RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 APBB1IPQ7Z5R6 666 aaPredicted RBP16.69■□□□□ 0.26
ACTN1-217ENST00000556203 MICAL1Q8TDZ2 1067 aa16.69■□□□□ 0.26
ACTN1-217ENST00000556203 MRPS27Q92552 414 aaKnown RBP16.69■□□□□ 0.26
ACTN1-217ENST00000556203 ACO2Q99798 780 aaKnown RBP16.69■□□□□ 0.26
ACTN1-217ENST00000556203 TLR9Q9NR96 1032 aa16.69■□□□□ 0.26
ACTN1-217ENST00000556203 MIOSQ9NXC5 875 aa16.69■□□□□ 0.26
ACTN1-217ENST00000556203 SNTG2Q9NY99 539 aa16.69■□□□□ 0.26
ACTN1-217ENST00000556203 DNAJB4Q9UDY4 337 aa16.69■□□□□ 0.26
ACTN1-217ENST00000556203 PUF60Q9UHX1 559 aaKnown RBP16.69■□□□□ 0.26
ACTN1-217ENST00000556203 LZTS1Q9Y250 596 aa16.69■□□□□ 0.26
ACTN1-217ENST00000556203 MYMKA6NI61 221 aa16.68■□□□□ 0.26
ACTN1-217ENST00000556203 K7ENM7 598 aa16.68■□□□□ 0.26
ACTN1-217ENST00000556203 TRAK2O60296 914 aa16.68■□□□□ 0.26
ACTN1-217ENST00000556203 SLC11A1P49279 550 aa16.68■□□□□ 0.26
ACTN1-217ENST00000556203 KRT85P78386 507 aa16.68■□□□□ 0.26
ACTN1-217ENST00000556203 HAUS6Q7Z4H7 955 aa16.68■□□□□ 0.26
ACTN1-217ENST00000556203 TMEM173Q86WV6 379 aaPredicted RBP16.68■□□□□ 0.26
ACTN1-217ENST00000556203 GSTCDQ8NEC7 633 aa16.68■□□□□ 0.26
ACTN1-217ENST00000556203 DDX12PQ92771 950 aa16.68■□□□□ 0.26
ACTN1-217ENST00000556203 HLA-CQ95604 372 aa16.68■□□□□ 0.26
ACTN1-217ENST00000556203 DHX58Q96C10 678 aa16.68■□□□□ 0.26
ACTN1-217ENST00000556203 PTPRHQ9HD43 1115 aa16.68■□□□□ 0.26
ACTN1-217ENST00000556203 RCOR1Q9UKL0 485 aa16.68■□□□□ 0.26
ACTN1-217ENST00000556203 PCDHGC5Q9Y5F6 944 aa16.68■□□□□ 0.26
ACTN1-217ENST00000556203 KIAA1671Q9BY89 1806 aa16.68■□□□□ 0.26
ACTN1-217ENST00000556203 CARNS1A5YM72 827 aa16.67■□□□□ 0.26
ACTN1-217ENST00000556203 RECQL4O94761 1208 aa16.67■□□□□ 0.26
ACTN1-217ENST00000556203 ERVFC1P60507 584 aa16.67■□□□□ 0.26
ACTN1-217ENST00000556203 ZNF568Q3ZCX4 644 aa16.67■□□□□ 0.26
ACTN1-217ENST00000556203 ZBTB33Q86T24 672 aa16.67■□□□□ 0.26
ACTN1-217ENST00000556203 FAM178BQ8IXR5 827 aa16.67■□□□□ 0.26
ACTN1-217ENST00000556203 TMEM169Q96HH4 297 aa16.67■□□□□ 0.26
ACTN1-217ENST00000556203 IGSF21Q96ID5 467 aa16.67■□□□□ 0.26
ACTN1-217ENST00000556203 RPS6KC1Q96S38 1066 aa16.67■□□□□ 0.26
ACTN1-217ENST00000556203 TMEM175Q9BSA9 504 aa16.67■□□□□ 0.26
ACTN1-217ENST00000556203 TCHPQ9BT92 498 aa16.67■□□□□ 0.26
ACTN1-217ENST00000556203 CDT1Q9H211 546 aa16.67■□□□□ 0.26
ACTN1-217ENST00000556203 FAM13BQ9NYF5 915 aa16.67■□□□□ 0.26
ACTN1-217ENST00000556203 COG5Q9UP83 839 aa16.67■□□□□ 0.26
ACTN1-217ENST00000556203 GDAQ9Y2T3 454 aa16.67■□□□□ 0.26
ACTN1-217ENST00000556203 ATP6V1DQ9Y5K8 247 aa16.67■□□□□ 0.26
ACTN1-217ENST00000556203 MYH15Q9Y2K3 1946 aa16.66■□□□□ 0.26
ACTN1-217ENST00000556203 ZMYM2Q9UBW7 1377 aa16.66■□□□□ 0.26
ACTN1-217ENST00000556203 ABLIM1O14639 778 aa16.66■□□□□ 0.26
ACTN1-217ENST00000556203 FSCN2O14926 492 aa16.66■□□□□ 0.26
ACTN1-217ENST00000556203 ALDH2P05091 517 aa16.66■□□□□ 0.26
ACTN1-217ENST00000556203 HARSP12081 509 aaKnown RBP16.66■□□□□ 0.26
ACTN1-217ENST00000556203 PROZP22891 400 aa16.66■□□□□ 0.26
ACTN1-217ENST00000556203 NMT1P30419 496 aaKnown RBP16.66■□□□□ 0.26
ACTN1-217ENST00000556203 TFF2Q03403 129 aa16.66■□□□□ 0.26
ACTN1-217ENST00000556203 DSC1Q08554 894 aa16.66■□□□□ 0.26
ACTN1-217ENST00000556203 GRIK3Q13003 919 aa16.66■□□□□ 0.26
ACTN1-217ENST00000556203 E2F4Q16254 413 aa16.66■□□□□ 0.26
ACTN1-217ENST00000556203 PLPP4Q5VZY2 271 aa16.66■□□□□ 0.26
ACTN1-217ENST00000556203 MPZL3Q6UWV2 235 aa16.66■□□□□ 0.26
ACTN1-217ENST00000556203 ZPBP2Q6X784 338 aa16.66■□□□□ 0.26
ACTN1-217ENST00000556203 ADGRD2Q7Z7M1 963 aa16.66■□□□□ 0.26
ACTN1-217ENST00000556203 SFR1Q86XK3 245 aa16.66■□□□□ 0.26
ACTN1-217ENST00000556203 COLGALT2Q8IYK4 626 aa16.66■□□□□ 0.26
ACTN1-217ENST00000556203 IQUBQ8NA54 791 aa16.66■□□□□ 0.26
ACTN1-217ENST00000556203 BCL7CQ8WUZ0 217 aaPredicted RBP16.66■□□□□ 0.26
ACTN1-217ENST00000556203 LEO1Q8WVC0 666 aaPredicted RBP16.66■□□□□ 0.26
ACTN1-217ENST00000556203 ATXN2LQ8WWM7 1075 aaKnown RBP16.66■□□□□ 0.26
ACTN1-217ENST00000556203 KCNN1Q92952 543 aa16.66■□□□□ 0.26
ACTN1-217ENST00000556203 PPP2R3CQ969Q6 453 aa16.66■□□□□ 0.26
ACTN1-217ENST00000556203 BICD1Q96G01 975 aa16.66■□□□□ 0.26
ACTN1-217ENST00000556203 SPATA32Q96LK8 384 aa16.66■□□□□ 0.26
ACTN1-217ENST00000556203 FIZ1Q96SL8 496 aa16.66■□□□□ 0.26
ACTN1-217ENST00000556203 TCF25Q9BQ70 676 aa16.66■□□□□ 0.26
ACTN1-217ENST00000556203 ENTPD7Q9NQZ7 604 aa16.66■□□□□ 0.26
ACTN1-217ENST00000556203 ANKFY1Q9P2R3 1169 aa16.66■□□□□ 0.26
ACTN1-217ENST00000556203 TBX20Q9UMR3 447 aa16.66■□□□□ 0.26
ACTN1-217ENST00000556203 FAN1Q9Y2M0 1017 aa16.66■□□□□ 0.26
ACTN1-217ENST00000556203 NRP1O14786 923 aa16.65■□□□□ 0.26
ACTN1-217ENST00000556203 TOM1L1O75674 476 aa16.65■□□□□ 0.26
ACTN1-217ENST00000556203 MCF2P10911 925 aa16.65■□□□□ 0.26
ACTN1-217ENST00000556203 SCP2P22307 547 aa16.65■□□□□ 0.26
ACTN1-217ENST00000556203 GTF2F1P35269 517 aaKnown RBP eCLIP16.65■□□□□ 0.26
ACTN1-217ENST00000556203 GRM5P41594 1212 aa16.65■□□□□ 0.26
ACTN1-217ENST00000556203 OR1G1P47890 313 aa16.65■□□□□ 0.26
ACTN1-217ENST00000556203 OSTNP61366 133 aa16.65■□□□□ 0.26
ACTN1-217ENST00000556203 MRPS5P82675 430 aaKnown RBP16.65■□□□□ 0.26
ACTN1-217ENST00000556203 HYAL1Q12794 435 aa16.65■□□□□ 0.26
ACTN1-217ENST00000556203 RESP18Q5W5W9 173 aa16.65■□□□□ 0.26
ACTN1-217ENST00000556203 PDE12Q6L8Q7 609 aaKnown RBP16.65■□□□□ 0.26
ACTN1-217ENST00000556203 EP400NLQ6ZTU2 488 aa16.65■□□□□ 0.26
ACTN1-217ENST00000556203 CEP120Q8N960 986 aa16.65■□□□□ 0.26
ACTN1-217ENST00000556203 STAMQ92783 540 aa16.65■□□□□ 0.26
ACTN1-217ENST00000556203 DNAJC19Q96DA6 116 aa16.65■□□□□ 0.26
ACTN1-217ENST00000556203 ZBTB45Q96K62 511 aaPredicted RBP16.65■□□□□ 0.26
ACTN1-217ENST00000556203 CCDC94Q9BW85 323 aaPredicted RBP16.65■□□□□ 0.26
ACTN1-217ENST00000556203 CXCL16Q9H2A7 254 aa16.65■□□□□ 0.26
ACTN1-217ENST00000556203 TNMDQ9H2S6 317 aa16.65■□□□□ 0.26
ACTN1-217ENST00000556203 CUEDC2Q9H467 287 aa16.65■□□□□ 0.26
ACTN1-217ENST00000556203 IGFLR1Q9H665 355 aa16.65■□□□□ 0.26
ACTN1-217ENST00000556203 UBE2ZQ9H832 354 aaPredicted RBP16.65■□□□□ 0.26
ACTN1-217ENST00000556203 PRG3Q9Y2Y8 225 aaPredicted RBP16.65■□□□□ 0.26
ACTN1-217ENST00000556203 POLR2DO15514 142 aaKnown RBP16.64■□□□□ 0.25
ACTN1-217ENST00000556203 IDEP14735 1019 aa16.64■□□□□ 0.25
ACTN1-217ENST00000556203 GAP43P17677 238 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms