RNA–Protein interactions for RNA: ENST00000557024.1

SYNE2-224, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 998 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-224ENST00000557024 GLYCTKQ8IVS8 523 aa10.45□□□□□ -0.74
SYNE2-224ENST00000557024 SPNS2Q8IVW8 549 aa10.45□□□□□ -0.74
SYNE2-224ENST00000557024 TEX2Q8IWB9 1127 aa10.45□□□□□ -0.74
SYNE2-224ENST00000557024 CRYGNQ8WXF5 182 aa10.45□□□□□ -0.74
SYNE2-224ENST00000557024 BORCS6Q96GS4 357 aa10.45□□□□□ -0.74
SYNE2-224ENST00000557024 TMEM87BQ96K49 555 aa10.45□□□□□ -0.74
SYNE2-224ENST00000557024 B3GALT6Q96L58 329 aa10.45□□□□□ -0.74
SYNE2-224ENST00000557024 RSAD1Q9HA92 442 aa10.45□□□□□ -0.74
SYNE2-224ENST00000557024 RXFP1Q9HBX9 757 aa10.45□□□□□ -0.74
SYNE2-224ENST00000557024 ZSWIM6Q9HCJ5 1215 aa10.45□□□□□ -0.74
SYNE2-224ENST00000557024 DISC1Q9NRI5 854 aa10.45□□□□□ -0.74
SYNE2-224ENST00000557024 ZDHHC7Q9NXF8 308 aa10.45□□□□□ -0.74
SYNE2-224ENST00000557024 DAXXQ9UER7 740 aaPredicted RBP10.45□□□□□ -0.74
SYNE2-224ENST00000557024 GMEB2Q9UKD1 530 aa10.45□□□□□ -0.74
SYNE2-224ENST00000557024 SSX2IPQ9Y2D8 614 aa10.45□□□□□ -0.74
SYNE2-224ENST00000557024 RBM8AQ9Y5S9 174 aaKnown RBP10.45□□□□□ -0.74
SYNE2-224ENST00000557024 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.45□□□□□ -0.74
SYNE2-224ENST00000557024 V9GY48 417 aaPredicted RBP10.45□□□□□ -0.74
SYNE2-224ENST00000557024 BAHCC1Q9P281 2608 aa10.45□□□□□ -0.74
SYNE2-224ENST00000557024 C2orf16Q68DN1 1984 aa10.45□□□□□ -0.74
SYNE2-224ENST00000557024 TMEM150BA6NC51 233 aa10.44□□□□□ -0.74
SYNE2-224ENST00000557024 ADAMTS3O15072 1205 aa10.44□□□□□ -0.74
SYNE2-224ENST00000557024 TGM5O43548 720 aa10.44□□□□□ -0.74
SYNE2-224ENST00000557024 CHMP2AO43633 222 aa10.44□□□□□ -0.74
SYNE2-224ENST00000557024 GAS2O43903 313 aaKnown RBP10.44□□□□□ -0.74
SYNE2-224ENST00000557024 CYP3A4P08684 503 aa10.44□□□□□ -0.74
SYNE2-224ENST00000557024 OR1G1P47890 313 aa10.44□□□□□ -0.74
SYNE2-224ENST00000557024 PRKCQQ04759 706 aa10.44□□□□□ -0.74
SYNE2-224ENST00000557024 SPEM2Q0P670 501 aa10.44□□□□□ -0.74
SYNE2-224ENST00000557024 COL9A2Q14055 689 aaPredicted RBP10.44□□□□□ -0.74
SYNE2-224ENST00000557024 TARBP2Q15633 366 aaKnown RBP10.44□□□□□ -0.74
SYNE2-224ENST00000557024 MTERF2Q49AM1 385 aa10.44□□□□□ -0.74
SYNE2-224ENST00000557024 RHPN2Q8IUC4 686 aa10.44□□□□□ -0.74
SYNE2-224ENST00000557024 KSR1Q8IVT5 923 aa10.44□□□□□ -0.74
SYNE2-224ENST00000557024 HDAC7Q8WUI4 952 aa10.44□□□□□ -0.74
SYNE2-224ENST00000557024 NELL1Q92832 810 aa10.44□□□□□ -0.74
SYNE2-224ENST00000557024 NLRP4Q96MN2 994 aa10.44□□□□□ -0.74
SYNE2-224ENST00000557024 SH2D3AQ9BRG2 576 aa10.44□□□□□ -0.74
SYNE2-224ENST00000557024 MTA3Q9BTC8 594 aa10.44□□□□□ -0.74
SYNE2-224ENST00000557024 PRKD2Q9BZL6 878 aa10.44□□□□□ -0.74
SYNE2-224ENST00000557024 PLEKHA4Q9H4M7 779 aa10.44□□□□□ -0.74
SYNE2-224ENST00000557024 LTB4R2Q9NPC1 389 aa10.44□□□□□ -0.74
SYNE2-224ENST00000557024 BARHL2Q9NY43 387 aa10.44□□□□□ -0.74
SYNE2-224ENST00000557024 KANSL3Q9P2N6 904 aa10.44□□□□□ -0.74
SYNE2-224ENST00000557024 SUCLA2Q9P2R7 463 aaPredicted RBP10.44□□□□□ -0.74
SYNE2-224ENST00000557024 SEPT9Q9UHD8 586 aaPredicted RBP10.44□□□□□ -0.74
SYNE2-224ENST00000557024 EVPLQ92817 2033 aa10.43□□□□□ -0.74
SYNE2-224ENST00000557024 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.43□□□□□ -0.74
SYNE2-224ENST00000557024 TBC1D4O60343 1298 aa10.43□□□□□ -0.74
SYNE2-224ENST00000557024 PAPLNO95428 1278 aa10.43□□□□□ -0.74
SYNE2-224ENST00000557024 EFEMP2O95967 443 aa10.43□□□□□ -0.74
SYNE2-224ENST00000557024 TARSP26639 723 aaKnown RBP10.43□□□□□ -0.74
SYNE2-224ENST00000557024 DNM2P50570 870 aa10.43□□□□□ -0.74
SYNE2-224ENST00000557024 NTHL1P78549 312 aa10.43□□□□□ -0.74
SYNE2-224ENST00000557024 CDC42EP1Q00587 391 aa10.43□□□□□ -0.74
SYNE2-224ENST00000557024 DSG1Q02413 1049 aa10.43□□□□□ -0.74
SYNE2-224ENST00000557024 FUT2Q10981 343 aa10.43□□□□□ -0.74
SYNE2-224ENST00000557024 ZBTB41Q5SVQ8 909 aa10.43□□□□□ -0.74
SYNE2-224ENST00000557024 RNF20Q5VTR2 975 aa10.43□□□□□ -0.74
SYNE2-224ENST00000557024 GRASPQ7Z6J2 395 aaPredicted RBP10.43□□□□□ -0.74
SYNE2-224ENST00000557024 MRPL10Q7Z7H8 261 aaKnown RBP10.43□□□□□ -0.74
SYNE2-224ENST00000557024 ZNF410Q86VK4 478 aa10.43□□□□□ -0.74
SYNE2-224ENST00000557024 COLGALT2Q8IYK4 626 aa10.43□□□□□ -0.74
SYNE2-224ENST00000557024 RNF168Q8IYW5 571 aaPredicted RBP10.43□□□□□ -0.74
SYNE2-224ENST00000557024 MAP4K1Q92918 833 aa10.43□□□□□ -0.74
SYNE2-224ENST00000557024 KXD1Q9BQD3 176 aa10.43□□□□□ -0.74
SYNE2-224ENST00000557024 OSBPL6Q9BZF3 934 aa10.43□□□□□ -0.74
SYNE2-224ENST00000557024 INO80BQ9C086 356 aaPredicted RBP10.43□□□□□ -0.74
SYNE2-224ENST00000557024 GLT8D2Q9H1C3 349 aa10.43□□□□□ -0.74
SYNE2-224ENST00000557024 AGPAT5Q9NUQ2 364 aa10.43□□□□□ -0.74
SYNE2-224ENST00000557024 CDH7Q9ULB5 785 aa10.43□□□□□ -0.74
SYNE2-224ENST00000557024 ZFP37Q9Y6Q3 630 aaPredicted RBP10.43□□□□□ -0.74
SYNE2-224ENST00000557024 CACNA1IQ9P0X4 2223 aa10.43□□□□□ -0.74
SYNE2-224ENST00000557024 ATRXP46100 2492 aa10.43□□□□□ -0.74
SYNE2-224ENST00000557024 CNTNAP2Q9UHC6 1331 aa10.42□□□□□ -0.74
SYNE2-224ENST00000557024 FANCMQ8IYD8 2048 aa10.42□□□□□ -0.74
SYNE2-224ENST00000557024 SLC30A4O14863 429 aa10.42□□□□□ -0.74
SYNE2-224ENST00000557024 EPB41L2O43491 1005 aaKnown RBP10.42□□□□□ -0.74
SYNE2-224ENST00000557024 RPL17P18621 184 aaKnown RBP10.42□□□□□ -0.74
SYNE2-224ENST00000557024 MAGEA9P43362 315 aa10.42□□□□□ -0.74
SYNE2-224ENST00000557024 SYNE3Q6ZMZ3 975 aa10.42□□□□□ -0.74
SYNE2-224ENST00000557024 TPRG1Q6ZUI0 275 aa10.42□□□□□ -0.74
SYNE2-224ENST00000557024 MTSS1LQ765P7 747 aa10.42□□□□□ -0.74
SYNE2-224ENST00000557024 NETO1Q8TDF5 533 aa10.42□□□□□ -0.74
SYNE2-224ENST00000557024 FGF13Q92913 245 aa10.42□□□□□ -0.74
SYNE2-224ENST00000557024 GJA10Q969M2 543 aa10.42□□□□□ -0.74
SYNE2-224ENST00000557024 CLDN23Q96B33 292 aa10.42□□□□□ -0.74
SYNE2-224ENST00000557024 LENG9Q96B70 501 aa10.42□□□□□ -0.74
SYNE2-224ENST00000557024 CEP89Q96ST8 783 aa10.42□□□□□ -0.74
SYNE2-224ENST00000557024 UNC45AQ9H3U1 944 aa10.42□□□□□ -0.74
SYNE2-224ENST00000557024 PRMT8Q9NR22 394 aaPredicted RBP10.42□□□□□ -0.74
SYNE2-224ENST00000557024 FAM217BQ9NTX9 383 aaPredicted RBP10.42□□□□□ -0.74
SYNE2-224ENST00000557024 RAB23Q9ULC3 237 aa10.42□□□□□ -0.74
SYNE2-224ENST00000557024 IGKV6-21A0A0C4DH24 114 aa10.41□□□□□ -0.74
SYNE2-224ENST00000557024 ARL5CA6NH57 179 aa10.41□□□□□ -0.74
SYNE2-224ENST00000557024 hCG_1984214I3L0E3 225 aa10.41□□□□□ -0.74
SYNE2-224ENST00000557024 GAS7O60861 476 aa10.41□□□□□ -0.74
SYNE2-224ENST00000557024 PFKPQ01813 784 aa10.41□□□□□ -0.74
SYNE2-224ENST00000557024 DMWDQ09019 674 aa10.41□□□□□ -0.74
SYNE2-224ENST00000557024 MTAPQ13126 283 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms