RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 CTAGE8P0CG41 777 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 STAT6P42226 847 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 TNNI2P48788 182 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 TOB1P50616 345 aaPredicted RBP6.77□□□□□ -1.33
CPSF2-205ENST00000556622 TROAPQ12815 778 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 TRAF1Q13077 416 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 TNFAIP1Q13829 316 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 RASA3Q14644 834 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 TERF2Q15554 542 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 ELF2Q15723 593 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 TMEM266Q2M3C6 531 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 COBLL1Q53SF7 1204 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 CDKAL1Q5VV42 579 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 RRAGBQ5VZM2 374 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 RGMBQ6NW40 437 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 CNNM4Q6P4Q7 775 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 HHIPL2Q6UWX4 724 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 FAM214BQ7L5A3 538 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 ARMC9Q7Z3E5 817 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 CTAGE6Q86UF2 777 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 DZIP1Q86YF9 867 aaKnown RBP6.77□□□□□ -1.33
CPSF2-205ENST00000556622 FMNL3Q8IVF7 1028 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 CTAGE4Q8IX94 777 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 BLIDQ8IZY5 108 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 LCORLQ8N3X6 602 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 DAGLBQ8NCG7 672 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 OR8K1Q8NGG5 319 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 ZNF507Q8TCN5 953 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 CALML4Q96GE6 196 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 PLPPR2Q96GM1 343 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 CLIC6Q96NY7 704 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 NUP88Q99567 741 aaPredicted RBP6.77□□□□□ -1.33
CPSF2-205ENST00000556622 EDEM3Q9BZQ6 932 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 CCSER1Q9C0I3 900 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 FAM107BQ9H098 131 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 MIR1-1HGQ9H1L0 117 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 MKNK2Q9HBH9 465 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 EPB41L4AQ9HCS5 686 aaPredicted RBP6.77□□□□□ -1.33
CPSF2-205ENST00000556622 C6orf50Q9HD87 102 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 MED4Q9NPJ6 270 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 FAM53CQ9NYF3 392 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 PSD3Q9NYI0 1048 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 TMOD2Q9NZR1 351 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 ADD3Q9UEY8 706 aaKnown RBP6.77□□□□□ -1.33
CPSF2-205ENST00000556622 SEC63Q9UGP8 760 aaKnown RBP6.77□□□□□ -1.33
CPSF2-205ENST00000556622 CDC23Q9UJX2 597 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 TLR6Q9Y2C9 796 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 MRFAP1Q9Y605 127 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 CNTNAP1P78357 1384 aa6.77□□□□□ -1.33
CPSF2-205ENST00000556622 MROH7-TTC4A0A0A0MT08 1334 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 ANO9A1A5B4 782 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 USP27XA6NNY8 438 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 RNGTTO60942 597 aaKnown RBP6.76□□□□□ -1.33
CPSF2-205ENST00000556622 MFAP3LO75121 409 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 CILPO75339 1184 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 TADA3O75528 432 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 CLSTN1O94985 981 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 RPN1P04843 607 aaKnown RBP6.76□□□□□ -1.33
CPSF2-205ENST00000556622 CHGBP05060 677 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 IVLP07476 585 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 ATP1A3P13637 1013 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 PRDX5P30044 214 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 MAP2K2P36507 400 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 CHMP4BP1P59074 171 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 FKBP1BP68106 108 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 CDK17Q00537 523 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 MAP2K1Q02750 393 aaPredicted RBP6.76□□□□□ -1.33
CPSF2-205ENST00000556622 RPL6Q02878 288 aaKnown RBP6.76□□□□□ -1.33
CPSF2-205ENST00000556622 CAMK2GQ13555 558 aaPredicted RBP6.76□□□□□ -1.33
CPSF2-205ENST00000556622 SPA17Q15506 151 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 ERCC6LQ2NKX8 1250 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 CYP27C1Q4G0S4 372 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 FIGNQ5HY92 759 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 NBPF12Q5TAG4 269 aaPredicted RBP6.76□□□□□ -1.33
CPSF2-205ENST00000556622 APOBEC3HQ6NTF7 200 aaKnown RBP6.76□□□□□ -1.33
CPSF2-205ENST00000556622 LILRA6Q6PI73 481 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 TRIM65Q6PJ69 517 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 MOB2Q70IA6 237 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 ZNF765Q7L2R6 523 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 RELL1Q8IUW5 271 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.76□□□□□ -1.33
CPSF2-205ENST00000556622 REXO1L1PQ8IX06 675 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 ENAHQ8N8S7 591 aaPredicted RBP6.76□□□□□ -1.33
CPSF2-205ENST00000556622 TC2NQ8N9U0 490 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 HHIPL1Q96JK4 782 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 ZDHHC15Q96MV8 337 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 NAPGQ99747 312 aaPredicted RBP6.76□□□□□ -1.33
CPSF2-205ENST00000556622 RIOK1Q9BRS2 568 aaKnown RBP6.76□□□□□ -1.33
CPSF2-205ENST00000556622 USP40Q9NVE5 1235 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 RNF14Q9UBS8 474 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 KCNJ14Q9UNX9 436 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 PCDHB6Q9Y5E3 794 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 PPP2R3BQ9Y5P8 575 aa6.76□□□□□ -1.33
CPSF2-205ENST00000556622 A0A1B0GUL6 1792 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 PVALEFA0A1B0GWK0 134 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 A0A1W2PQJ5 194 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 TARSL2A2RTX5 802 aaKnown RBP6.75□□□□□ -1.33
CPSF2-205ENST00000556622 VWA3AA6NCI4 1184 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 KCNJ18B7U540 433 aa6.75□□□□□ -1.33
CPSF2-205ENST00000556622 PRRG2O14669 202 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms