RNA–Protein interactions for RNA: ENST00000556284.1

MTHFD1-213, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-213ENST00000556284 ATF7IP2Q5U623 682 aa11□□□□□ -0.65
MTHFD1-213ENST00000556284 SLFN12LQ6IEE8 588 aa11□□□□□ -0.65
MTHFD1-213ENST00000556284 C11orf57Q6ZUT1 292 aaPredicted RBP11□□□□□ -0.65
MTHFD1-213ENST00000556284 PARP9Q8IXQ6 854 aa11□□□□□ -0.65
MTHFD1-213ENST00000556284 ENOX1Q8TC92 643 aaKnown RBP11□□□□□ -0.65
MTHFD1-213ENST00000556284 TMEM40Q8WWA1 233 aa11□□□□□ -0.65
MTHFD1-213ENST00000556284 ACO2Q99798 780 aaKnown RBP11□□□□□ -0.65
MTHFD1-213ENST00000556284 TARS2Q9BW92 718 aaKnown RBP11□□□□□ -0.65
MTHFD1-213ENST00000556284 KRTAP3-3Q9BYR6 98 aa11□□□□□ -0.65
MTHFD1-213ENST00000556284 KRTAP3-2Q9BYR7 98 aa11□□□□□ -0.65
MTHFD1-213ENST00000556284 ST3GAL5Q9UNP4 418 aa11□□□□□ -0.65
MTHFD1-213ENST00000556284 CTNND2Q9UQB3 1225 aa11□□□□□ -0.65
MTHFD1-213ENST00000556284 TRAF3IP3Q9Y228 551 aa11□□□□□ -0.65
MTHFD1-213ENST00000556284 TNFSF13BQ9Y275 285 aa11□□□□□ -0.65
MTHFD1-213ENST00000556284 NOC2LQ9Y3T9 749 aaKnown RBP11□□□□□ -0.65
MTHFD1-213ENST00000556284 STYXL1Q9Y6J8 313 aa11□□□□□ -0.65
MTHFD1-213ENST00000556284 CNTNAP2Q9UHC6 1331 aa11□□□□□ -0.65
MTHFD1-213ENST00000556284 A0A1B0GUA9 196 aa10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 BHMG1C9JSJ3 638 aaPredicted RBP10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 N4BP3O15049 544 aa10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 KIAA0391O15091 583 aaKnown RBP10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 FGFR1OPO95684 399 aaKnown RBP10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 GHRP10912 638 aa10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 GARTP22102 1010 aa10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 RPL13P26373 211 aaKnown RBP10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 RFC2P35250 354 aa10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 LIG4P49917 911 aa10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 PAK2Q13177 524 aa10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 HSP90AA2PQ14568 343 aaPredicted RBP10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 TMEM132AQ24JP5 1023 aa10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 ZCWPW2Q504Y3 356 aa10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 ANKRD40Q6AI12 368 aa10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 TTI2Q6NXR4 508 aa10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 NOTUMQ6P988 496 aa10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 APBB1IPQ7Z5R6 666 aaPredicted RBP10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 FAM228AQ86W67 206 aa10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 SLC9A9Q8IVB4 645 aa10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 C12orf56Q8IXR9 622 aa10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 CCDC51Q96ER9 411 aa10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 AGO3Q9H9G7 860 aaKnown RBP10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 PTPRHQ9HD43 1115 aa10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 ERVK-5Q9HDB9 667 aa10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 CHST12Q9NRB3 414 aa10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 AGPAT3Q9NRZ7 376 aa10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 AGPAT5Q9NUQ2 364 aa10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 PADI3Q9ULW8 664 aa10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 MYH11P35749 1972 aa10.99□□□□□ -0.65
MTHFD1-213ENST00000556284 A0A0B4J269 797 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 TRIM43BA6NCK2 446 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 SMTNL1A8MU46 457 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 ANKRD63C9JTQ0 380 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 IKBKBO14920 756 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 CLDN3O15551 220 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 CXCL10P02778 98 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 EDN1P05305 212 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 RAG1P15918 1043 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 ARF4P18085 180 aaPredicted RBP10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 FGFR4P22455 802 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 PROZP22891 400 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 HOXA11P31270 313 aaPredicted RBP10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 CD52P31358 61 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 CYP2C18P33260 490 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 PMS1P54277 932 aaKnown RBP10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 STX17P56962 302 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 FKBP3Q00688 224 aaKnown RBP10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 MCL1Q07820 350 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 NFX1Q12986 1120 aaKnown RBP10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 MBTPS1Q14703 1052 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 SPATA1Q5VX52 437 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 SLC39A4Q6P5W5 647 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 MPZL3Q6UWV2 235 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 LAPTM4BQ86VI4 370 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 FAM200AQ8TCP9 573 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 NOC3LQ8WTT2 800 aaKnown RBP10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 SEPT8Q92599 483 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 TRIM43Q96BQ3 446 aaPredicted RBP10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 DUSP9Q99956 384 aaKnown RBP10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 ADPGKQ9BRR6 497 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 TCHPQ9BT92 498 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 PPP1R12CQ9BZL4 782 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 KDM4CQ9H3R0 1056 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 PDZD7Q9H5P4 517 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 PRDM5Q9NQX1 630 aaPredicted RBP10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 DMAC2Q9NW81 257 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 PRKAG2Q9UGJ0 569 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 UMODL1Q5DID0 1318 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 ZMYM2Q9UBW7 1377 aa10.98□□□□□ -0.65
MTHFD1-213ENST00000556284 TRIM49BA6NDI0 452 aa10.97□□□□□ -0.65
MTHFD1-213ENST00000556284 BECN2A8MW95 431 aa10.97□□□□□ -0.65
MTHFD1-213ENST00000556284 CETN3O15182 167 aa10.97□□□□□ -0.65
MTHFD1-213ENST00000556284 CLIC2O15247 247 aa10.97□□□□□ -0.65
MTHFD1-213ENST00000556284 B4GALT5O43286 388 aa10.97□□□□□ -0.65
MTHFD1-213ENST00000556284 HRO43593 1189 aa10.97□□□□□ -0.65
MTHFD1-213ENST00000556284 NBNO60934 754 aa10.97□□□□□ -0.65
MTHFD1-213ENST00000556284 LDHAP00338 332 aaKnown RBP10.97□□□□□ -0.65
MTHFD1-213ENST00000556284 NR3C1P04150 777 aa10.97□□□□□ -0.65
MTHFD1-213ENST00000556284 MCF2P10911 925 aa10.97□□□□□ -0.65
MTHFD1-213ENST00000556284 ZSCAN20P17040 1043 aaPredicted RBP10.97□□□□□ -0.65
MTHFD1-213ENST00000556284 ADSSP30520 456 aa10.97□□□□□ -0.65
MTHFD1-213ENST00000556284 CCL23P55773 120 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms