RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 DEAF1O75398 565 aaPredicted RBP6.66□□□□□ -1.34
TDP1-215ENST00000556498 SLITRK3O94933 977 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 EPN2O95208 641 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 SNX4O95219 450 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 PCNAP12004 261 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 PORP16435 677 aaPredicted RBP6.66□□□□□ -1.34
TDP1-215ENST00000556498 CTRB1P17538 263 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 RXRAP19793 462 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 CASTP20810 708 aaKnown RBP6.66□□□□□ -1.34
TDP1-215ENST00000556498 NME2P22392 152 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 NFKBIAP25963 317 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 SERPINB6P35237 376 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 CHKAP35790 457 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 ECE1P42892 770 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 PLTPP55058 493 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 EVCP57679 992 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 RPS26P62854 115 aaKnown RBP6.66□□□□□ -1.34
TDP1-215ENST00000556498 RACK1P63244 317 aaKnown RBP6.66□□□□□ -1.34
TDP1-215ENST00000556498 ITGB3BPQ13352 177 aaPredicted RBP6.66□□□□□ -1.34
TDP1-215ENST00000556498 PWP1Q13610 501 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 STK38Q15208 465 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 ADRM1Q16186 407 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 MAP3K11Q16584 847 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 CFAP221Q4G0U5 840 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 DEPDC1Q5TB30 811 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 SNX30Q5VWJ9 437 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 CTRB2Q6GPI1 263 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 OTUD7BQ6GQQ9 843 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 TTBK2Q6IQ55 1244 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 ERAP2Q6P179 960 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 KLC3Q6P597 504 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 USP48Q86UV5 1035 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 SLC51BQ86UW2 128 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 OSTM1Q86WC4 334 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 ZNF354CQ86Y25 554 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 RHOT2Q8IXI1 618 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 FAM9CQ8IZT9 166 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 GALNT11Q8NCW6 608 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 SHCBP1Q8NEM2 672 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 CAGE1Q8TC20 777 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 KLHDC7BQ96G42 594 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 HIC2Q96JB3 615 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 TMEM74Q96NL1 305 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 COQ7Q99807 217 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 CCDC28BQ9BUN5 200 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 EDEM3Q9BZQ6 932 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 L2HGDHQ9H9P8 463 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 C8orf4Q9NR00 106 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 KBTBD4Q9NVX7 518 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 SIRT5Q9NXA8 310 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 EHD2Q9NZN4 543 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 ZNF215Q9UL58 517 aaPredicted RBP6.66□□□□□ -1.34
TDP1-215ENST00000556498 SAMM50Q9Y512 469 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 ASB3Q9Y575 518 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 CAPN7Q9Y6W3 813 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 VIRMAQ69YN4 1812 aaKnown RBP6.66□□□□□ -1.34
TDP1-215ENST00000556498 WDR62O43379 1518 aa6.66□□□□□ -1.34
TDP1-215ENST00000556498 LOC105371267A0A1B0GV96 52 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 ARHGAP10A1A4S6 786 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 WDR91A4D1P6 747 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.65□□□□□ -1.34
TDP1-215ENST00000556498 RTCAO00442 366 aaKnown RBP6.65□□□□□ -1.34
TDP1-215ENST00000556498 ZBTB43O43298 467 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 TSPAN6O43657 245 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 TOMM70O94826 608 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 OR5F1O95221 314 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 P4HA1P13674 534 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 ARNTP27540 789 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 EVI2BP34910 448 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 PSMC2P35998 433 aaKnown RBP6.65□□□□□ -1.34
TDP1-215ENST00000556498 ABCG1P45844 678 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 STT3AP46977 705 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 SARSP49591 514 aaKnown RBP6.65□□□□□ -1.34
TDP1-215ENST00000556498 RPP38P78345 283 aaKnown RBP6.65□□□□□ -1.34
TDP1-215ENST00000556498 S100A12P80511 92 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 DNAJC3Q13217 504 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 CUL1Q13616 776 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 CYLC2Q14093 348 aaPredicted RBP6.65□□□□□ -1.34
TDP1-215ENST00000556498 ELF2Q15723 593 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 STK11Q15831 433 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 CLUL1Q15846 466 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 ARL13BQ3SXY8 428 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 SUPT20HL1Q3ZLR7 823 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 CMPK2Q5EBM0 449 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 TTC39AQ5SRH9 613 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 MCTP1Q6DN14 999 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 TTC23LQ6PF05 361 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 AGMOQ6ZNB7 445 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 PALM2Q8IXS6 379 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 ZNF654Q8IZM8 581 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 SUPT20HQ8NEM7 779 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 ENKURQ8TC29 256 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 STK35Q8TDR2 534 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 NOC3LQ8WTT2 800 aaKnown RBP6.65□□□□□ -1.34
TDP1-215ENST00000556498 HNRNPLLQ8WVV9 542 aaKnown RBP6.65□□□□□ -1.34
TDP1-215ENST00000556498 P3H4Q92791 437 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 FATE1Q969F0 183 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 EFHD2Q96C19 240 aaPredicted RBP6.65□□□□□ -1.34
TDP1-215ENST00000556498 ANKRD36BP1Q96IX9 119 aa6.65□□□□□ -1.34
TDP1-215ENST00000556498 TMX3Q96JJ7 454 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms