RNA–Protein interactions for RNA: ENST00000556517.1

ABCD4-225, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 947 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-225ENST00000556517 TRAIPQ9BWF2 469 aa13.66□□□□□ -0.22
ABCD4-225ENST00000556517 OSBPL7Q9BZF2 842 aa13.66□□□□□ -0.22
ABCD4-225ENST00000556517 CDT1Q9H211 546 aa13.66□□□□□ -0.22
ABCD4-225ENST00000556517 TSPYL2Q9H2G4 693 aaPredicted RBP13.66□□□□□ -0.22
ABCD4-225ENST00000556517 SEMA6BQ9H3T3 888 aa13.66□□□□□ -0.22
ABCD4-225ENST00000556517 KIAA1586Q9HCI6 787 aa13.66□□□□□ -0.22
ABCD4-225ENST00000556517 RGS18Q9NS28 235 aa13.66□□□□□ -0.22
ABCD4-225ENST00000556517 FAM105AQ9NUU6 356 aa13.66□□□□□ -0.22
ABCD4-225ENST00000556517 HSPBP1Q9NZL4 362 aa13.66□□□□□ -0.22
ABCD4-225ENST00000556517 FRMD4BQ9Y2L6 1034 aa13.66□□□□□ -0.22
ABCD4-225ENST00000556517 PCDHB2Q9Y5E7 798 aa13.66□□□□□ -0.22
ABCD4-225ENST00000556517 STYXL1Q9Y6J8 313 aa13.66□□□□□ -0.22
ABCD4-225ENST00000556517 ALPK3Q96L96 1907 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 TRIM49BA6NDI0 452 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 BECN2A8MW95 431 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 TULP1O00294 542 aaPredicted RBP13.65□□□□□ -0.22
ABCD4-225ENST00000556517 CETN3O15182 167 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 CLIC2O15247 247 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 OGTO15294 1046 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 FGBP02675 491 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 ACRP10323 421 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 IBSPP21815 317 aaPredicted RBP13.65□□□□□ -0.22
ABCD4-225ENST00000556517 STX17P56962 302 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 ZNF445P59923 1031 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 TPM4P67936 248 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 MYL5Q02045 173 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 ADAM9Q13443 819 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 MYBPC2Q14324 1141 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 DSC3Q14574 896 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 NFIL3Q16649 462 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 ZCWPW2Q504Y3 356 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 EEF1DP3Q658K8 133 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 CEP135Q66GS9 1140 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 ANKRD40Q6AI12 368 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 C11orf57Q6ZUT1 292 aaPredicted RBP13.65□□□□□ -0.22
ABCD4-225ENST00000556517 THNSL1Q8IYQ7 743 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 GPD1LQ8N335 351 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 XXYLT1Q8NBI6 393 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 RNF169Q8NCN4 708 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 PGBD4Q96DM1 585 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 ZBTB45Q96K62 511 aaPredicted RBP13.65□□□□□ -0.22
ABCD4-225ENST00000556517 BPIFA3Q9BQP9 254 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 FUCA2Q9BTY2 467 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 IKZF4Q9H2S9 585 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 PCIF1Q9H4Z3 704 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 PTPRHQ9HD43 1115 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 TOPORSQ9NS56 1045 aaPredicted RBP13.65□□□□□ -0.22
ABCD4-225ENST00000556517 LRFN2Q9ULH4 789 aa13.65□□□□□ -0.22
ABCD4-225ENST00000556517 MKI67P46013 3256 aaKnown RBP13.65□□□□□ -0.22
ABCD4-225ENST00000556517 A0A0U1RQF3 1178 aa13.64□□□□□ -0.23
ABCD4-225ENST00000556517 ZBBXA8MT70 800 aa13.64□□□□□ -0.23
ABCD4-225ENST00000556517 EXTL3O43909 919 aa13.64□□□□□ -0.23
ABCD4-225ENST00000556517 MGEA5O60502 916 aa13.64□□□□□ -0.23
ABCD4-225ENST00000556517 AMHP03971 560 aa13.64□□□□□ -0.23
ABCD4-225ENST00000556517 CLTAP09496 248 aa13.64□□□□□ -0.23
ABCD4-225ENST00000556517 STAG3L1P0CL83 205 aa13.64□□□□□ -0.23
ABCD4-225ENST00000556517 EPB41P11171 864 aaKnown RBP13.64□□□□□ -0.23
ABCD4-225ENST00000556517 ADSSP30520 456 aa13.64□□□□□ -0.23
ABCD4-225ENST00000556517 RGS19P49795 217 aa13.64□□□□□ -0.23
ABCD4-225ENST00000556517 PMS1P54277 932 aaKnown RBP13.64□□□□□ -0.23
ABCD4-225ENST00000556517 OSTNP61366 133 aa13.64□□□□□ -0.23
ABCD4-225ENST00000556517 TTI2Q6NXR4 508 aa13.64□□□□□ -0.23
ABCD4-225ENST00000556517 OTOP2Q7RTS6 562 aa13.64□□□□□ -0.23
ABCD4-225ENST00000556517 USP37Q86T82 979 aa13.64□□□□□ -0.23
ABCD4-225ENST00000556517 SLC9A9Q8IVB4 645 aa13.64□□□□□ -0.23
ABCD4-225ENST00000556517 FAM114A1Q8IWE2 563 aa13.64□□□□□ -0.23
ABCD4-225ENST00000556517 TMEM174Q8WUU8 243 aa13.64□□□□□ -0.23
ABCD4-225ENST00000556517 SAAL1Q96ER3 474 aa13.64□□□□□ -0.23
ABCD4-225ENST00000556517 FAM213AQ9BRX8 229 aa13.64□□□□□ -0.23
ABCD4-225ENST00000556517 APOL6Q9BWW8 343 aa13.64□□□□□ -0.23
ABCD4-225ENST00000556517 EIF2AQ9BY44 585 aaKnown RBP13.64□□□□□ -0.23
ABCD4-225ENST00000556517 IPPQ9Y573 584 aa13.64□□□□□ -0.23
ABCD4-225ENST00000556517 PCDHB7Q9Y5E2 793 aa13.64□□□□□ -0.23
ABCD4-225ENST00000556517 ZNF233A6NK53 670 aa13.63□□□□□ -0.23
ABCD4-225ENST00000556517 SMTNL1A8MU46 457 aa13.63□□□□□ -0.23
ABCD4-225ENST00000556517 GOLGA6L19H0YKK7 550 aa13.63□□□□□ -0.23
ABCD4-225ENST00000556517 ENPP3O14638 875 aa13.63□□□□□ -0.23
ABCD4-225ENST00000556517 ABLIM1O14639 778 aa13.63□□□□□ -0.23
ABCD4-225ENST00000556517 SLC16A3O15427 465 aaKnown RBP13.63□□□□□ -0.23
ABCD4-225ENST00000556517 HOXA2O43364 376 aa13.63□□□□□ -0.23
ABCD4-225ENST00000556517 GNA14O95837 355 aa13.63□□□□□ -0.23
ABCD4-225ENST00000556517 EOMESO95936 686 aa13.63□□□□□ -0.23
ABCD4-225ENST00000556517 ITGA4P13612 1032 aa13.63□□□□□ -0.23
ABCD4-225ENST00000556517 PSMC2P35998 433 aaKnown RBP13.63□□□□□ -0.23
ABCD4-225ENST00000556517 GRM5P41594 1212 aa13.63□□□□□ -0.23
ABCD4-225ENST00000556517 MAGEA10P43363 369 aaPredicted RBP13.63□□□□□ -0.23
ABCD4-225ENST00000556517 ACOT2P49753 483 aa13.63□□□□□ -0.23
ABCD4-225ENST00000556517 MLLT1Q03111 559 aaPredicted RBP13.63□□□□□ -0.23
ABCD4-225ENST00000556517 SNRNP35Q16560 246 aaKnown RBP13.63□□□□□ -0.23
ABCD4-225ENST00000556517 UBXN11Q5T124 520 aa13.63□□□□□ -0.23
ABCD4-225ENST00000556517 SPATA1Q5VX52 437 aa13.63□□□□□ -0.23
ABCD4-225ENST00000556517 ZNF365Q70YC5 407 aa13.63□□□□□ -0.23
ABCD4-225ENST00000556517 ECHDC2Q86YB7 292 aa13.63□□□□□ -0.23
ABCD4-225ENST00000556517 ABI1Q8IZP0 508 aa13.63□□□□□ -0.23
ABCD4-225ENST00000556517 AOPEPQ8N6M6 819 aa13.63□□□□□ -0.23
ABCD4-225ENST00000556517 ENOX1Q8TC92 643 aaKnown RBP13.63□□□□□ -0.23
ABCD4-225ENST00000556517 CEP63Q96MT8 703 aa13.63□□□□□ -0.23
ABCD4-225ENST00000556517 ACAP3Q96P50 834 aa13.63□□□□□ -0.23
ABCD4-225ENST00000556517 NXF3Q9H4D5 531 aaKnown RBP13.63□□□□□ -0.23
ABCD4-225ENST00000556517 RPF1Q9H9Y2 349 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms