RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 SPG21Q9NZD8 308 aa12.71□□□□□ -0.37
SLIRP-205ENST00000556310 NCOR1O75376 2440 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 CSPG5O95196 566 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 YEATS4O95619 227 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 PLS3P13797 630 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 LIG1P18858 919 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 MLH1P40692 756 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 ALDH7A1P49419 539 aaKnown RBP12.7□□□□□ -0.38
SLIRP-205ENST00000556310 BCAR1P56945 870 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 RAD51AP2Q09MP3 1159 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 COL19A1Q14993 1142 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 STK38Q15208 465 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 TMEM132AQ24JP5 1023 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 ARSHQ5FYA8 562 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 USP49Q70CQ1 688 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 GPBP1Q86WP2 473 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 LINC00301Q8NCQ3 95 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 SPIRE2Q8WWL2 714 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 MRPS27Q92552 414 aaKnown RBP12.7□□□□□ -0.38
SLIRP-205ENST00000556310 LARP4BQ92615 738 aaKnown RBP12.7□□□□□ -0.38
SLIRP-205ENST00000556310 PPP2R3CQ969Q6 453 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 EPSTI1Q96J88 318 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 CLIC6Q96NY7 704 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 ASB2Q96Q27 587 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 ADPGKQ9BRR6 497 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 TMEM134Q9H6X4 195 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 NRDE2Q9H7Z3 1164 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 UBE2ZQ9H832 354 aaPredicted RBP12.7□□□□□ -0.38
SLIRP-205ENST00000556310 KANSL3Q9P2N6 904 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 STK17AQ9UEE5 414 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 CCDC39Q9UFE4 941 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 KCNG1Q9UIX4 513 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 ODF2LQ9ULJ1 636 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 GIT1Q9Y2X7 761 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 RBM19Q9Y4C8 960 aaKnown RBP12.7□□□□□ -0.38
SLIRP-205ENST00000556310 HES2Q9Y543 173 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 PCDHGA4Q9Y5G9 962 aa12.7□□□□□ -0.38
SLIRP-205ENST00000556310 ARL5CA6NH57 179 aa12.69□□□□□ -0.38
SLIRP-205ENST00000556310 K7ERI5 159 aa12.69□□□□□ -0.38
SLIRP-205ENST00000556310 NCK2O43639 380 aa12.69□□□□□ -0.38
SLIRP-205ENST00000556310 B4GALT3O60512 393 aa12.69□□□□□ -0.38
SLIRP-205ENST00000556310 IRS1P35568 1242 aa12.69□□□□□ -0.38
SLIRP-205ENST00000556310 AFF1P51825 1210 aaKnown RBP12.69□□□□□ -0.38
SLIRP-205ENST00000556310 TFF2Q03403 129 aa12.69□□□□□ -0.38
SLIRP-205ENST00000556310 KRT17Q04695 432 aa12.69□□□□□ -0.38
SLIRP-205ENST00000556310 PKP1Q13835 747 aa12.69□□□□□ -0.38
SLIRP-205ENST00000556310 MCM6Q14566 821 aa12.69□□□□□ -0.38
SLIRP-205ENST00000556310 DCAF4L1Q3SXM0 396 aa12.69□□□□□ -0.38
SLIRP-205ENST00000556310 SPECC1Q5M775 1068 aa12.69□□□□□ -0.38
SLIRP-205ENST00000556310 ATF7IP2Q5U623 682 aa12.69□□□□□ -0.38
SLIRP-205ENST00000556310 FOXD4L5Q5VV16 416 aaPredicted RBP12.69□□□□□ -0.38
SLIRP-205ENST00000556310 EEF1DP3Q658K8 133 aa12.69□□□□□ -0.38
SLIRP-205ENST00000556310 PDE12Q6L8Q7 609 aaKnown RBP12.69□□□□□ -0.38
SLIRP-205ENST00000556310 APBB1IPQ7Z5R6 666 aaPredicted RBP12.69□□□□□ -0.38
SLIRP-205ENST00000556310 FOXD4L4Q8WXT5 416 aaPredicted RBP12.69□□□□□ -0.38
SLIRP-205ENST00000556310 PABPC5Q96DU9 382 aaKnown RBP12.69□□□□□ -0.38
SLIRP-205ENST00000556310 TMEM169Q96HH4 297 aa12.69□□□□□ -0.38
SLIRP-205ENST00000556310 GAD1Q99259 594 aa12.69□□□□□ -0.38
SLIRP-205ENST00000556310 REEP2Q9BRK0 252 aa12.69□□□□□ -0.38
SLIRP-205ENST00000556310 NTPCRQ9BSD7 190 aaKnown RBP12.69□□□□□ -0.38
SLIRP-205ENST00000556310 APOL6Q9BWW8 343 aa12.69□□□□□ -0.38
SLIRP-205ENST00000556310 LARSQ9P2J5 1176 aaKnown RBP12.69□□□□□ -0.38
SLIRP-205ENST00000556310 PUF60Q9UHX1 559 aaKnown RBP12.69□□□□□ -0.38
SLIRP-205ENST00000556310 CITO14578 2027 aa12.69□□□□□ -0.38
SLIRP-205ENST00000556310 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.68□□□□□ -0.38
SLIRP-205ENST00000556310 NPHP3-ACAD11A0A0J9YXS1 232 aa12.68□□□□□ -0.38
SLIRP-205ENST00000556310 SFI1A8K8P3 1242 aa12.68□□□□□ -0.38
SLIRP-205ENST00000556310 H0YCG3 227 aa12.68□□□□□ -0.38
SLIRP-205ENST00000556310 FSCN2O14926 492 aa12.68□□□□□ -0.38
SLIRP-205ENST00000556310 SPTLC2O15270 562 aa12.68□□□□□ -0.38
SLIRP-205ENST00000556310 SLC16A4O15374 487 aa12.68□□□□□ -0.38
SLIRP-205ENST00000556310 PPP6R2O75170 966 aa12.68□□□□□ -0.38
SLIRP-205ENST00000556310 POMCP01189 267 aa12.68□□□□□ -0.38
SLIRP-205ENST00000556310 GALTP07902 379 aa12.68□□□□□ -0.38
SLIRP-205ENST00000556310 HOXB3P14651 431 aaPredicted RBP12.68□□□□□ -0.38
SLIRP-205ENST00000556310 SLC11A1P49279 550 aa12.68□□□□□ -0.38
SLIRP-205ENST00000556310 SCNN1GP51170 649 aa12.68□□□□□ -0.38
SLIRP-205ENST00000556310 ZNF131P52739 623 aa12.68□□□□□ -0.38
SLIRP-205ENST00000556310 SMTNP53814 917 aa12.68□□□□□ -0.38
SLIRP-205ENST00000556310 HYAL1Q12794 435 aa12.68□□□□□ -0.38
SLIRP-205ENST00000556310 DHX8Q14562 1220 aaKnown RBP12.68□□□□□ -0.38
SLIRP-205ENST00000556310 NT5DC1Q5TFE4 455 aa12.68□□□□□ -0.38
SLIRP-205ENST00000556310 ATL3Q6DD88 541 aa12.68□□□□□ -0.38
SLIRP-205ENST00000556310 TAS1R3Q7RTX0 852 aa12.68□□□□□ -0.38
SLIRP-205ENST00000556310 TMEM173Q86WV6 379 aaPredicted RBP12.68□□□□□ -0.38
SLIRP-205ENST00000556310 ZNF280BQ86YH2 543 aa12.68□□□□□ -0.38
SLIRP-205ENST00000556310 TMEM161BQ8NDZ6 487 aa12.68□□□□□ -0.38
SLIRP-205ENST00000556310 KCNN1Q92952 543 aa12.68□□□□□ -0.38
SLIRP-205ENST00000556310 ZFP42Q96MM3 310 aa12.68□□□□□ -0.38
SLIRP-205ENST00000556310 TMEM175Q9BSA9 504 aa12.68□□□□□ -0.38
SLIRP-205ENST00000556310 MRPL4Q9BYD3 311 aaKnown RBP12.68□□□□□ -0.38
SLIRP-205ENST00000556310 GBP3Q9H0R5 595 aa12.68□□□□□ -0.38
SLIRP-205ENST00000556310 DNAJB4Q9UDY4 337 aa12.68□□□□□ -0.38
SLIRP-205ENST00000556310 TNFSF13BQ9Y275 285 aa12.68□□□□□ -0.38
SLIRP-205ENST00000556310 USP20Q9Y2K6 914 aa12.68□□□□□ -0.38
SLIRP-205ENST00000556310 TRIP11Q15643 1979 aa12.68□□□□□ -0.38
SLIRP-205ENST00000556310 BDP1A6H8Y1 2624 aa12.68□□□□□ -0.38
SLIRP-205ENST00000556310 PDCD11Q14690 1871 aaKnown RBP12.68□□□□□ -0.38
SLIRP-205ENST00000556310 TCF20Q9UGU0 1960 aaKnown RBP12.67□□□□□ -0.38
SLIRP-205ENST00000556310 FSD2A1L4K1 749 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms