44□□□□□ -0.26
APEX1-216ENST00000557159 ANKLE1Q8NAG6 615 aa13.44□□□□□ -0.26
APEX1-216ENST00000557159 ETNK1Q9HBU6 452 aa13.44□□□□□ -0.26
APEX1-216ENST00000557159 DBR1Q9UK59 544 aaKnown RBP13.44□□□□□ -0.26
APEX1-216ENST00000557159 AJAP1Q9UKB5 411 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms