RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 IFI16Q16666 785 aaKnown RBP10.94□□□□□ -0.66
TMEM260-211ENST00000556648 LY6KQ17RY6 165 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 MAP9Q49MG5 647 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 DCAF12L1Q5VU92 463 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 KRT39Q6A163 491 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 CCDC70Q6NSX1 233 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 SND1Q7KZF4 910 aaKnown RBP eCLIP10.94□□□□□ -0.66
TMEM260-211ENST00000556648 SV2AQ7L0J3 742 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 ZNF771Q7L3S4 317 aaPredicted RBP10.94□□□□□ -0.66
TMEM260-211ENST00000556648 CPNE8Q86YQ8 564 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 GPD1LQ8N335 351 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 TMC2Q8TDI7 906 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 CTNNBL1Q8WYA6 563 aaPredicted RBP10.94□□□□□ -0.66
TMEM260-211ENST00000556648 RIN2Q8WYP3 895 aaPredicted RBP10.94□□□□□ -0.66
TMEM260-211ENST00000556648 AP1M1Q9BXS5 423 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 DHX33Q9H6R0 707 aaKnown RBP10.94□□□□□ -0.66
TMEM260-211ENST00000556648 C17orf75Q9HAS0 396 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 TMEM59LQ9UK28 342 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 FAN1Q9Y2M0 1017 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 NOC2LQ9Y3T9 749 aaKnown RBP10.94□□□□□ -0.66
TMEM260-211ENST00000556648 DAAM1Q9Y4D1 1078 aa10.94□□□□□ -0.66
TMEM260-211ENST00000556648 IGKV6D-21A0A0A0MT36 114 aa10.93□□□□□ -0.66
TMEM260-211ENST00000556648 LRRIQ4A6NIV6 560 aa10.93□□□□□ -0.66
TMEM260-211ENST00000556648 DDX3YO15523 660 aaKnown RBP10.93□□□□□ -0.66
TMEM260-211ENST00000556648 RAD51CO43502 376 aa10.93□□□□□ -0.66
TMEM260-211ENST00000556648 HEXIM1O94992 359 aaKnown RBP10.93□□□□□ -0.66
TMEM260-211ENST00000556648 CCDC172P0C7W6 258 aa10.93□□□□□ -0.66
TMEM260-211ENST00000556648 IREB2P48200 963 aaKnown RBP10.93□□□□□ -0.66
TMEM260-211ENST00000556648 LIG4P49917 911 aa10.93□□□□□ -0.66
TMEM260-211ENST00000556648 GPC3P51654 580 aa10.93□□□□□ -0.66
TMEM260-211ENST00000556648 MOGSQ13724 837 aa10.93□□□□□ -0.66
TMEM260-211ENST00000556648 Q3C1V9 767 aa10.93□□□□□ -0.66
TMEM260-211ENST00000556648 TMEM63BQ5T3F8 832 aa10.93□□□□□ -0.66
TMEM260-211ENST00000556648 C9orf131Q5VYM1 1079 aa10.93□□□□□ -0.66
TMEM260-211ENST00000556648 SCARA3Q6AZY7 606 aa10.93□□□□□ -0.66
TMEM260-211ENST00000556648 TRIM50Q86XT4 487 aa10.93□□□□□ -0.66
TMEM260-211ENST00000556648 TSEN2Q8NCE0 465 aaKnown RBP10.93□□□□□ -0.66
TMEM260-211ENST00000556648 CASKIN2Q8WXE0 1202 aa10.93□□□□□ -0.66
TMEM260-211ENST00000556648 SHC3Q92529 594 aa10.93□□□□□ -0.66
TMEM260-211ENST00000556648 CCDC102AQ96A19 550 aa10.93□□□□□ -0.66
TMEM260-211ENST00000556648 HES6Q96HZ4 224 aa10.93□□□□□ -0.66
TMEM260-211ENST00000556648 PORCNQ9H237 461 aa10.93□□□□□ -0.66
TMEM260-211ENST00000556648 VPS18Q9P253 973 aa10.93□□□□□ -0.66
TMEM260-211ENST00000556648 SUCLA2Q9P2R7 463 aaPredicted RBP10.93□□□□□ -0.66
TMEM260-211ENST00000556648 RNF14Q9UBS8 474 aa10.93□□□□□ -0.66
TMEM260-211ENST00000556648 TTLL13PA6NNM8 815 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 TMEM110-MUSTN1A8MSY1 372 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 PHACTR2O75167 634 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 GGPS1O95749 300 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 SYF2O95926 243 aaKnown RBP10.92□□□□□ -0.66
TMEM260-211ENST00000556648 FTLP02792 175 aaPredicted RBP10.92□□□□□ -0.66
TMEM260-211ENST00000556648 GARTP22102 1010 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 MARK3P27448 753 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 ARL2P36404 184 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 CARSP49589 748 aaKnown RBP10.92□□□□□ -0.66
TMEM260-211ENST00000556648 ACOT2P49753 483 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 FAM193AP78312 1265 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 FMO1Q01740 532 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 GUCY2DQ02846 1103 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 TTLL12Q14166 644 aaPredicted RBP10.92□□□□□ -0.66
TMEM260-211ENST00000556648 SEZ6Q53EL9 994 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 MSL3Q8N5Y2 521 aaKnown RBP10.92□□□□□ -0.66
TMEM260-211ENST00000556648 FBXL13Q8NEE6 735 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 DEPTORQ8TB45 409 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 PBKQ96KB5 322 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 TARS2Q9BW92 718 aaKnown RBP10.92□□□□□ -0.66
TMEM260-211ENST00000556648 RAB20Q9NX57 234 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 FBXO40Q9UH90 709 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 COQ4Q9Y3A0 265 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 ANKRD62A6NC57 917 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 SPDYE5A6NIY4 337 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 AGPSO00116 658 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 CES2O00748 559 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 FAM153BP0C7A2 387 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 GJA5P36382 358 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 MFAP3P55082 362 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 PRPF4BQ13523 1007 aaKnown RBP10.92□□□□□ -0.66
TMEM260-211ENST00000556648 CAPSQ13938 189 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 TARBP2Q15633 366 aaKnown RBP10.92□□□□□ -0.66
TMEM260-211ENST00000556648 FAM153CQ494X1 144 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 BRDTQ58F21 947 aaPredicted RBP10.92□□□□□ -0.66
TMEM260-211ENST00000556648 CRELD2Q6UXH1 353 aaPredicted RBP10.92□□□□□ -0.66
TMEM260-211ENST00000556648 ACTRT1Q8TDG2 376 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 SCFD2Q8WU76 684 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 PSPC1Q8WXF1 523 aaKnown RBP10.92□□□□□ -0.66
TMEM260-211ENST00000556648 NT5C1BQ96P26 610 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 NIFKQ9BYG3 293 aaKnown RBP10.92□□□□□ -0.66
TMEM260-211ENST00000556648 ISCUQ9H1K1 167 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 EPB41L5Q9HCM4 733 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 GDF3Q9NR23 364 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 ANKFY1Q9P2R3 1169 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 FAM153AQ9UHL3 310 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 AMFRQ9UKV5 643 aa10.92□□□□□ -0.66
TMEM260-211ENST00000556648 ZHX1Q9UKY1 873 aaPredicted RBP10.92□□□□□ -0.66
TMEM260-211ENST00000556648 MCM3APO60318 1980 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 A0A0U1RQG5 324 aaPredicted RBP10.91□□□□□ -0.66
TMEM260-211ENST00000556648 PGRMC1O00264 195 aaKnown RBP10.91□□□□□ -0.66
TMEM260-211ENST00000556648 EXTL3O43909 919 aa10.91□□□□□ -0.66
TMEM260-211ENST00000556648 HARSP12081 509 aaKnown RBP10.91□□□□□ -0.66
TMEM260-211ENST00000556648 CYP11B1P15538 503 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms