RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 MRPL14Q6P1L8 145 aaKnown RBP6.57□□□□□ -1.36
ATXN3-245ENST00000556958 MTHFD1LQ6UB35 978 aa6.57□□□□□ -1.36
ATXN3-245ENST00000556958 KBTBD3Q8NAB2 608 aa6.57□□□□□ -1.36
ATXN3-245ENST00000556958 TMEM40Q8WWA1 233 aa6.57□□□□□ -1.36
ATXN3-245ENST00000556958 FAM3CQ92520 227 aa6.57□□□□□ -1.36
ATXN3-245ENST00000556958 DNASE1L2Q92874 299 aa6.57□□□□□ -1.36
ATXN3-245ENST00000556958 FGF13Q92913 245 aa6.57□□□□□ -1.36
ATXN3-245ENST00000556958 ZBTB10Q96DT7 871 aa6.57□□□□□ -1.36
ATXN3-245ENST00000556958 RPS6KC1Q96S38 1066 aa6.57□□□□□ -1.36
ATXN3-245ENST00000556958 USB1Q9BQ65 265 aaKnown RBP6.57□□□□□ -1.36
ATXN3-245ENST00000556958 CLMPQ9H6B4 373 aa6.57□□□□□ -1.36
ATXN3-245ENST00000556958 C1orf115Q9H7X2 142 aa6.57□□□□□ -1.36
ATXN3-245ENST00000556958 DACT1Q9NYF0 836 aa6.57□□□□□ -1.36
ATXN3-245ENST00000556958 ANAPC4Q9UJX5 808 aa6.57□□□□□ -1.36
ATXN3-245ENST00000556958 KLK13Q9UKR3 277 aa6.57□□□□□ -1.36
ATXN3-245ENST00000556958 CCDC163A0A0D9SF12 145 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 SHISA7A6NL88 538 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 C2CD2LO14523 706 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 TEX28O15482 410 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 ADAM23O75077 832 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 RPP40O75818 363 aaKnown RBP6.56□□□□□ -1.36
ATXN3-245ENST00000556958 AKAP3O75969 853 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 RHOBTB1O94844 696 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 CAPNS1P04632 268 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 FGRP09769 529 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 CCDC192P0DO97 292 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 SKIP12755 728 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 SLC26A2P50443 739 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 MRPS9P82933 396 aaKnown RBP6.56□□□□□ -1.36
ATXN3-245ENST00000556958 SCAPQ12770 1279 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 SEMA3FQ13275 785 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 LRRC32Q14392 662 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 ASPRV1Q53RT3 343 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 CCDC178Q5BJE1 867 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 C1orf228Q6PIY5 440 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 GLB1LQ6UWU2 654 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 PLPPR4Q7Z2D5 763 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 FAM228AQ86W67 206 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 TMEM173Q86WV6 379 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-245ENST00000556958 DGKHQ86XP1 1220 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 KIAA0319LQ8IZA0 1049 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 FAM9BQ8IZU0 186 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 GAB3Q8WWW8 586 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 KXD1Q9BQD3 176 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 ZMYND15Q9H091 742 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 JMJD4Q9H9V9 463 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 TMEM9BQ9NQ34 198 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 FAN1Q9Y2M0 1017 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 ASXL3Q9C0F0 2248 aa6.56□□□□□ -1.36
ATXN3-245ENST00000556958 K7ESF4 209 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 CAPN9O14815 690 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 OPLAHO14841 1288 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 KHNYNO15037 678 aaKnown RBP6.55□□□□□ -1.36
ATXN3-245ENST00000556958 MAFGO15525 162 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 HBP1O60381 514 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 XYLBO75191 536 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 CAVIN2O95810 425 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 SOD2P04179 222 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 PRB1P04280 392 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 HNRNPA1P09651 372 aaKnown RBP eCLIP6.55□□□□□ -1.36
ATXN3-245ENST00000556958 SPATA31D3P0C874 917 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 MYBP10242 640 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 SLC11A1P49279 550 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 STAT5BP51692 787 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 SIM1P81133 766 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-245ENST00000556958 ELF2Q15723 593 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 KIZQ2M2Z5 673 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 NOMO2Q5JPE7 1267 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 DGKKQ5KSL6 1271 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 CEP85Q6P2H3 762 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 PDXDC2PQ6P474 469 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 SPATA31D4Q6ZUB0 917 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 GRASPQ7Z6J2 395 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-245ENST00000556958 KBTBD6Q86V97 674 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 PALB2Q86YC2 1186 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 KRTAP1-3Q8IUG1 177 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 TMEM57Q8N5G2 664 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 EHBP1Q8NDI1 1231 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 DEFB124Q8NES8 71 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 TRAPPC12Q8WVT3 735 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 GPRASP2Q96D09 838 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 ZC3H10Q96K80 434 aaKnown RBP6.55□□□□□ -1.36
ATXN3-245ENST00000556958 FAM193BQ96PV7 902 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-245ENST00000556958 OSMRQ99650 979 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 GBP3Q9H0R5 595 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 CPVLQ9H3G5 476 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 SMOC1Q9H4F8 434 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 NRDE2Q9H7Z3 1164 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 BRD9Q9H8M2 597 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 RXFP1Q9HBX9 757 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.55□□□□□ -1.36
ATXN3-245ENST00000556958 KANSL3Q9P2N6 904 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 KCNH3Q9ULD8 1083 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 TELO2Q9Y4R8 837 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 PTPN13Q12923 2485 aa6.55□□□□□ -1.36
ATXN3-245ENST00000556958 FANCMQ8IYD8 2048 aa6.54□□□□□ -1.36
ATXN3-245ENST00000556958 M0R2C6 588 aa6.54□□□□□ -1.36
ATXN3-245ENST00000556958 ZBTB5O15062 677 aa6.54□□□□□ -1.36
ATXN3-245ENST00000556958 ATXN7O15265 892 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-245ENST00000556958 TGM5O43548 720 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms